RNA–Protein interactions for RNA: ENST00000540574.5

PHC1-208, Transcript of polyhomeotic homolog 1, humanhuman

TSL 1 (best)

Gene PHC1, Length 3,869 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-208ENST00000540574 MRPL53Q96EL3 112 aaKnown RBP7.43□□□□□ -1.22
PHC1-208ENST00000540574 ZFP2Q6ZN57 461 aa7.42□□□□□ -1.22
PHC1-208ENST00000540574 NRACQ8N912 160 aa7.42□□□□□ -1.22
PHC1-208ENST00000540574 NBEAL2Q6ZNJ1 2754 aa7.42□□□□□ -1.22
PHC1-208ENST00000540574 TRGV11A0A075B6L2 103 aa7.42□□□□□ -1.22
PHC1-208ENST00000540574 A0A0J9YXV3 536 aa7.42□□□□□ -1.22
PHC1-208ENST00000540574 C11orf86A6NJI1 115 aa7.42□□□□□ -1.22
PHC1-208ENST00000540574 RNASE3P12724 160 aaKnown RBP7.42□□□□□ -1.22
PHC1-208ENST00000540574 PMVKQ15126 192 aa7.42□□□□□ -1.22
PHC1-208ENST00000540574 U3KQK5 164 aa7.42□□□□□ -1.22
PHC1-208ENST00000540574 CIDEAO60543 219 aa7.42□□□□□ -1.22
PHC1-208ENST00000540574 C12orf74Q32Q52 190 aa7.42□□□□□ -1.22
PHC1-208ENST00000540574 GAGE13Q4V321 117 aa7.42□□□□□ -1.22
PHC1-208ENST00000540574 MEIG1Q5JSS6 88 aa7.42□□□□□ -1.22
PHC1-208ENST00000540574 SRSF2Q01130 221 aaKnown RBP7.41□□□□□ -1.22
PHC1-208ENST00000540574 LENEPQ9Y5L5 61 aa7.41□□□□□ -1.22
PHC1-208ENST00000540574 K7EP34 96 aa7.41□□□□□ -1.22
PHC1-208ENST00000540574 LINC01619G3V211 115 aa7.41□□□□□ -1.22
PHC1-208ENST00000540574 LGALS1P09382 135 aaKnown RBP7.41□□□□□ -1.22
PHC1-208ENST00000540574 GATA3P23771 443 aa7.41□□□□□ -1.22
PHC1-208ENST00000540574 C20orf78Q9BR46 151 aa7.41□□□□□ -1.22
PHC1-208ENST00000540574 WFDC2Q14508 124 aa7.4□□□□□ -1.22
PHC1-208ENST00000540574 GPHB5Q86YW7 130 aa7.4□□□□□ -1.22
PHC1-208ENST00000540574 A0A0J9YX75 114 aa7.4□□□□□ -1.22
PHC1-208ENST00000540574 UBE2L6O14933 153 aa7.4□□□□□ -1.22
PHC1-208ENST00000540574 ZNRF2Q8NHG8 242 aa7.4□□□□□ -1.22
PHC1-208ENST00000540574 C11orf68Q9H3H3 251 aaKnown RBP7.4□□□□□ -1.22
PHC1-208ENST00000540574 TEX48A0A1B0GUV7 120 aa7.4□□□□□ -1.23
PHC1-208ENST00000540574 TRPT1Q86TN4 253 aaKnown RBP7.4□□□□□ -1.23
PHC1-208ENST00000540574 OR5A1Q8NGJ0 315 aa7.4□□□□□ -1.23
PHC1-208ENST00000540574 PLEKHB2Q96CS7 222 aa7.4□□□□□ -1.23
PHC1-208ENST00000540574 GAGE12JA6NER3 117 aa7.39□□□□□ -1.23
PHC1-208ENST00000540574 GAGE4Q13068 117 aa7.39□□□□□ -1.23
PHC1-208ENST00000540574 GAGE5Q13069 117 aa7.39□□□□□ -1.23
PHC1-208ENST00000540574 DLX4Q92988 240 aaPredicted RBP7.39□□□□□ -1.23
PHC1-208ENST00000540574 BSNQ9UPA5 3926 aa7.39□□□□□ -1.23
PHC1-208ENST00000540574 ATRQ13535 2644 aa7.39□□□□□ -1.23
PHC1-208ENST00000540574 TMEM262E9PQX1 116 aa7.39□□□□□ -1.23
PHC1-208ENST00000540574 H3BUA1 57 aa7.39□□□□□ -1.23
PHC1-208ENST00000540574 PF4P02776 101 aa7.39□□□□□ -1.23
PHC1-208ENST00000540574 WFDC11Q8NEX6 87 aa7.39□□□□□ -1.23
PHC1-208ENST00000540574 DEFB130BP0DP73 79 aa7.39□□□□□ -1.23
PHC1-208ENST00000540574 DEFB130AP0DP74 79 aa7.39□□□□□ -1.23
PHC1-208ENST00000540574 ZNF415Q09FC8 603 aa7.38□□□□□ -1.23
PHC1-208ENST00000540574 BBC3Q96PG8 261 aaPredicted RBP7.38□□□□□ -1.23
PHC1-208ENST00000540574 HHLA3Q9XRX5 114 aa7.38□□□□□ -1.23
PHC1-208ENST00000540574 U3KQE9 123 aa7.38□□□□□ -1.23
PHC1-208ENST00000540574 GCN1Q92616 2671 aaKnown RBP7.38□□□□□ -1.23
PHC1-208ENST00000540574 I3L3M4 83 aa7.38□□□□□ -1.23
PHC1-208ENST00000540574 J3QQQ9 107 aa7.38□□□□□ -1.23
PHC1-208ENST00000540574 ELANEP08246 267 aa7.38□□□□□ -1.23
PHC1-208ENST00000540574 HTN3P15516 51 aa7.38□□□□□ -1.23
PHC1-208ENST00000540574 PAPPA-AS1Q5QFB9 102 aa7.38□□□□□ -1.23
PHC1-208ENST00000540574 SAMD13Q5VXD3 122 aa7.38□□□□□ -1.23
PHC1-208ENST00000540574 DAND5Q8N907 189 aa7.38□□□□□ -1.23
PHC1-208ENST00000540574 TRAV8-3A0A0A6YYJ7 113 aa7.38□□□□□ -1.23
PHC1-208ENST00000540574 SPINK8P0C7L1 97 aa7.38□□□□□ -1.23
PHC1-208ENST00000540574 TOMM6Q96B49 74 aa7.38□□□□□ -1.23
PHC1-208ENST00000540574 IGLL5B9A064 214 aa7.37□□□□□ -1.23
PHC1-208ENST00000540574 GAGE7O76087 117 aa7.37□□□□□ -1.23
PHC1-208ENST00000540574 GAGE12FP0CL80 117 aa7.37□□□□□ -1.23
PHC1-208ENST00000540574 GAGE12GP0CL81 117 aa7.37□□□□□ -1.23
PHC1-208ENST00000540574 GAGE12IP0CL82 117 aa7.37□□□□□ -1.23
PHC1-208ENST00000540574 DEFB113Q30KQ7 82 aa7.37□□□□□ -1.23
PHC1-208ENST00000540574 A0A096LPF7 62 aa7.37□□□□□ -1.23
PHC1-208ENST00000540574 PSMB8P28062 276 aa7.37□□□□□ -1.23
PHC1-208ENST00000540574 C19orf54Q5BKX5 351 aa7.37□□□□□ -1.23
PHC1-208ENST00000540574 LYRM7Q5U5X0 104 aa7.37□□□□□ -1.23
PHC1-208ENST00000540574 DCANP1Q8TF63 244 aa7.37□□□□□ -1.23
PHC1-208ENST00000540574 ATP6V0BQ99437 205 aa7.37□□□□□ -1.23
PHC1-208ENST00000540574 TIMM21Q9BVV7 248 aa7.37□□□□□ -1.23
PHC1-208ENST00000540574 TRGV4A0A0C4DH28 118 aa7.37□□□□□ -1.23
PHC1-208ENST00000540574 SIVA1O15304 175 aa7.37□□□□□ -1.23
PHC1-208ENST00000540574 INSP01308 110 aa7.36□□□□□ -1.23
PHC1-208ENST00000540574 A0A1B0GV72 72 aa7.36□□□□□ -1.23
PHC1-208ENST00000540574 A8MZ25 164 aa7.36□□□□□ -1.23
PHC1-208ENST00000540574 FOXI2Q6ZQN5 318 aa7.36□□□□□ -1.23
PHC1-208ENST00000540574 PTH2Q96A98 100 aa7.36□□□□□ -1.23
PHC1-208ENST00000540574 CNFNQ9BYD5 112 aa7.36□□□□□ -1.23
PHC1-208ENST00000540574 TSSC4Q9Y5U2 329 aaPredicted RBP7.36□□□□□ -1.23
PHC1-208ENST00000540574 K7EQG2 157 aa7.36□□□□□ -1.23
PHC1-208ENST00000540574 ITPR2Q14571 2701 aa7.36□□□□□ -1.23
PHC1-208ENST00000540574 AZU1P20160 251 aa7.35□□□□□ -1.23
PHC1-208ENST00000540574 SPAG8Q99932 426 aaPredicted RBP7.35□□□□□ -1.23
PHC1-208ENST00000540574 K7EMT4 169 aa7.35□□□□□ -1.23
PHC1-208ENST00000540574 IGLV1-40P01703 118 aa7.35□□□□□ -1.23
PHC1-208ENST00000540574 IGHV4-31P0DP07 118 aa7.35□□□□□ -1.23
PHC1-208ENST00000540574 NOP10Q9NPE3 64 aaKnown RBP7.35□□□□□ -1.23
PHC1-208ENST00000540574 ERG28Q9UKR5 140 aa7.35□□□□□ -1.23
PHC1-208ENST00000540574 CHCHD5Q9BSY4 110 aa7.35□□□□□ -1.23
PHC1-208ENST00000540574 WFDC10AQ9H1F0 79 aa7.35□□□□□ -1.23
PHC1-208ENST00000540574 TEP1Q99973 2627 aaKnown RBP7.35□□□□□ -1.23
PHC1-208ENST00000540574 C9JAW5 83 aa7.34□□□□□ -1.23
PHC1-208ENST00000540574 NEXN-AS1Q8NBZ9 246 aa7.34□□□□□ -1.23
PHC1-208ENST00000540574 MXRA5Q9NR99 2828 aa7.34□□□□□ -1.23
PHC1-208ENST00000540574 CSMD2Q7Z408 3487 aa7.34□□□□□ -1.23
PHC1-208ENST00000540574 RBX1P62877 108 aa7.34□□□□□ -1.23
PHC1-208ENST00000540574 J3QLI3 93 aa7.33□□□□□ -1.24
PHC1-208ENST00000540574 CCL24O00175 119 aa7.33□□□□□ -1.24
PHC1-208ENST00000540574 CITED2Q99967 270 aaPredicted RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms