RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 Q6ZN92 141 aa12.42□□□□□ -0.42
LTBR-207ENST00000539925 CSNK1G2-AS1Q8NCQ2 148 aa12.42□□□□□ -0.42
LTBR-207ENST00000539925 C18orf15Q96N68 181 aa12.42□□□□□ -0.42
LTBR-207ENST00000539925 SCGB3A1Q96QR1 104 aa12.42□□□□□ -0.42
LTBR-207ENST00000539925 TRAV12-1A0A0B4J245 112 aa12.42□□□□□ -0.42
LTBR-207ENST00000539925 IGHV3-53P01767 116 aa12.42□□□□□ -0.42
LTBR-207ENST00000539925 RIPPLY3P57055 190 aa12.42□□□□□ -0.42
LTBR-207ENST00000539925 C2orf66Q6UXQ4 117 aa12.42□□□□□ -0.42
LTBR-207ENST00000539925 ERASQ7Z444 233 aa12.42□□□□□ -0.42
LTBR-207ENST00000539925 WFDC10AQ9H1F0 79 aa12.42□□□□□ -0.42
LTBR-207ENST00000539925 CUBNO60494 3623 aa12.41□□□□□ -0.42
LTBR-207ENST00000539925 I3L3M4 83 aa12.41□□□□□ -0.42
LTBR-207ENST00000539925 IGLL1P15814 213 aa12.41□□□□□ -0.42
LTBR-207ENST00000539925 AZU1P20160 251 aa12.41□□□□□ -0.42
LTBR-207ENST00000539925 KIR2DL5BQ8NHK3 375 aa12.41□□□□□ -0.42
LTBR-207ENST00000539925 TNFRSF18Q9Y5U5 241 aa12.41□□□□□ -0.42
LTBR-207ENST00000539925 LBHQ53QV2 105 aaPredicted RBP12.4□□□□□ -0.42
LTBR-207ENST00000539925 MRPL16Q9NX20 251 aaKnown RBP12.4□□□□□ -0.42
LTBR-207ENST00000539925 SMIM9A6NGZ8 99 aa12.39□□□□□ -0.43
LTBR-207ENST00000539925 OR4C5Q8NGB2 326 aa12.39□□□□□ -0.43
LTBR-207ENST00000539925 TMEM141Q96I45 108 aa12.39□□□□□ -0.43
LTBR-207ENST00000539925 OVOL2Q9BRP0 275 aa12.39□□□□□ -0.43
LTBR-207ENST00000539925 TRGV1A0A0A0MS02 117 aa12.38□□□□□ -0.43
LTBR-207ENST00000539925 TRAV4A0A0B4J268 109 aa12.38□□□□□ -0.43
LTBR-207ENST00000539925 ODF1Q14990 250 aa12.38□□□□□ -0.43
LTBR-207ENST00000539925 C14orf144Q96I85 54 aa12.38□□□□□ -0.43
LTBR-207ENST00000539925 PMCHL2Q9BQD1 86 aa12.38□□□□□ -0.43
LTBR-207ENST00000539925 ZMAT4Q9H898 229 aa12.38□□□□□ -0.43
LTBR-207ENST00000539925 A0A087WX48 190 aa12.38□□□□□ -0.43
LTBR-207ENST00000539925 DPM2O94777 84 aa12.38□□□□□ -0.43
LTBR-207ENST00000539925 PRM2P04554 102 aa12.38□□□□□ -0.43
LTBR-207ENST00000539925 SHISA2Q6UWI4 295 aa12.38□□□□□ -0.43
LTBR-207ENST00000539925 TIMM17AQ99595 171 aa12.38□□□□□ -0.43
LTBR-207ENST00000539925 ZMAT5Q9UDW3 170 aaKnown RBP12.38□□□□□ -0.43
LTBR-207ENST00000539925 TRBV10-1A0A0K0K1A3 114 aa12.37□□□□□ -0.43
LTBR-207ENST00000539925 PLNP26678 52 aa12.37□□□□□ -0.43
LTBR-207ENST00000539925 APOC4P55056 127 aa12.37□□□□□ -0.43
LTBR-207ENST00000539925 IGKCP01834 107 aa12.36□□□□□ -0.43
LTBR-207ENST00000539925 MAJINQ3KP22 176 aa12.36□□□□□ -0.43
LTBR-207ENST00000539925 hDV102S1A0JD36 115 aa12.35□□□□□ -0.43
LTBR-207ENST00000539925 KRTAP24-1Q3LI83 254 aa12.35□□□□□ -0.43
LTBR-207ENST00000539925 NPSP0C0P6 89 aa12.35□□□□□ -0.43
LTBR-207ENST00000539925 HNRNPA3P51991 378 aaKnown RBP12.35□□□□□ -0.43
LTBR-207ENST00000539925 SLC25A34Q6PIV7 304 aa12.35□□□□□ -0.43
LTBR-207ENST00000539925 TP53TG1Q9Y2A0 90 aa12.35□□□□□ -0.43
LTBR-207ENST00000539925 MRPS16Q9Y3D3 137 aaKnown RBP12.35□□□□□ -0.43
LTBR-207ENST00000539925 IGHV3-73A0A0B4J1V6 119 aa12.34□□□□□ -0.43
LTBR-207ENST00000539925 TSHBP01222 138 aa12.34□□□□□ -0.43
LTBR-207ENST00000539925 PAPPA-AS1Q5QFB9 102 aa12.34□□□□□ -0.43
LTBR-207ENST00000539925 NEGR1Q7Z3B1 354 aa12.34□□□□□ -0.43
LTBR-207ENST00000539925 C3orf56Q8N813 242 aa12.34□□□□□ -0.43
LTBR-207ENST00000539925 NOP10Q9NPE3 64 aaKnown RBP12.34□□□□□ -0.43
LTBR-207ENST00000539925 DKK2Q9UBU2 259 aa12.34□□□□□ -0.43
LTBR-207ENST00000539925 JMJD1CQ15652 2540 aa12.34□□□□□ -0.43
LTBR-207ENST00000539925 F8VRH5 84 aa12.33□□□□□ -0.44
LTBR-207ENST00000539925 M0R143 59 aa12.33□□□□□ -0.44
LTBR-207ENST00000539925 Q6ZTI0 123 aa12.33□□□□□ -0.44
LTBR-207ENST00000539925 NEXN-AS1Q8NBZ9 246 aa12.33□□□□□ -0.44
LTBR-207ENST00000539925 PLAC8L1A1L4L8 177 aa12.32□□□□□ -0.44
LTBR-207ENST00000539925 IGIPA6NJ69 53 aa12.32□□□□□ -0.44
LTBR-207ENST00000539925 C20orf203Q8NBC4 194 aa12.32□□□□□ -0.44
LTBR-207ENST00000539925 COX8AP10176 69 aa12.32□□□□□ -0.44
LTBR-207ENST00000539925 BAALCQ8WXS3 180 aa12.32□□□□□ -0.44
LTBR-207ENST00000539925 CHTOPQ9Y3Y2 248 aaKnown RBP12.32□□□□□ -0.44
LTBR-207ENST00000539925 TRGV2A0A075B6R0 118 aa12.31□□□□□ -0.44
LTBR-207ENST00000539925 CRYBA4P53673 196 aa12.31□□□□□ -0.44
LTBR-207ENST00000539925 RPL36AP83881 106 aaKnown RBP12.31□□□□□ -0.44
LTBR-207ENST00000539925 C12orf54Q6X4T0 127 aa12.31□□□□□ -0.44
LTBR-207ENST00000539925 RPL36ALQ969Q0 106 aaKnown RBP12.31□□□□□ -0.44
LTBR-207ENST00000539925 MRPL35Q9NZE8 188 aaKnown RBP12.31□□□□□ -0.44
LTBR-207ENST00000539925 PYGO1Q9Y3Y4 419 aa12.31□□□□□ -0.44
LTBR-207ENST00000539925 K7EQD1 137 aa12.3□□□□□ -0.44
LTBR-207ENST00000539925 COTL1Q14019 142 aa12.3□□□□□ -0.44
LTBR-207ENST00000539925 PMVKQ15126 192 aa12.3□□□□□ -0.44
LTBR-207ENST00000539925 SPATA3Q8NHX4 192 aa12.3□□□□□ -0.44
LTBR-207ENST00000539925 TRBV7-3A0A075B6L6 115 aa12.29□□□□□ -0.44
LTBR-207ENST00000539925 DLEU1O43261 78 aa12.29□□□□□ -0.44
LTBR-207ENST00000539925 Q6ZSN1 163 aa12.29□□□□□ -0.44
LTBR-207ENST00000539925 TRBV6-4A0A1B0GX49 114 aa12.29□□□□□ -0.44
LTBR-207ENST00000539925 DAZ4Q86SG3 579 aaKnown RBP12.29□□□□□ -0.44
LTBR-207ENST00000539925 ZNF479Q96JC4 524 aa12.29□□□□□ -0.44
LTBR-207ENST00000539925 DAZ3Q9NR90 486 aaKnown RBP12.29□□□□□ -0.44
LTBR-207ENST00000539925 HHLA3Q9XRX5 114 aa12.29□□□□□ -0.44
LTBR-207ENST00000539925 NOTCH3Q9UM47 2321 aa12.28□□□□□ -0.44
LTBR-207ENST00000539925 ATRQ13535 2644 aa12.28□□□□□ -0.44
LTBR-207ENST00000539925 TEP1Q99973 2627 aaKnown RBP12.28□□□□□ -0.44
LTBR-207ENST00000539925 PRSS29PA6NIE9 313 aa12.28□□□□□ -0.44
LTBR-207ENST00000539925 P0DMU3 169 aa12.28□□□□□ -0.44
LTBR-207ENST00000539925 FAM231AP0DMU4 169 aa12.28□□□□□ -0.44
LTBR-207ENST00000539925 FAM231CP0DMU5 169 aa12.28□□□□□ -0.44
LTBR-207ENST00000539925 SMAGPQ0VAQ4 97 aa12.28□□□□□ -0.44
LTBR-207ENST00000539925 NACAE9PAV3 2078 aa12.27□□□□□ -0.44
LTBR-207ENST00000539925 GAGE12BA1L429 117 aa12.27□□□□□ -0.45
LTBR-207ENST00000539925 GAGE7O76087 117 aa12.27□□□□□ -0.45
LTBR-207ENST00000539925 GAGE12FP0CL80 117 aa12.27□□□□□ -0.45
LTBR-207ENST00000539925 GAGE12GP0CL81 117 aa12.27□□□□□ -0.45
LTBR-207ENST00000539925 GAGE12IP0CL82 117 aa12.27□□□□□ -0.45
LTBR-207ENST00000539925 CTAG1AP78358 180 aa12.27□□□□□ -0.45
LTBR-207ENST00000539925 LINC00612Q8N6U2 182 aa12.27□□□□□ -0.45
LTBR-207ENST00000539925 SPANXA1Q9NS26 97 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms