RNA–Protein interactions for RNA: ENST00000540819.1

PRKDC-209, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-209ENST00000540819 TRBV7-7A0A0K0K1E9 115 aa2.73□□□□□ -1.97
PRKDC-209ENST00000540819 K7EP34 96 aa2.73□□□□□ -1.97
PRKDC-209ENST00000540819 PDE6GP18545 87 aa2.73□□□□□ -1.97
PRKDC-209ENST00000540819 ESPL1Q14674 2120 aa2.73□□□□□ -1.97
PRKDC-209ENST00000540819 MPV17LQ2QL34 196 aa2.73□□□□□ -1.97
PRKDC-209ENST00000540819 COA5Q86WW8 74 aa2.73□□□□□ -1.97
PRKDC-209ENST00000540819 REG4Q9BYZ8 158 aa2.73□□□□□ -1.97
PRKDC-209ENST00000540819 MAP3K1Q13233 1512 aa2.73□□□□□ -1.97
PRKDC-209ENST00000540819 ARHGEF12Q9NZN5 1544 aa2.73□□□□□ -1.97
PRKDC-209ENST00000540819 PXDNQ92626 1479 aa2.72□□□□□ -1.97
PRKDC-209ENST00000540819 SEC11AP67812 179 aa2.72□□□□□ -1.97
PRKDC-209ENST00000540819 C6orf52Q5T4I8 152 aa2.72□□□□□ -1.97
PRKDC-209ENST00000540819 MGST2Q99735 147 aa2.72□□□□□ -1.97
PRKDC-209ENST00000540819 MAGI2Q86UL8 1455 aa2.71□□□□□ -1.97
PRKDC-209ENST00000540819 MON2Q7Z3U7 1717 aa2.71□□□□□ -1.98
PRKDC-209ENST00000540819 ICE1Q9Y2F5 2266 aa2.71□□□□□ -1.98
PRKDC-209ENST00000540819 EXPH5Q8NEV8 1989 aa2.71□□□□□ -1.98
PRKDC-209ENST00000540819 IGLV3-32A0A0A0MS00 114 aa2.71□□□□□ -1.98
PRKDC-209ENST00000540819 SFT2D2O95562 160 aa2.71□□□□□ -1.98
PRKDC-209ENST00000540819 IGLV3-1P01715 115 aa2.71□□□□□ -1.98
PRKDC-209ENST00000540819 UBE2D1P51668 147 aa2.71□□□□□ -1.98
PRKDC-209ENST00000540819 CTTNBP2Q8WZ74 1663 aa2.71□□□□□ -1.98
PRKDC-209ENST00000540819 KDM5DQ9BY66 1539 aa2.71□□□□□ -1.98
PRKDC-209ENST00000540819 STRCP1A6NGW2 1772 aa2.71□□□□□ -1.98
PRKDC-209ENST00000540819 RGPD3A6NKT7 1758 aaPredicted RBP2.7□□□□□ -1.98
PRKDC-209ENST00000540819 DLEC1Q9Y238 1755 aa2.7□□□□□ -1.98
PRKDC-209ENST00000540819 UQCRHLA0A096LP55 91 aa2.7□□□□□ -1.98
PRKDC-209ENST00000540819 TRBV6-5A0A0K0K1A5 114 aa2.7□□□□□ -1.98
PRKDC-209ENST00000540819 HIGD1CA8MV81 97 aa2.7□□□□□ -1.98
PRKDC-209ENST00000540819 NDUFC1O43677 76 aa2.7□□□□□ -1.98
PRKDC-209ENST00000540819 UQCRHP07919 91 aa2.7□□□□□ -1.98
PRKDC-209ENST00000540819 PEA15Q15121 130 aa2.7□□□□□ -1.98
PRKDC-209ENST00000540819 MED12Q93074 2177 aa2.7□□□□□ -1.98
PRKDC-209ENST00000540819 NRXN2Q9P2S2 1712 aa2.69□□□□□ -1.98
PRKDC-209ENST00000540819 CRYM-AS1A6NIL9 109 aa2.69□□□□□ -1.98
PRKDC-209ENST00000540819 CYB5AP00167 134 aa2.69□□□□□ -1.98
PRKDC-209ENST00000540819 FAUP35544 74 aaKnown RBP2.69□□□□□ -1.98
PRKDC-209ENST00000540819 CYP2G1PQ6ZSU1 146 aa2.69□□□□□ -1.98
PRKDC-209ENST00000540819 FAM213BQ8TBF2 198 aa2.69□□□□□ -1.98
PRKDC-209ENST00000540819 AMELYQ99218 206 aa2.69□□□□□ -1.98
PRKDC-209ENST00000540819 TRGV9Q99603 122 aa2.69□□□□□ -1.98
PRKDC-209ENST00000540819 TMEM14CQ9P0S9 112 aa2.69□□□□□ -1.98
PRKDC-209ENST00000540819 PSME4Q14997 1843 aa2.69□□□□□ -1.98
PRKDC-209ENST00000540819 SPTBP11277 2137 aa2.68□□□□□ -1.98
PRKDC-209ENST00000540819 TEX49A0A1B0GTD5 131 aa2.68□□□□□ -1.98
PRKDC-209ENST00000540819 M0R2N4 97 aa2.68□□□□□ -1.98
PRKDC-209ENST00000540819 INE1O15225 51 aa2.68□□□□□ -1.98
PRKDC-209ENST00000540819 KRTAP10-1P60331 282 aa2.68□□□□□ -1.98
PRKDC-209ENST00000540819 SERP2Q8N6R1 65 aa2.68□□□□□ -1.98
PRKDC-209ENST00000540819 S100A13Q99584 98 aa2.68□□□□□ -1.98
PRKDC-209ENST00000540819 WFDC10AQ9H1F0 79 aa2.68□□□□□ -1.98
PRKDC-209ENST00000540819 SHANK2Q9UPX8 1470 aa2.68□□□□□ -1.98
PRKDC-209ENST00000540819 PLXNA1Q9UIW2 1896 aa2.68□□□□□ -1.98
PRKDC-209ENST00000540819 MED13Q9UHV7 2174 aa2.68□□□□□ -1.98
PRKDC-209ENST00000540819 TRBV7-3A0A075B6L6 115 aa2.67□□□□□ -1.98
PRKDC-209ENST00000540819 SPRR5A0A1B0GTR4 108 aa2.67□□□□□ -1.98
PRKDC-209ENST00000540819 IGKV1-17P01599 117 aa2.67□□□□□ -1.98
PRKDC-209ENST00000540819 NMBP08949 121 aa2.67□□□□□ -1.98
PRKDC-209ENST00000540819 C10orf128Q5T292 105 aa2.67□□□□□ -1.98
PRKDC-209ENST00000540819 LCE1CQ5T751 118 aa2.67□□□□□ -1.98
PRKDC-209ENST00000540819 LCE1BQ5T7P3 118 aa2.67□□□□□ -1.98
PRKDC-209ENST00000540819 Q6ZRN7 208 aaPredicted RBP2.67□□□□□ -1.98
PRKDC-209ENST00000540819 FAM167A-AS1Q96KT0 104 aa2.67□□□□□ -1.98
PRKDC-209ENST00000540819 C20orf78Q9BR46 151 aa2.67□□□□□ -1.98
PRKDC-209ENST00000540819 MED9Q9NWA0 146 aa2.67□□□□□ -1.98
PRKDC-209ENST00000540819 CACFD1Q9UGQ2 172 aa2.67□□□□□ -1.98
PRKDC-209ENST00000540819 RABAC1Q9UI14 185 aa2.67□□□□□ -1.98
PRKDC-209ENST00000540819 COL5A3P25940 1745 aaPredicted RBP2.67□□□□□ -1.98
PRKDC-209ENST00000540819 ADGRB2O60241 1585 aa2.66□□□□□ -1.98
PRKDC-209ENST00000540819 KIF20BQ96Q89 1820 aa2.66□□□□□ -1.98
PRKDC-209ENST00000540819 LINC00322Q6ZN03 302 aaPredicted RBP2.66□□□□□ -1.98
PRKDC-209ENST00000540819 S100A16Q96FQ6 103 aaKnown RBP2.66□□□□□ -1.98
PRKDC-209ENST00000540819 PI4KAP42356 2102 aa2.66□□□□□ -1.98
PRKDC-209ENST00000540819 CEP162Q5TB80 1403 aa2.66□□□□□ -1.98
PRKDC-209ENST00000540819 ERVK-7P63135 1459 aa2.65□□□□□ -1.98
PRKDC-209ENST00000540819 PLIN4Q96Q06 1357 aa2.65□□□□□ -1.98
PRKDC-209ENST00000540819 DNAL4O96015 105 aa2.65□□□□□ -1.99
PRKDC-209ENST00000540819 DEFB132Q7Z7B7 95 aa2.65□□□□□ -1.99
PRKDC-209ENST00000540819 ABCA4P78363 2273 aa2.65□□□□□ -1.99
PRKDC-209ENST00000540819 DOCK11Q5JSL3 2073 aa2.64□□□□□ -1.99
PRKDC-209ENST00000540819 CLTCQ00610 1675 aaKnown RBP2.64□□□□□ -1.99
PRKDC-209ENST00000540819 TNRC6BQ9UPQ9 1833 aaKnown RBP2.64□□□□□ -1.99
PRKDC-209ENST00000540819 MRPS14O60783 128 aaKnown RBP2.64□□□□□ -1.99
PRKDC-209ENST00000540819 UBE2D3P61077 147 aa2.64□□□□□ -1.99
PRKDC-209ENST00000540819 UBE2D2P62837 147 aa2.64□□□□□ -1.99
PRKDC-209ENST00000540819 TDRG1Q3Y452 100 aa2.64□□□□□ -1.99
PRKDC-209ENST00000540819 SPATA45Q537H7 98 aa2.64□□□□□ -1.99
PRKDC-209ENST00000540819 MANBALQ9NQG1 85 aa2.64□□□□□ -1.99
PRKDC-209ENST00000540819 MLH3Q9UHC1 1453 aa2.64□□□□□ -1.99
PRKDC-209ENST00000540819 LRRC37A3O60309 1634 aa2.64□□□□□ -1.99
PRKDC-209ENST00000540819 INTS1Q8N201 2190 aaKnown RBP2.63□□□□□ -1.99
PRKDC-209ENST00000540819 SUPT6HQ7KZ85 1726 aaKnown RBP2.63□□□□□ -1.99
PRKDC-209ENST00000540819 PRRC2BQ5JSZ5 2229 aaKnown RBP2.63□□□□□ -1.99
PRKDC-209ENST00000540819 LOC110117498A0A087WWA1 95 aa2.63□□□□□ -1.99
PRKDC-209ENST00000540819 SYS1-DBNDD2H3BUS1 97 aa2.63□□□□□ -1.99
PRKDC-209ENST00000540819 TRAPPC2P0DI81 140 aa2.63□□□□□ -1.99
PRKDC-209ENST00000540819 TRAPPC2BP0DI82 140 aa2.63□□□□□ -1.99
PRKDC-209ENST00000540819 SSBP1Q04837 148 aaKnown RBP2.63□□□□□ -1.99
PRKDC-209ENST00000540819 ZNF56Q15929 161 aa2.63□□□□□ -1.99
PRKDC-209ENST00000540819 PRO1854Q9UHT4 67 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms