RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 CRYBA4P53673 196 aa11.09□□□□□ -0.63
CACNB1-206ENST00000539338 CITED2Q99967 270 aaPredicted RBP11.09□□□□□ -0.63
CACNB1-206ENST00000539338 C11orf86A6NJI1 115 aa11.09□□□□□ -0.63
CACNB1-206ENST00000539338 GYPEP15421 78 aa11.09□□□□□ -0.63
CACNB1-206ENST00000539338 MDFICQ9P1T7 246 aa11.09□□□□□ -0.63
CACNB1-206ENST00000539338 K7EMT4 169 aa11.08□□□□□ -0.64
CACNB1-206ENST00000539338 C4orf3Q8WVX3 66 aa11.08□□□□□ -0.64
CACNB1-206ENST00000539338 DSCR8Q96T75 97 aa11.08□□□□□ -0.64
CACNB1-206ENST00000539338 ESM1Q9NQ30 184 aa11.08□□□□□ -0.64
CACNB1-206ENST00000539338 TRAV4A0A0B4J268 109 aa11.08□□□□□ -0.64
CACNB1-206ENST00000539338 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.08□□□□□ -0.64
CACNB1-206ENST00000539338 CCDC140Q96MF4 163 aa11.08□□□□□ -0.64
CACNB1-206ENST00000539338 IGHG4P01861 327 aa11.08□□□□□ -0.64
CACNB1-206ENST00000539338 GPHB5Q86YW7 130 aa11.08□□□□□ -0.64
CACNB1-206ENST00000539338 HIGD1BQ9P298 99 aa11.08□□□□□ -0.64
CACNB1-206ENST00000539338 WNK1Q9H4A3 2382 aa11.08□□□□□ -0.64
CACNB1-206ENST00000539338 HERV-K104P63124 156 aa11.07□□□□□ -0.64
CACNB1-206ENST00000539338 RNF152Q8N8N0 203 aa11.07□□□□□ -0.64
CACNB1-206ENST00000539338 C16orf74Q96GX8 76 aa11.07□□□□□ -0.64
CACNB1-206ENST00000539338 OPRPNQ99935 248 aaPredicted RBP11.07□□□□□ -0.64
CACNB1-206ENST00000539338 E9PLD3 99 aa11.06□□□□□ -0.64
CACNB1-206ENST00000539338 IGKV2D-24A0A075B6R9 120 aa11.06□□□□□ -0.64
CACNB1-206ENST00000539338 F8W735 103 aaPredicted RBP11.06□□□□□ -0.64
CACNB1-206ENST00000539338 ATP6V0E2Q8NHE4 81 aa11.06□□□□□ -0.64
CACNB1-206ENST00000539338 ICOSQ9Y6W8 199 aa11.06□□□□□ -0.64
CACNB1-206ENST00000539338 NUP210LQ5VU65 1888 aa11.06□□□□□ -0.64
CACNB1-206ENST00000539338 SND1-IT1Q9HBX3 110 aa11.05□□□□□ -0.64
CACNB1-206ENST00000539338 ODF3BA8MYP8 253 aa11.05□□□□□ -0.64
CACNB1-206ENST00000539338 ATP5G1P05496 136 aa11.05□□□□□ -0.64
CACNB1-206ENST00000539338 RPL32P62910 135 aaKnown RBP11.05□□□□□ -0.64
CACNB1-206ENST00000539338 DAZ2Q13117 558 aaKnown RBP11.05□□□□□ -0.64
CACNB1-206ENST00000539338 Q6YL49 198 aa11.05□□□□□ -0.64
CACNB1-206ENST00000539338 DAZ4Q86SG3 579 aaKnown RBP11.05□□□□□ -0.64
CACNB1-206ENST00000539338 DAZ3Q9NR90 486 aaKnown RBP11.05□□□□□ -0.64
CACNB1-206ENST00000539338 MED14OSP0DP75 135 aa11.05□□□□□ -0.64
CACNB1-206ENST00000539338 TIMM17AQ99595 171 aa11.05□□□□□ -0.64
CACNB1-206ENST00000539338 Q9HAA7 133 aa11.05□□□□□ -0.64
CACNB1-206ENST00000539338 MLST8Q9BVC4 326 aa11.05□□□□□ -0.64
CACNB1-206ENST00000539338 TP73-AS1Q9UF72 201 aa11.05□□□□□ -0.64
CACNB1-206ENST00000539338 RBMY1FQ15415 496 aaKnown RBP11.04□□□□□ -0.64
CACNB1-206ENST00000539338 IGHV4-4A0A075B6R2 117 aa11.04□□□□□ -0.64
CACNB1-206ENST00000539338 ORMDL1Q9P0S3 153 aa11.04□□□□□ -0.64
CACNB1-206ENST00000539338 TRBV7-3A0A075B6L6 115 aa11.04□□□□□ -0.64
CACNB1-206ENST00000539338 A6NDX4 124 aa11.04□□□□□ -0.64
CACNB1-206ENST00000539338 A0A0J9YX75 114 aa11.03□□□□□ -0.64
CACNB1-206ENST00000539338 TMEM61Q8N0U2 210 aa11.03□□□□□ -0.64
CACNB1-206ENST00000539338 LMO4P61968 165 aa11.03□□□□□ -0.64
CACNB1-206ENST00000539338 CEMP1Q6PRD7 247 aaPredicted RBP11.03□□□□□ -0.64
CACNB1-206ENST00000539338 LINC01620Q4KN68 170 aa11.02□□□□□ -0.64
CACNB1-206ENST00000539338 COX7B2Q8TF08 81 aa11.02□□□□□ -0.64
CACNB1-206ENST00000539338 C11orf45Q8TAV5 145 aa11.02□□□□□ -0.65
CACNB1-206ENST00000539338 DSCAML1Q8TD84 2053 aa11.02□□□□□ -0.65
CACNB1-206ENST00000539338 DEFB105AQ8NG35 78 aa11.02□□□□□ -0.65
CACNB1-206ENST00000539338 TP53TG3Q9ULZ0 132 aa11.02□□□□□ -0.65
CACNB1-206ENST00000539338 PLXNB1O43157 2135 aa11.01□□□□□ -0.65
CACNB1-206ENST00000539338 YPEL4Q96NS1 127 aa11.01□□□□□ -0.65
CACNB1-206ENST00000539338 TEN1Q86WV5 123 aa11.01□□□□□ -0.65
CACNB1-206ENST00000539338 SPATA12Q7Z6I5 190 aa11.01□□□□□ -0.65
CACNB1-206ENST00000539338 C20orf203Q8NBC4 194 aa11.01□□□□□ -0.65
CACNB1-206ENST00000539338 IGHV3-30P01768 117 aa11□□□□□ -0.65
CACNB1-206ENST00000539338 IGHV3-33P01772 117 aa11□□□□□ -0.65
CACNB1-206ENST00000539338 IGHV3-30-3P0DP02 117 aa11□□□□□ -0.65
CACNB1-206ENST00000539338 IGHV3-30-5P0DP03 117 aa11□□□□□ -0.65
CACNB1-206ENST00000539338 VSIG2Q96IQ7 327 aa11□□□□□ -0.65
CACNB1-206ENST00000539338 DEFB4AO15263 64 aa11□□□□□ -0.65
CACNB1-206ENST00000539338 IGF1P05019 195 aa11□□□□□ -0.65
CACNB1-206ENST00000539338 IGLC6P0CF74 106 aa11□□□□□ -0.65
CACNB1-206ENST00000539338 BBC3Q96PG8 261 aaPredicted RBP11□□□□□ -0.65
CACNB1-206ENST00000539338 COX7A2LO14548 114 aa11□□□□□ -0.65
CACNB1-206ENST00000539338 MRPL23Q16540 153 aaKnown RBP10.99□□□□□ -0.65
CACNB1-206ENST00000539338 CRYGBP07316 175 aa10.99□□□□□ -0.65
CACNB1-206ENST00000539338 P0DMU3 169 aa10.99□□□□□ -0.65
CACNB1-206ENST00000539338 FAM231AP0DMU4 169 aa10.99□□□□□ -0.65
CACNB1-206ENST00000539338 FAM231CP0DMU5 169 aa10.99□□□□□ -0.65
CACNB1-206ENST00000539338 CLEC2BQ92478 149 aa10.99□□□□□ -0.65
CACNB1-206ENST00000539338 B5MCH6 92 aa10.99□□□□□ -0.65
CACNB1-206ENST00000539338 KIAA1549Q9HCM3 1950 aa10.99□□□□□ -0.65
CACNB1-206ENST00000539338 TRACP01848 142 aa10.99□□□□□ -0.65
CACNB1-206ENST00000539338 C1orf43Q9BWL3 253 aa10.99□□□□□ -0.65
CACNB1-206ENST00000539338 HHLA3Q9XRX5 114 aa10.99□□□□□ -0.65
CACNB1-206ENST00000539338 TANC2Q9HCD6 1990 aa10.98□□□□□ -0.65
CACNB1-206ENST00000539338 CAMK2N2Q96S95 79 aa10.98□□□□□ -0.65
CACNB1-206ENST00000539338 PTH2Q96A98 100 aa10.98□□□□□ -0.65
CACNB1-206ENST00000539338 NDUFA7O95182 113 aa10.98□□□□□ -0.65
CACNB1-206ENST00000539338 CRIP1P50238 77 aa10.98□□□□□ -0.65
CACNB1-206ENST00000539338 SONP18583 2426 aaKnown RBP10.97□□□□□ -0.65
CACNB1-206ENST00000539338 FOXI1Q12951 378 aa10.97□□□□□ -0.65
CACNB1-206ENST00000539338 C20orf173Q96LM9 149 aa10.97□□□□□ -0.65
CACNB1-206ENST00000539338 PSMG3-AS1Q96PY0 264 aa10.97□□□□□ -0.65
CACNB1-206ENST00000539338 IGHV1-58A0A0C4DH39 117 aa10.97□□□□□ -0.65
CACNB1-206ENST00000539338 hADV29S1A0JD25 119 aa10.97□□□□□ -0.65
CACNB1-206ENST00000539338 C14orf177Q52M58 125 aa10.97□□□□□ -0.65
CACNB1-206ENST00000539338 C10orf142B7Z368 130 aa10.96□□□□□ -0.65
CACNB1-206ENST00000539338 DEFB135Q30KP9 77 aa10.96□□□□□ -0.65
CACNB1-206ENST00000539338 WDR87Q6ZQQ6 2873 aa10.96□□□□□ -0.66
CACNB1-206ENST00000539338 LY6G6CO95867 125 aa10.96□□□□□ -0.66
CACNB1-206ENST00000539338 RPL18AQ02543 176 aaKnown RBP10.96□□□□□ -0.66
CACNB1-206ENST00000539338 Q6ZUT4 128 aa10.96□□□□□ -0.66
CACNB1-206ENST00000539338 MAP6D1Q9H9H5 199 aa10.96□□□□□ -0.66
CACNB1-206ENST00000539338 H0YGX0 51 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms