RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 DNAJC9-AS1A6NH13 148 aa5.78□□□□□ -1.48
CCDC60-204ENST00000539847 A8MWV9 139 aa5.78□□□□□ -1.48
CCDC60-204ENST00000539847 ODF3BA8MYP8 253 aa5.78□□□□□ -1.48
CCDC60-204ENST00000539847 ZNF688P0C7X2 276 aa5.78□□□□□ -1.48
CCDC60-204ENST00000539847 HERVK_113P61574 105 aa5.78□□□□□ -1.48
CCDC60-204ENST00000539847 SUMO2P61956 95 aaKnown RBP5.78□□□□□ -1.48
CCDC60-204ENST00000539847 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.78□□□□□ -1.48
CCDC60-204ENST00000539847 Q6ZUT4 128 aa5.78□□□□□ -1.48
CCDC60-204ENST00000539847 DYNAPQ8N1N2 210 aa5.78□□□□□ -1.48
CCDC60-204ENST00000539847 SYT8Q8NBV8 401 aa5.78□□□□□ -1.48
CCDC60-204ENST00000539847 TMEM141Q96I45 108 aa5.78□□□□□ -1.48
CCDC60-204ENST00000539847 LINC00477Q96M19 166 aa5.78□□□□□ -1.48
CCDC60-204ENST00000539847 TTTY13Q9BZ97 58 aa5.78□□□□□ -1.48
CCDC60-204ENST00000539847 AGPAT4-IT1Q9H0P7 198 aa5.78□□□□□ -1.48
CCDC60-204ENST00000539847 TRGV11A0A075B6L2 103 aa5.77□□□□□ -1.49
CCDC60-204ENST00000539847 GAS8-AS1O95177 125 aa5.77□□□□□ -1.49
CCDC60-204ENST00000539847 APELAP0DMC3 54 aa5.77□□□□□ -1.49
CCDC60-204ENST00000539847 GAGE5Q13069 117 aa5.77□□□□□ -1.49
CCDC60-204ENST00000539847 GAGE6Q13070 117 aa5.77□□□□□ -1.49
CCDC60-204ENST00000539847 MRPL23Q16540 153 aaKnown RBP5.77□□□□□ -1.49
CCDC60-204ENST00000539847 SLC25A29Q8N8R3 303 aa5.77□□□□□ -1.49
CCDC60-204ENST00000539847 FAM110DQ8TAY7 271 aaPredicted RBP5.77□□□□□ -1.49
CCDC60-204ENST00000539847 P0DMU3 169 aa5.76□□□□□ -1.49
CCDC60-204ENST00000539847 FAM231AP0DMU4 169 aa5.76□□□□□ -1.49
CCDC60-204ENST00000539847 FAM231CP0DMU5 169 aa5.76□□□□□ -1.49
CCDC60-204ENST00000539847 GATA1P15976 413 aaPredicted RBP5.76□□□□□ -1.49
CCDC60-204ENST00000539847 HLA-DMBP28068 263 aa5.76□□□□□ -1.49
CCDC60-204ENST00000539847 ATP5G2Q06055 141 aa5.76□□□□□ -1.49
CCDC60-204ENST00000539847 SRSF9Q13242 221 aaKnown RBP eCLIP5.76□□□□□ -1.49
CCDC60-204ENST00000539847 SPANXN1Q5VSR9 72 aa5.76□□□□□ -1.49
CCDC60-204ENST00000539847 ZFAND6Q6FIF0 208 aa5.76□□□□□ -1.49
CCDC60-204ENST00000539847 AMTNQ6UX39 209 aa5.76□□□□□ -1.49
CCDC60-204ENST00000539847 NDUFA11Q86Y39 141 aa5.76□□□□□ -1.49
CCDC60-204ENST00000539847 APRG1Q8IVJ8 170 aa5.76□□□□□ -1.49
CCDC60-204ENST00000539847 C10orf126Q8N4M7 172 aa5.76□□□□□ -1.49
CCDC60-204ENST00000539847 TMEM86BQ8N661 226 aa5.76□□□□□ -1.49
CCDC60-204ENST00000539847 Q8TAT8 98 aa5.76□□□□□ -1.49
CCDC60-204ENST00000539847 CARD19Q96LW7 228 aa5.76□□□□□ -1.49
CCDC60-204ENST00000539847 PRADC1Q9BSG0 188 aa5.76□□□□□ -1.49
CCDC60-204ENST00000539847 DPH3P1Q9H4G8 78 aa5.76□□□□□ -1.49
CCDC60-204ENST00000539847 C11orf21Q9P2W6 132 aa5.76□□□□□ -1.49
CCDC60-204ENST00000539847 ONECUT1Q9UBC0 465 aa5.76□□□□□ -1.49
CCDC60-204ENST00000539847 TRBV7-1A0A0A6YYK4 115 aa5.75□□□□□ -1.49
CCDC60-204ENST00000539847 TRAV21A0A0B4J279 112 aa5.75□□□□□ -1.49
CCDC60-204ENST00000539847 A0A0J9YY99 117 aa5.75□□□□□ -1.49
CCDC60-204ENST00000539847 C11orf86A6NJI1 115 aa5.75□□□□□ -1.49
CCDC60-204ENST00000539847 ZNF815PA8K554 130 aa5.75□□□□□ -1.49
CCDC60-204ENST00000539847 OVOL1O14753 267 aa5.75□□□□□ -1.49
CCDC60-204ENST00000539847 NXPH4O95158 308 aa5.75□□□□□ -1.49
CCDC60-204ENST00000539847 NDUFA7O95182 113 aa5.75□□□□□ -1.49
CCDC60-204ENST00000539847 SCGB1C2P0DMR2 95 aa5.75□□□□□ -1.49
CCDC60-204ENST00000539847 ZFP36P26651 326 aaKnown RBP5.75□□□□□ -1.49
CCDC60-204ENST00000539847 INSL3P51460 131 aa5.75□□□□□ -1.49
CCDC60-204ENST00000539847 NFE4Q86UQ8 179 aa5.75□□□□□ -1.49
CCDC60-204ENST00000539847 BAALCQ8WXS3 180 aa5.75□□□□□ -1.49
CCDC60-204ENST00000539847 RASL10AQ92737 203 aa5.75□□□□□ -1.49
CCDC60-204ENST00000539847 TIMM17AQ99595 171 aa5.75□□□□□ -1.49
CCDC60-204ENST00000539847 CITED1Q99966 193 aa5.75□□□□□ -1.49
CCDC60-204ENST00000539847 TRAV8-2A0A0B4J237 113 aa5.74□□□□□ -1.49
CCDC60-204ENST00000539847 A0A0J9YX75 114 aa5.74□□□□□ -1.49
CCDC60-204ENST00000539847 PRAC2D3DTV9 90 aa5.74□□□□□ -1.49
CCDC60-204ENST00000539847 RHODO00212 210 aa5.74□□□□□ -1.49
CCDC60-204ENST00000539847 BRI3O95415 125 aa5.74□□□□□ -1.49
CCDC60-204ENST00000539847 MT-ATP8P03928 68 aa5.74□□□□□ -1.49
CCDC60-204ENST00000539847 TRGV3P03979 118 aa5.74□□□□□ -1.49
CCDC60-204ENST00000539847 COX7A1P24310 79 aa5.74□□□□□ -1.49
CCDC60-204ENST00000539847 PSMB2P49721 201 aa5.74□□□□□ -1.49
CCDC60-204ENST00000539847 PMVKQ15126 192 aa5.74□□□□□ -1.49
CCDC60-204ENST00000539847 C2orf66Q6UXQ4 117 aa5.74□□□□□ -1.49
CCDC60-204ENST00000539847 RNF183Q96D59 192 aa5.74□□□□□ -1.49
CCDC60-204ENST00000539847 METTL26Q96S19 204 aa5.74□□□□□ -1.49
CCDC60-204ENST00000539847 PRO1854Q9UHT4 67 aa5.74□□□□□ -1.49
CCDC60-204ENST00000539847 SELENOKQ9Y6D0 94 aa5.74□□□□□ -1.49
CCDC60-204ENST00000539847 ARHGAP32A7KAX9 2087 aa5.73□□□□□ -1.49
CCDC60-204ENST00000539847 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.73□□□□□ -1.49
CCDC60-204ENST00000539847 A0A0B4J2C4 111 aa5.73□□□□□ -1.49
CCDC60-204ENST00000539847 TRBV6-5A0A0K0K1A5 114 aa5.73□□□□□ -1.49
CCDC60-204ENST00000539847 CLPSL1A2RUU4 121 aa5.73□□□□□ -1.49
CCDC60-204ENST00000539847 IGIPA6NJ69 53 aa5.73□□□□□ -1.49
CCDC60-204ENST00000539847 VCYO14598 125 aa5.73□□□□□ -1.49
CCDC60-204ENST00000539847 IGHV3-30P01768 117 aa5.73□□□□□ -1.49
CCDC60-204ENST00000539847 IGHV3-30-5P0DP03 117 aa5.73□□□□□ -1.49
CCDC60-204ENST00000539847 RPL13AP40429 203 aaKnown RBP5.73□□□□□ -1.49
CCDC60-204ENST00000539847 XGP55808 180 aa5.73□□□□□ -1.49
CCDC60-204ENST00000539847 SCGB1D4Q6XE38 83 aa5.73□□□□□ -1.49
CCDC60-204ENST00000539847 GPHB5Q86YW7 130 aa5.73□□□□□ -1.49
CCDC60-204ENST00000539847 IGHV7-81A0A0B4J1V7 117 aa5.72□□□□□ -1.49
CCDC60-204ENST00000539847 LOC107984156A0A0G2JMH3 177 aa5.72□□□□□ -1.49
CCDC60-204ENST00000539847 TCL1BO95988 128 aa5.72□□□□□ -1.49
CCDC60-204ENST00000539847 CRYGDP07320 174 aa5.72□□□□□ -1.49
CCDC60-204ENST00000539847 CFC1BP0CG36 223 aa5.72□□□□□ -1.49
CCDC60-204ENST00000539847 CFC1P0CG37 223 aa5.72□□□□□ -1.49
CCDC60-204ENST00000539847 POLR2KP53803 58 aaKnown RBP5.72□□□□□ -1.49
CCDC60-204ENST00000539847 ZFP2Q6ZN57 461 aa5.72□□□□□ -1.49
CCDC60-204ENST00000539847 ARL17AQ8IVW1 177 aa5.72□□□□□ -1.49
CCDC60-204ENST00000539847 EEF1AKMT3Q96AZ1 226 aa5.72□□□□□ -1.49
CCDC60-204ENST00000539847 FAM19A4Q96LR4 140 aa5.72□□□□□ -1.49
CCDC60-204ENST00000539847 DUX5Q96PT3 197 aa5.72□□□□□ -1.49
CCDC60-204ENST00000539847 CITED2Q99967 270 aaPredicted RBP5.72□□□□□ -1.49
CCDC60-204ENST00000539847 UFC1Q9Y3C8 167 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms