RNA–Protein interactions for RNA: ENST00000541416.5

SNHG1-216, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 996 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-216ENST00000541416 RBX1P62877 108 aa7.83□□□□□ -1.16
SNHG1-216ENST00000541416 CIRBPQ14011 172 aaKnown RBP7.83□□□□□ -1.16
SNHG1-216ENST00000541416 CLPSL2Q6UWE3 100 aa7.83□□□□□ -1.16
SNHG1-216ENST00000541416 AQP10Q96PS8 301 aa7.83□□□□□ -1.16
SNHG1-216ENST00000541416 DERL1Q9BUN8 251 aa7.83□□□□□ -1.16
SNHG1-216ENST00000541416 BORCS7-ASMTA0A0B4J1R7 106 aa7.82□□□□□ -1.16
SNHG1-216ENST00000541416 FAM74A7A6NL05 159 aa7.82□□□□□ -1.16
SNHG1-216ENST00000541416 PANO1I0J062 215 aa7.82□□□□□ -1.16
SNHG1-216ENST00000541416 GZMBP10144 247 aa7.82□□□□□ -1.16
SNHG1-216ENST00000541416 PRR27Q6MZM9 219 aa7.82□□□□□ -1.16
SNHG1-216ENST00000541416 VAX2Q9UIW0 290 aa7.82□□□□□ -1.16
SNHG1-216ENST00000541416 IGHV1-24A0A0C4DH33 117 aa7.81□□□□□ -1.16
SNHG1-216ENST00000541416 TRBV6-1A0A0K0K1D8 114 aa7.81□□□□□ -1.16
SNHG1-216ENST00000541416 LTAP01374 205 aa7.81□□□□□ -1.16
SNHG1-216ENST00000541416 CXCL1P09341 107 aa7.81□□□□□ -1.16
SNHG1-216ENST00000541416 REG3AQ06141 175 aa7.81□□□□□ -1.16
SNHG1-216ENST00000541416 GAGE6Q13070 117 aa7.81□□□□□ -1.16
SNHG1-216ENST00000541416 SPANXN1Q5VSR9 72 aa7.81□□□□□ -1.16
SNHG1-216ENST00000541416 INO80EQ8NBZ0 244 aaPredicted RBP7.81□□□□□ -1.16
SNHG1-216ENST00000541416 A0A087WYN8 130 aa7.8□□□□□ -1.16
SNHG1-216ENST00000541416 AKR1C8PQ5T2L2 129 aa7.8□□□□□ -1.16
SNHG1-216ENST00000541416 STOML3Q8TAV4 291 aa7.8□□□□□ -1.16
SNHG1-216ENST00000541416 IGLV10-54A0A075B6I4 117 aa7.79□□□□□ -1.16
SNHG1-216ENST00000541416 H7C1H1 209 aa7.79□□□□□ -1.16
SNHG1-216ENST00000541416 S100A9P06702 114 aaKnown RBP7.79□□□□□ -1.16
SNHG1-216ENST00000541416 AKR1C3P42330 323 aa7.79□□□□□ -1.16
SNHG1-216ENST00000541416 FHITP49789 147 aa7.79□□□□□ -1.16
SNHG1-216ENST00000541416 IQCJQ1A5X6 159 aa7.79□□□□□ -1.16
SNHG1-216ENST00000541416 CST9LP1Q5W188 147 aa7.79□□□□□ -1.16
SNHG1-216ENST00000541416 WDR73Q6P4I2 378 aa7.79□□□□□ -1.16
SNHG1-216ENST00000541416 KRTAP26-1Q6PEX3 210 aa7.79□□□□□ -1.16
SNHG1-216ENST00000541416 NTM-AS1Q6ZSK4 140 aa7.79□□□□□ -1.16
SNHG1-216ENST00000541416 OR10AG1Q8NH19 301 aa7.79□□□□□ -1.16
SNHG1-216ENST00000541416 SPACA4Q8TDM5 124 aa7.79□□□□□ -1.16
SNHG1-216ENST00000541416 AP1S3Q96PC3 154 aa7.79□□□□□ -1.16
SNHG1-216ENST00000541416 PHOX2AO14813 284 aa7.78□□□□□ -1.16
SNHG1-216ENST00000541416 OR5AL1P0C617 328 aa7.78□□□□□ -1.16
SNHG1-216ENST00000541416 IFITM3Q01628 133 aa7.78□□□□□ -1.16
SNHG1-216ENST00000541416 ZNF726P1Q15940 193 aa7.78□□□□□ -1.16
SNHG1-216ENST00000541416 CFAP161Q6P656 301 aa7.78□□□□□ -1.16
SNHG1-216ENST00000541416 LINC01600Q96MT4 127 aa7.78□□□□□ -1.16
SNHG1-216ENST00000541416 PLAC8Q9NZF1 115 aa7.78□□□□□ -1.16
SNHG1-216ENST00000541416 MAP1LC3B2A6NCE7 125 aa7.77□□□□□ -1.17
SNHG1-216ENST00000541416 SNAI2O43623 268 aa7.77□□□□□ -1.17
SNHG1-216ENST00000541416 RPL7L1Q6DKI1 246 aaKnown RBP7.77□□□□□ -1.17
SNHG1-216ENST00000541416 MAP1LC3BQ9GZQ8 125 aa7.77□□□□□ -1.17
SNHG1-216ENST00000541416 A0A1B0GUV1 79 aa7.76□□□□□ -1.17
SNHG1-216ENST00000541416 UBE2L6O14933 153 aa7.76□□□□□ -1.17
SNHG1-216ENST00000541416 CHTF8P0CG12 524 aa7.76□□□□□ -1.17
SNHG1-216ENST00000541416 GTSF1Q8WW33 167 aa7.76□□□□□ -1.17
SNHG1-216ENST00000541416 TMEM243Q9BU79 118 aa7.76□□□□□ -1.17
SNHG1-216ENST00000541416 SSBP4Q9BWG4 385 aaPredicted RBP7.76□□□□□ -1.17
SNHG1-216ENST00000541416 PKIGQ9Y2B9 76 aa7.76□□□□□ -1.17
SNHG1-216ENST00000541416 KIF25-AS1Q9Y6Z4 181 aa7.76□□□□□ -1.17
SNHG1-216ENST00000541416 SULT1A2P50226 295 aa7.75□□□□□ -1.17
SNHG1-216ENST00000541416 REG3GQ6UW15 175 aa7.75□□□□□ -1.17
SNHG1-216ENST00000541416 MED28Q9H204 178 aa7.75□□□□□ -1.17
SNHG1-216ENST00000541416 PFDN1O60925 122 aa7.74□□□□□ -1.17
SNHG1-216ENST00000541416 NDUFS6O75380 124 aaKnown RBP7.74□□□□□ -1.17
SNHG1-216ENST00000541416 RPS10P46783 165 aaKnown RBP7.74□□□□□ -1.17
SNHG1-216ENST00000541416 RAB5CP51148 216 aa7.74□□□□□ -1.17
SNHG1-216ENST00000541416 SSTP61278 116 aa7.74□□□□□ -1.17
SNHG1-216ENST00000541416 COX6A2Q02221 97 aa7.74□□□□□ -1.17
SNHG1-216ENST00000541416 MAJINQ3KP22 176 aa7.74□□□□□ -1.17
SNHG1-216ENST00000541416 BAGE2Q86Y30 109 aa7.74□□□□□ -1.17
SNHG1-216ENST00000541416 C20orf203Q8NBC4 194 aa7.74□□□□□ -1.17
SNHG1-216ENST00000541416 ALG5Q9Y673 324 aa7.74□□□□□ -1.17
SNHG1-216ENST00000541416 MUC21A0A0G2JKD1 596 aa7.73□□□□□ -1.17
SNHG1-216ENST00000541416 A0A0J9YXV3 536 aa7.73□□□□□ -1.17
SNHG1-216ENST00000541416 MUC21A0A140T8X8 626 aa7.73□□□□□ -1.17
SNHG1-216ENST00000541416 MGPP08493 103 aa7.73□□□□□ -1.17
SNHG1-216ENST00000541416 PRR3P79522 188 aaKnown RBP7.73□□□□□ -1.17
SNHG1-216ENST00000541416 LINC00474Q9P2X8 69 aa7.73□□□□□ -1.17
SNHG1-216ENST00000541416 FXYD6-FXYD2A0A087WZ82 144 aa7.72□□□□□ -1.17
SNHG1-216ENST00000541416 M0QY20 66 aa7.72□□□□□ -1.17
SNHG1-216ENST00000541416 SLPIP03973 132 aa7.72□□□□□ -1.17
SNHG1-216ENST00000541416 GIPP09681 153 aaPredicted RBP7.72□□□□□ -1.17
SNHG1-216ENST00000541416 SPINK6Q6UWN8 80 aa7.72□□□□□ -1.17
SNHG1-216ENST00000541416 PGLYRP4Q96LB8 373 aa7.72□□□□□ -1.17
SNHG1-216ENST00000541416 IGLV4-60A0A075B6I1 120 aa7.71□□□□□ -1.18
SNHG1-216ENST00000541416 IGKV2-24A0A0C4DH68 120 aa7.71□□□□□ -1.18
SNHG1-216ENST00000541416 PAGE4O60829 102 aa7.71□□□□□ -1.18
SNHG1-216ENST00000541416 STPG4Q8N801 248 aa7.71□□□□□ -1.18
SNHG1-216ENST00000541416 MLST8Q9BVC4 326 aa7.71□□□□□ -1.18
SNHG1-216ENST00000541416 GAGE12HA6NDE8 117 aa7.7□□□□□ -1.18
SNHG1-216ENST00000541416 AMTP48728 403 aa7.7□□□□□ -1.18
SNHG1-216ENST00000541416 NKX2-5P52952 324 aaPredicted RBP7.7□□□□□ -1.18
SNHG1-216ENST00000541416 RPS20P60866 119 aaKnown RBP7.7□□□□□ -1.18
SNHG1-216ENST00000541416 CACNG7P62955 275 aa7.7□□□□□ -1.18
SNHG1-216ENST00000541416 COTL1Q14019 142 aa7.7□□□□□ -1.18
SNHG1-216ENST00000541416 SUMO4Q6EEV6 95 aa7.7□□□□□ -1.18
SNHG1-216ENST00000541416 RASL11AQ6T310 242 aa7.7□□□□□ -1.18
SNHG1-216ENST00000541416 LYPD6BQ8NI32 183 aa7.7□□□□□ -1.18
SNHG1-216ENST00000541416 TPPP3Q9BW30 176 aa7.7□□□□□ -1.18
SNHG1-216ENST00000541416 SCO2A0A1W2PP80 73 aa7.69□□□□□ -1.18
SNHG1-216ENST00000541416 XKRY2A2RUG3 117 aa7.69□□□□□ -1.18
SNHG1-216ENST00000541416 TRGC1P0CF51 173 aa7.69□□□□□ -1.18
SNHG1-216ENST00000541416 Q5BKY6 102 aa7.69□□□□□ -1.18
SNHG1-216ENST00000541416 C15orf56Q8N910 161 aa7.69□□□□□ -1.18
SNHG1-216ENST00000541416 FER1L6-AS1Q8NA97 138 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms