RNA–Protein interactions for RNA: ENST00000541764.5

LMO3-227, Transcript of LIM domain only 3, humanhuman

TSL 1 (best)

Gene LMO3, Length 1,489 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-227ENST00000541764 VPS13CQ709C8 3753 aa7.26□□□□□ -1.25
LMO3-227ENST00000541764 COL12A1Q99715 3063 aa7.26□□□□□ -1.25
LMO3-227ENST00000541764 TRAV25A0A0B4J276 109 aa7.26□□□□□ -1.25
LMO3-227ENST00000541764 IGKV3-20P01619 116 aa7.26□□□□□ -1.25
LMO3-227ENST00000541764 RBMY1A1P0DJD3 496 aaKnown RBP7.26□□□□□ -1.25
LMO3-227ENST00000541764 RBMY1CP0DJD4 496 aa7.26□□□□□ -1.25
LMO3-227ENST00000541764 UBE2D1P51668 147 aa7.26□□□□□ -1.25
LMO3-227ENST00000541764 SLURP1P55000 103 aa7.26□□□□□ -1.25
LMO3-227ENST00000541764 RPL39P62891 51 aaKnown RBP7.26□□□□□ -1.25
LMO3-227ENST00000541764 RBMY1FQ15415 496 aaKnown RBP7.26□□□□□ -1.25
LMO3-227ENST00000541764 ZNF479Q96JC4 524 aa7.26□□□□□ -1.25
LMO3-227ENST00000541764 DUX5Q96PT3 197 aa7.26□□□□□ -1.25
LMO3-227ENST00000541764 CR1P17927 2039 aa7.26□□□□□ -1.25
LMO3-227ENST00000541764 ZFHX3Q15911 3703 aa7.25□□□□□ -1.25
LMO3-227ENST00000541764 F8W1H4 67 aa7.25□□□□□ -1.25
LMO3-227ENST00000541764 K7ERJ3 54 aa7.25□□□□□ -1.25
LMO3-227ENST00000541764 M0R2P5 195 aa7.25□□□□□ -1.25
LMO3-227ENST00000541764 PRB1P04280 392 aa7.25□□□□□ -1.25
LMO3-227ENST00000541764 DEFB131AP59861 70 aa7.25□□□□□ -1.25
LMO3-227ENST00000541764 KRTAP10-9P60411 292 aa7.25□□□□□ -1.25
LMO3-227ENST00000541764 BEAN1Q3B7T3 259 aa7.25□□□□□ -1.25
LMO3-227ENST00000541764 FAM74A4Q5TZK3 123 aa7.25□□□□□ -1.25
LMO3-227ENST00000541764 ZNRF2Q8NHG8 242 aa7.25□□□□□ -1.25
LMO3-227ENST00000541764 NAA38Q9BRA0 125 aaKnown RBP7.25□□□□□ -1.25
LMO3-227ENST00000541764 SPXQ9BT56 116 aa7.25□□□□□ -1.25
LMO3-227ENST00000541764 A0A0J9YY99 117 aa7.24□□□□□ -1.25
LMO3-227ENST00000541764 RBMY1BA6NDE4 496 aaKnown RBP7.24□□□□□ -1.25
LMO3-227ENST00000541764 RBMY1EA6NEQ0 496 aaKnown RBP7.24□□□□□ -1.25
LMO3-227ENST00000541764 KNCNA6PVL3 124 aa7.24□□□□□ -1.25
LMO3-227ENST00000541764 G3V4G9 280 aa7.24□□□□□ -1.25
LMO3-227ENST00000541764 RHODO00212 210 aa7.24□□□□□ -1.25
LMO3-227ENST00000541764 RBMY1DP0C7P1 496 aaKnown RBP7.24□□□□□ -1.25
LMO3-227ENST00000541764 ZNF415Q09FC8 603 aa7.24□□□□□ -1.25
LMO3-227ENST00000541764 DEFB114Q30KQ6 69 aa7.24□□□□□ -1.25
LMO3-227ENST00000541764 AMELXQ99217 191 aa7.24□□□□□ -1.25
LMO3-227ENST00000541764 FLNCQ14315 2725 aa7.24□□□□□ -1.25
LMO3-227ENST00000541764 LEPROTO15243 131 aa7.24□□□□□ -1.25
LMO3-227ENST00000541764 SCGB2A2Q13296 93 aa7.24□□□□□ -1.25
LMO3-227ENST00000541764 CD300EQ496F6 205 aaPredicted RBP7.24□□□□□ -1.25
LMO3-227ENST00000541764 C18orf65Q6ZTR6 163 aa7.24□□□□□ -1.25
LMO3-227ENST00000541764 TMEM61Q8N0U2 210 aa7.24□□□□□ -1.25
LMO3-227ENST00000541764 SLC25A29Q8N8R3 303 aa7.24□□□□□ -1.25
LMO3-227ENST00000541764 DNAJC30Q96LL9 226 aa7.24□□□□□ -1.25
LMO3-227ENST00000541764 Q96MF0 132 aa7.24□□□□□ -1.25
LMO3-227ENST00000541764 MAP6D1Q9H9H5 199 aa7.24□□□□□ -1.25
LMO3-227ENST00000541764 CELSR1Q9NYQ6 3014 aa7.23□□□□□ -1.25
LMO3-227ENST00000541764 IGLV4-3A0A075B6K6 122 aa7.23□□□□□ -1.25
LMO3-227ENST00000541764 TMEM223A0PJW6 202 aa7.23□□□□□ -1.25
LMO3-227ENST00000541764 J3QQQ9 107 aa7.23□□□□□ -1.25
LMO3-227ENST00000541764 FHL3Q13643 280 aa7.23□□□□□ -1.25
LMO3-227ENST00000541764 SCGB1D4Q6XE38 83 aa7.23□□□□□ -1.25
LMO3-227ENST00000541764 C11orf72Q8NBR9 251 aa7.23□□□□□ -1.25
LMO3-227ENST00000541764 PLEKHB2Q96CS7 222 aa7.23□□□□□ -1.25
LMO3-227ENST00000541764 IGHV3-30P01768 117 aa7.22□□□□□ -1.25
LMO3-227ENST00000541764 IGHV3-30-5P0DP03 117 aa7.22□□□□□ -1.25
LMO3-227ENST00000541764 DEFB136Q30KP8 78 aa7.22□□□□□ -1.25
LMO3-227ENST00000541764 Q6ZSV7 163 aa7.22□□□□□ -1.25
LMO3-227ENST00000541764 RAX2Q96IS3 184 aa7.22□□□□□ -1.25
LMO3-227ENST00000541764 DUX3Q96PT4 197 aa7.22□□□□□ -1.25
LMO3-227ENST00000541764 SPANXA1Q9NS26 97 aa7.22□□□□□ -1.25
LMO3-227ENST00000541764 UBR5O95071 2799 aaPredicted RBP7.22□□□□□ -1.25
LMO3-227ENST00000541764 FBN2P35556 2912 aa7.22□□□□□ -1.25
LMO3-227ENST00000541764 RS1O15537 224 aa7.21□□□□□ -1.26
LMO3-227ENST00000541764 SAP30O75446 220 aa7.21□□□□□ -1.26
LMO3-227ENST00000541764 INSP01308 110 aa7.21□□□□□ -1.26
LMO3-227ENST00000541764 IGHV3-53P01767 116 aa7.21□□□□□ -1.26
LMO3-227ENST00000541764 ZNF22P17026 224 aaPredicted RBP7.21□□□□□ -1.26
LMO3-227ENST00000541764 PCP4P48539 62 aa7.21□□□□□ -1.26
LMO3-227ENST00000541764 TSPEAR-AS2P59090 65 aa7.21□□□□□ -1.26
LMO3-227ENST00000541764 MRPS36P82909 103 aaKnown RBP7.21□□□□□ -1.26
LMO3-227ENST00000541764 SRSF9Q13242 221 aaKnown RBP eCLIP7.21□□□□□ -1.26
LMO3-227ENST00000541764 TMEM170BQ5T4T1 132 aa7.21□□□□□ -1.26
LMO3-227ENST00000541764 CFAP126Q5VTH2 177 aa7.21□□□□□ -1.26
LMO3-227ENST00000541764 KLHL30-AS1Q8NEE0 82 aa7.21□□□□□ -1.26
LMO3-227ENST00000541764 DYNLRB2Q8TF09 96 aa7.21□□□□□ -1.26
LMO3-227ENST00000541764 FAM104AQ969W3 186 aa7.21□□□□□ -1.26
LMO3-227ENST00000541764 VPS25Q9BRG1 176 aa7.21□□□□□ -1.26
LMO3-227ENST00000541764 VCX2Q9H322 139 aa7.21□□□□□ -1.26
LMO3-227ENST00000541764 ACACBO00763 2458 aa7.2□□□□□ -1.26
LMO3-227ENST00000541764 CELSR2Q9HCU4 2923 aa7.2□□□□□ -1.26
LMO3-227ENST00000541764 LGALS3P17931 250 aaKnown RBP7.2□□□□□ -1.26
LMO3-227ENST00000541764 RNF151Q2KHN1 245 aa7.2□□□□□ -1.26
LMO3-227ENST00000541764 LYRM7Q5U5X0 104 aa7.2□□□□□ -1.26
LMO3-227ENST00000541764 PRO0461Q9UI25 63 aa7.2□□□□□ -1.26
LMO3-227ENST00000541764 TNFRSF18Q9Y5U5 241 aa7.2□□□□□ -1.26
LMO3-227ENST00000541764 AGRNO00468 2067 aa7.2□□□□□ -1.26
LMO3-227ENST00000541764 ANKRD17O75179 2603 aaKnown RBP7.2□□□□□ -1.26
LMO3-227ENST00000541764 USP9YO00507 2555 aaPredicted RBP7.19□□□□□ -1.26
LMO3-227ENST00000541764 DOPEY2Q9Y3R5 2298 aa7.19□□□□□ -1.26
LMO3-227ENST00000541764 CMC4P56277 68 aaPredicted RBP7.19□□□□□ -1.26
LMO3-227ENST00000541764 UBE2D3P61077 147 aa7.19□□□□□ -1.26
LMO3-227ENST00000541764 UBE2D2P62837 147 aa7.19□□□□□ -1.26
LMO3-227ENST00000541764 IL17DQ8TAD2 202 aa7.19□□□□□ -1.26
LMO3-227ENST00000541764 TIMM21Q9BVV7 248 aa7.19□□□□□ -1.26
LMO3-227ENST00000541764 EMP1P54849 157 aa7.18□□□□□ -1.26
LMO3-227ENST00000541764 NDUFA11Q86Y39 141 aa7.18□□□□□ -1.26
LMO3-227ENST00000541764 LINC01587Q99440 93 aa7.18□□□□□ -1.26
LMO3-227ENST00000541764 OPRPNQ99935 248 aaPredicted RBP7.18□□□□□ -1.26
LMO3-227ENST00000541764 FAM110AQ9BQ89 295 aa7.18□□□□□ -1.26
LMO3-227ENST00000541764 CHCHD7Q9BUK0 85 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms