RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 FAM19A4Q96LR4 140 aa7.71□□□□□ -1.18
CDC42SE1-207ENST00000540998 NAV2Q8IVL1 2488 aa7.71□□□□□ -1.18
CDC42SE1-207ENST00000540998 NDUFA4O00483 81 aa7.71□□□□□ -1.18
CDC42SE1-207ENST00000540998 AMELXQ99217 191 aa7.71□□□□□ -1.18
CDC42SE1-207ENST00000540998 A4D1N5 150 aa7.7□□□□□ -1.18
CDC42SE1-207ENST00000540998 ANKRD29Q8N6D5 301 aa7.7□□□□□ -1.18
CDC42SE1-207ENST00000540998 IGSF10Q6WRI0 2623 aa7.7□□□□□ -1.18
CDC42SE1-207ENST00000540998 IGHV1-69DA0A0B4J2H0 117 aa7.7□□□□□ -1.18
CDC42SE1-207ENST00000540998 A0A0J9YXV3 536 aa7.7□□□□□ -1.18
CDC42SE1-207ENST00000540998 FAM223BA6NKX1 122 aa7.7□□□□□ -1.18
CDC42SE1-207ENST00000540998 J3QQQ9 107 aa7.7□□□□□ -1.18
CDC42SE1-207ENST00000540998 IGHV1-69P01742 117 aa7.7□□□□□ -1.18
CDC42SE1-207ENST00000540998 UBE2D3P61077 147 aa7.7□□□□□ -1.18
CDC42SE1-207ENST00000540998 UBE2D2P62837 147 aa7.7□□□□□ -1.18
CDC42SE1-207ENST00000540998 FAM223AQ8IWN6 122 aa7.7□□□□□ -1.18
CDC42SE1-207ENST00000540998 KNCNA6PVL3 124 aa7.69□□□□□ -1.18
CDC42SE1-207ENST00000540998 KLRB1Q12918 225 aa7.69□□□□□ -1.18
CDC42SE1-207ENST00000540998 Q8N1Y9 231 aa7.69□□□□□ -1.18
CDC42SE1-207ENST00000540998 NRGNQ92686 78 aa7.69□□□□□ -1.18
CDC42SE1-207ENST00000540998 TMEM238LA0A1B0GVL6 79 aa7.69□□□□□ -1.18
CDC42SE1-207ENST00000540998 A6NJY4 79 aa7.69□□□□□ -1.18
CDC42SE1-207ENST00000540998 AVPP01185 164 aa7.69□□□□□ -1.18
CDC42SE1-207ENST00000540998 LENEPQ9Y5L5 61 aa7.69□□□□□ -1.18
CDC42SE1-207ENST00000540998 KLK9Q2XQG4 91 aa7.69□□□□□ -1.18
CDC42SE1-207ENST00000540998 Q6ZUT4 128 aa7.69□□□□□ -1.18
CDC42SE1-207ENST00000540998 CCDC168Q8NDH2 2452 aa7.68□□□□□ -1.18
CDC42SE1-207ENST00000540998 TRAV8-3A0A0A6YYJ7 113 aa7.68□□□□□ -1.18
CDC42SE1-207ENST00000540998 C9JAW5 83 aa7.68□□□□□ -1.18
CDC42SE1-207ENST00000540998 NBL1P41271 181 aa7.68□□□□□ -1.18
CDC42SE1-207ENST00000540998 MAPK1IP1LQ8NDC0 245 aa7.68□□□□□ -1.18
CDC42SE1-207ENST00000540998 KLLNB2CW77 178 aa7.68□□□□□ -1.18
CDC42SE1-207ENST00000540998 LGALS3P17931 250 aaKnown RBP7.68□□□□□ -1.18
CDC42SE1-207ENST00000540998 DCANP1Q8TF63 244 aa7.68□□□□□ -1.18
CDC42SE1-207ENST00000540998 GEMIN7Q9H840 131 aaKnown RBP7.68□□□□□ -1.18
CDC42SE1-207ENST00000540998 DAZ1Q9NQZ3 744 aaKnown RBP7.68□□□□□ -1.18
CDC42SE1-207ENST00000540998 A0A1B0GV72 72 aa7.67□□□□□ -1.18
CDC42SE1-207ENST00000540998 LINC01619G3V211 115 aa7.67□□□□□ -1.18
CDC42SE1-207ENST00000540998 VCYO14598 125 aa7.67□□□□□ -1.18
CDC42SE1-207ENST00000540998 HERVK_113P61574 105 aa7.67□□□□□ -1.18
CDC42SE1-207ENST00000540998 ZNF876PQ49A33 203 aa7.67□□□□□ -1.18
CDC42SE1-207ENST00000540998 MUSTN1Q8IVN3 82 aa7.67□□□□□ -1.18
CDC42SE1-207ENST00000540998 SLC25A29Q8N8R3 303 aa7.67□□□□□ -1.18
CDC42SE1-207ENST00000540998 SPXQ9BT56 116 aa7.67□□□□□ -1.18
CDC42SE1-207ENST00000540998 PIEZO1Q92508 2521 aa7.67□□□□□ -1.18
CDC42SE1-207ENST00000540998 C10orf126Q8N4M7 172 aa7.67□□□□□ -1.18
CDC42SE1-207ENST00000540998 DOPEY1Q5JWR5 2465 aa7.67□□□□□ -1.18
CDC42SE1-207ENST00000540998 Q1RN00 199 aa7.67□□□□□ -1.18
CDC42SE1-207ENST00000540998 ZNF469Q96JG9 3925 aaPredicted RBP7.67□□□□□ -1.18
CDC42SE1-207ENST00000540998 M0QY20 66 aa7.66□□□□□ -1.18
CDC42SE1-207ENST00000540998 PRO1854Q9UHT4 67 aa7.66□□□□□ -1.18
CDC42SE1-207ENST00000540998 IGHV4OR15-8A0A075B7B6 117 aa7.66□□□□□ -1.18
CDC42SE1-207ENST00000540998 IGHV4-30-2A0A087WSY4 118 aa7.66□□□□□ -1.18
CDC42SE1-207ENST00000540998 A0A087WW49 117 aa7.66□□□□□ -1.18
CDC42SE1-207ENST00000540998 IGHV3-16A0A0C4DH30 117 aa7.66□□□□□ -1.18
CDC42SE1-207ENST00000540998 TEN1Q86WV5 123 aa7.66□□□□□ -1.18
CDC42SE1-207ENST00000540998 NXPH4O95158 308 aa7.65□□□□□ -1.18
CDC42SE1-207ENST00000540998 IGHG2P01859 326 aa7.65□□□□□ -1.18
CDC42SE1-207ENST00000540998 ZNF22P17026 224 aaPredicted RBP7.65□□□□□ -1.18
CDC42SE1-207ENST00000540998 CRYBA4P53673 196 aa7.65□□□□□ -1.18
CDC42SE1-207ENST00000540998 DAND5Q8N907 189 aa7.65□□□□□ -1.18
CDC42SE1-207ENST00000540998 A8MWV9 139 aa7.65□□□□□ -1.18
CDC42SE1-207ENST00000540998 PRSS2P07478 247 aa7.65□□□□□ -1.18
CDC42SE1-207ENST00000540998 RBMY1A1P0DJD3 496 aaKnown RBP7.65□□□□□ -1.18
CDC42SE1-207ENST00000540998 RBMY1CP0DJD4 496 aa7.65□□□□□ -1.18
CDC42SE1-207ENST00000540998 SCGB1A1P11684 91 aa7.65□□□□□ -1.18
CDC42SE1-207ENST00000540998 RBMY1FQ15415 496 aaKnown RBP7.65□□□□□ -1.18
CDC42SE1-207ENST00000540998 APRG1Q8IVJ8 170 aa7.65□□□□□ -1.18
CDC42SE1-207ENST00000540998 RNF183Q96D59 192 aa7.65□□□□□ -1.18
CDC42SE1-207ENST00000540998 GNLYP22749 145 aa7.65□□□□□ -1.19
CDC42SE1-207ENST00000540998 SYNJ2BPP57105 145 aa7.65□□□□□ -1.19
CDC42SE1-207ENST00000540998 PPDPFLQ8WWR9 84 aa7.65□□□□□ -1.19
CDC42SE1-207ENST00000540998 IGHV3-38A0A0C4DH36 116 aa7.64□□□□□ -1.19
CDC42SE1-207ENST00000540998 TRBV27A0A0K0K1C4 114 aa7.64□□□□□ -1.19
CDC42SE1-207ENST00000540998 SLC25A20O43772 301 aa7.64□□□□□ -1.19
CDC42SE1-207ENST00000540998 IGHV4-59P01825 116 aa7.64□□□□□ -1.19
CDC42SE1-207ENST00000540998 DUX3Q96PT4 197 aa7.64□□□□□ -1.19
CDC42SE1-207ENST00000540998 TMEM223A0PJW6 202 aa7.63□□□□□ -1.19
CDC42SE1-207ENST00000540998 CRLF1O75462 422 aa7.63□□□□□ -1.19
CDC42SE1-207ENST00000540998 IGHV3-33P01772 117 aa7.63□□□□□ -1.19
CDC42SE1-207ENST00000540998 DEFB136Q30KP8 78 aa7.63□□□□□ -1.19
CDC42SE1-207ENST00000540998 ADAMTSL4-AS1Q5T5F5 129 aa7.63□□□□□ -1.19
CDC42SE1-207ENST00000540998 POM121L12Q8N7R1 296 aa7.63□□□□□ -1.19
CDC42SE1-207ENST00000540998 NTN5Q8WTR8 489 aaPredicted RBP7.63□□□□□ -1.19
CDC42SE1-207ENST00000540998 TIMM17AQ99595 171 aa7.63□□□□□ -1.19
CDC42SE1-207ENST00000540998 IGLV4-3A0A075B6K6 122 aa7.63□□□□□ -1.19
CDC42SE1-207ENST00000540998 TEX49A0A1B0GTD5 131 aa7.63□□□□□ -1.19
CDC42SE1-207ENST00000540998 A6NDX4 124 aa7.63□□□□□ -1.19
CDC42SE1-207ENST00000540998 LGALS9O00182 355 aa7.63□□□□□ -1.19
CDC42SE1-207ENST00000540998 RHODO00212 210 aa7.63□□□□□ -1.19
CDC42SE1-207ENST00000540998 TMEM263Q8WUH6 116 aaKnown RBP7.63□□□□□ -1.19
CDC42SE1-207ENST00000540998 SETXQ7Z333 2677 aaKnown RBP7.63□□□□□ -1.19
CDC42SE1-207ENST00000540998 NBPF19A0A087WUL8 3843 aa7.63□□□□□ -1.19
CDC42SE1-207ENST00000540998 A0A0U1RRA0 63 aa7.63□□□□□ -1.19
CDC42SE1-207ENST00000540998 MED14OSP0DP75 135 aa7.63□□□□□ -1.19
CDC42SE1-207ENST00000540998 Q6ZSN1 163 aa7.63□□□□□ -1.19
CDC42SE1-207ENST00000540998 C18orf65Q6ZTR6 163 aa7.62□□□□□ -1.19
CDC42SE1-207ENST00000540998 FAM104AQ969W3 186 aa7.62□□□□□ -1.19
CDC42SE1-207ENST00000540998 TMEM141Q96I45 108 aa7.62□□□□□ -1.19
CDC42SE1-207ENST00000540998 USMG5Q96IX5 58 aa7.62□□□□□ -1.19
CDC42SE1-207ENST00000540998 PPP1R17O96001 155 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms