RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 MED13LQ71F56 2210 aa9.8□□□□□ -0.84
UBE3B-209ENST00000539584 ATXN8Q156A1 80 aa9.79□□□□□ -0.84
UBE3B-209ENST00000539584 PTH2Q96A98 100 aa9.79□□□□□ -0.84
UBE3B-209ENST00000539584 TRBV30A0A0K0K1B3 111 aa9.78□□□□□ -0.84
UBE3B-209ENST00000539584 DSCR9P59020 149 aa9.78□□□□□ -0.84
UBE3B-209ENST00000539584 SFTA2Q6UW10 78 aa9.78□□□□□ -0.84
UBE3B-209ENST00000539584 MUSTN1Q8IVN3 82 aa9.78□□□□□ -0.84
UBE3B-209ENST00000539584 ANKRD29Q8N6D5 301 aa9.78□□□□□ -0.84
UBE3B-209ENST00000539584 TRAV12-2A0A075B6T6 113 aa9.77□□□□□ -0.85
UBE3B-209ENST00000539584 TRAV2A0A0B4J234 112 aa9.77□□□□□ -0.85
UBE3B-209ENST00000539584 ATP5J2P56134 94 aa9.77□□□□□ -0.85
UBE3B-209ENST00000539584 A0A0J9YXY3 114 aa9.77□□□□□ -0.85
UBE3B-209ENST00000539584 ELANEP08246 267 aa9.77□□□□□ -0.85
UBE3B-209ENST00000539584 SPINK13Q1W4C9 94 aa9.77□□□□□ -0.85
UBE3B-209ENST00000539584 WFDC12Q8WWY7 111 aa9.77□□□□□ -0.85
UBE3B-209ENST00000539584 TIMM21Q9BVV7 248 aa9.77□□□□□ -0.85
UBE3B-209ENST00000539584 SPANXDQ9BXN6 97 aa9.77□□□□□ -0.85
UBE3B-209ENST00000539584 SPANXCQ9NY87 97 aa9.77□□□□□ -0.85
UBE3B-209ENST00000539584 A0A0J9YXV3 536 aa9.76□□□□□ -0.85
UBE3B-209ENST00000539584 EDN2P20800 178 aa9.76□□□□□ -0.85
UBE3B-209ENST00000539584 GEMIN7Q9H840 131 aaKnown RBP9.76□□□□□ -0.85
UBE3B-209ENST00000539584 SPANXA1Q9NS26 97 aa9.76□□□□□ -0.85
UBE3B-209ENST00000539584 SPTBN2O15020 2390 aa9.76□□□□□ -0.85
UBE3B-209ENST00000539584 IGHV4-30-2A0A087WSY4 118 aa9.75□□□□□ -0.85
UBE3B-209ENST00000539584 IGHV1-58A0A0C4DH39 117 aa9.75□□□□□ -0.85
UBE3B-209ENST00000539584 A8MTW9 85 aa9.75□□□□□ -0.85
UBE3B-209ENST00000539584 IGHV3-30-3P0DP02 117 aa9.75□□□□□ -0.85
UBE3B-209ENST00000539584 XGP55808 180 aa9.75□□□□□ -0.85
UBE3B-209ENST00000539584 Q5PR19 223 aa9.75□□□□□ -0.85
UBE3B-209ENST00000539584 RAX2Q96IS3 184 aa9.75□□□□□ -0.85
UBE3B-209ENST00000539584 OPRPNQ99935 248 aaPredicted RBP9.75□□□□□ -0.85
UBE3B-209ENST00000539584 CEP295Q9C0D2 2601 aa9.75□□□□□ -0.85
UBE3B-209ENST00000539584 TINCRA0A1B0GVN0 87 aa9.75□□□□□ -0.85
UBE3B-209ENST00000539584 C9JAW5 83 aa9.75□□□□□ -0.85
UBE3B-209ENST00000539584 MT-ATP8P03928 68 aa9.75□□□□□ -0.85
UBE3B-209ENST00000539584 CD28P10747 220 aa9.75□□□□□ -0.85
UBE3B-209ENST00000539584 FHL3Q13643 280 aa9.75□□□□□ -0.85
UBE3B-209ENST00000539584 LY6DQ14210 128 aa9.75□□□□□ -0.85
UBE3B-209ENST00000539584 PRORYQ9H606 182 aa9.75□□□□□ -0.85
UBE3B-209ENST00000539584 TNFRSF18Q9Y5U5 241 aa9.75□□□□□ -0.85
UBE3B-209ENST00000539584 J3QLI3 93 aa9.74□□□□□ -0.85
UBE3B-209ENST00000539584 IGKV3-20P01619 116 aa9.74□□□□□ -0.85
UBE3B-209ENST00000539584 GNLYP22749 145 aa9.74□□□□□ -0.85
UBE3B-209ENST00000539584 RPL13AP40429 203 aaKnown RBP9.74□□□□□ -0.85
UBE3B-209ENST00000539584 DNAJC30Q96LL9 226 aa9.74□□□□□ -0.85
UBE3B-209ENST00000539584 UBE2E2Q96LR5 201 aa9.74□□□□□ -0.85
UBE3B-209ENST00000539584 YAE1D1Q9NRH1 226 aa9.74□□□□□ -0.85
UBE3B-209ENST00000539584 SPTBN1Q01082 2364 aaKnown RBP9.73□□□□□ -0.85
UBE3B-209ENST00000539584 TIMM17BO60830 172 aa9.73□□□□□ -0.85
UBE3B-209ENST00000539584 COX6CP09669 75 aa9.73□□□□□ -0.85
UBE3B-209ENST00000539584 LINC01620Q4KN68 170 aa9.73□□□□□ -0.85
UBE3B-209ENST00000539584 DEFB104AQ8WTQ1 72 aa9.73□□□□□ -0.85
UBE3B-209ENST00000539584 TRBV10-2A0A0K0K1G8 114 aa9.73□□□□□ -0.85
UBE3B-209ENST00000539584 IFITM1P13164 125 aa9.73□□□□□ -0.85
UBE3B-209ENST00000539584 Q1RN00 199 aa9.73□□□□□ -0.85
UBE3B-209ENST00000539584 LITAFQ99732 161 aa9.73□□□□□ -0.85
UBE3B-209ENST00000539584 SPXQ9BT56 116 aa9.73□□□□□ -0.85
UBE3B-209ENST00000539584 RELNP78509 3460 aa9.73□□□□□ -0.85
UBE3B-209ENST00000539584 EIF4EBP3O60516 100 aaPredicted RBP9.72□□□□□ -0.85
UBE3B-209ENST00000539584 SYNJ2BPP57105 145 aa9.72□□□□□ -0.85
UBE3B-209ENST00000539584 ZFAND6Q6FIF0 208 aa9.72□□□□□ -0.85
UBE3B-209ENST00000539584 LINC00467Q9BRT7 94 aa9.72□□□□□ -0.85
UBE3B-209ENST00000539584 ABCA2Q9BZC7 2435 aa9.72□□□□□ -0.85
UBE3B-209ENST00000539584 VSIG2Q96IQ7 327 aa9.72□□□□□ -0.85
UBE3B-209ENST00000539584 NDUFA12Q9UI09 145 aa9.72□□□□□ -0.85
UBE3B-209ENST00000539584 HIVEP3Q5T1R4 2406 aa9.71□□□□□ -0.86
UBE3B-209ENST00000539584 AVPP01185 164 aa9.71□□□□□ -0.86
UBE3B-209ENST00000539584 IGHV4-59P01825 116 aa9.71□□□□□ -0.86
UBE3B-209ENST00000539584 ZNF415Q09FC8 603 aa9.71□□□□□ -0.86
UBE3B-209ENST00000539584 MIAQ16674 131 aa9.71□□□□□ -0.86
UBE3B-209ENST00000539584 DEFB112Q30KQ8 113 aa9.71□□□□□ -0.86
UBE3B-209ENST00000539584 TMEM95Q3KNT9 176 aa9.71□□□□□ -0.86
UBE3B-209ENST00000539584 TEX29Q8N6K0 151 aa9.71□□□□□ -0.86
UBE3B-209ENST00000539584 LINC01356Q8N9X3 169 aa9.71□□□□□ -0.86
UBE3B-209ENST00000539584 H3BT86 120 aa9.7□□□□□ -0.86
UBE3B-209ENST00000539584 HOXD3P31249 432 aaPredicted RBP9.7□□□□□ -0.86
UBE3B-209ENST00000539584 FAM104AQ969W3 186 aa9.7□□□□□ -0.86
UBE3B-209ENST00000539584 NBASA2RRP1 2371 aa9.7□□□□□ -0.86
UBE3B-209ENST00000539584 IGHV3-64A0A075B6Q5 118 aa9.7□□□□□ -0.86
UBE3B-209ENST00000539584 UBE2D4Q9Y2X8 147 aa9.7□□□□□ -0.86
UBE3B-209ENST00000539584 TIRAPP58753 221 aa9.69□□□□□ -0.86
UBE3B-209ENST00000539584 Q6Q795 121 aa9.69□□□□□ -0.86
UBE3B-209ENST00000539584 CITED1Q99966 193 aa9.69□□□□□ -0.86
UBE3B-209ENST00000539584 TRIAP1O43715 76 aa9.68□□□□□ -0.86
UBE3B-209ENST00000539584 TGFAP01135 160 aa9.68□□□□□ -0.86
UBE3B-209ENST00000539584 PRSS2P07478 247 aa9.68□□□□□ -0.86
UBE3B-209ENST00000539584 COPS9Q8WXC6 57 aa9.68□□□□□ -0.86
UBE3B-209ENST00000539584 CHCHD7Q9BUK0 85 aa9.68□□□□□ -0.86
UBE3B-209ENST00000539584 VPREB3Q9UKI3 123 aa9.68□□□□□ -0.86
UBE3B-209ENST00000539584 ICOSQ9Y6W8 199 aa9.68□□□□□ -0.86
UBE3B-209ENST00000539584 H3BMM0 161 aa9.68□□□□□ -0.86
UBE3B-209ENST00000539584 H7C2G1 150 aa9.68□□□□□ -0.86
UBE3B-209ENST00000539584 MRPL23Q16540 153 aaKnown RBP9.68□□□□□ -0.86
UBE3B-209ENST00000539584 IGLV5-45A0A087WSX0 123 aa9.67□□□□□ -0.86
UBE3B-209ENST00000539584 SNCGO76070 127 aa9.67□□□□□ -0.86
UBE3B-209ENST00000539584 IGHV3-53P01767 116 aa9.67□□□□□ -0.86
UBE3B-209ENST00000539584 NTN5Q8WTR8 489 aaPredicted RBP9.67□□□□□ -0.86
UBE3B-209ENST00000539584 DUX5Q96PT3 197 aa9.67□□□□□ -0.86
UBE3B-209ENST00000539584 DUX3Q96PT4 197 aa9.67□□□□□ -0.86
UBE3B-209ENST00000539584 SVEP1Q4LDE5 3571 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms