RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 OR10AC1Q8NH08 325 aa0.42□□□□□ -2.34
HIF1A-204ENST00000539097 OR4K13Q8NH42 304 aa0.42□□□□□ -2.34
HIF1A-204ENST00000539097 SLC25A40Q8TBP6 338 aa0.42□□□□□ -2.34
HIF1A-204ENST00000539097 DYDC1Q8WWB3 177 aa0.42□□□□□ -2.34
HIF1A-204ENST00000539097 OR8B2Q96RD0 313 aa0.42□□□□□ -2.34
HIF1A-204ENST00000539097 NMNAT3Q96T66 252 aa0.42□□□□□ -2.34
HIF1A-204ENST00000539097 AGPAT4-IT1Q9H0P7 198 aa0.42□□□□□ -2.34
HIF1A-204ENST00000539097 SLC35B3Q9H1N7 401 aa0.42□□□□□ -2.34
HIF1A-204ENST00000539097 CHCHD2Q9Y6H1 151 aaPredicted RBP0.42□□□□□ -2.34
HIF1A-204ENST00000539097 PIEZO2Q9H5I5 2752 aa0.42□□□□□ -2.34
HIF1A-204ENST00000539097 LOC400499M0QZD8 3231 aa0.42□□□□□ -2.34
HIF1A-204ENST00000539097 ROS1P08922 2347 aa0.42□□□□□ -2.34
HIF1A-204ENST00000539097 E7EQ34 232 aa0.42□□□□□ -2.34
HIF1A-204ENST00000539097 CNBPP62633 177 aaKnown RBP0.42□□□□□ -2.34
HIF1A-204ENST00000539097 DEFB134Q4QY38 66 aa0.42□□□□□ -2.34
HIF1A-204ENST00000539097 PYDC2Q56P42 97 aa0.42□□□□□ -2.34
HIF1A-204ENST00000539097 Q6ZRN7 208 aaPredicted RBP0.42□□□□□ -2.34
HIF1A-204ENST00000539097 LINC00299Q6ZSB3 139 aa0.42□□□□□ -2.34
HIF1A-204ENST00000539097 FAM19A2Q8N3H0 131 aa0.42□□□□□ -2.34
HIF1A-204ENST00000539097 WDR61Q9GZS3 305 aaKnown RBP0.42□□□□□ -2.34
HIF1A-204ENST00000539097 NIT2Q9NQR4 276 aa0.42□□□□□ -2.34
HIF1A-204ENST00000539097 COPZ2Q9P299 210 aa0.42□□□□□ -2.34
HIF1A-204ENST00000539097 SNRNP200O75643 2136 aaKnown RBP0.42□□□□□ -2.34
HIF1A-204ENST00000539097 DNAH10Q8IVF4 4471 aa0.42□□□□□ -2.34
HIF1A-204ENST00000539097 CHD9Q3L8U1 2897 aa0.42□□□□□ -2.34
HIF1A-204ENST00000539097 FREM2Q5SZK8 3169 aa0.42□□□□□ -2.34
HIF1A-204ENST00000539097 KNTC1P50748 2209 aa0.42□□□□□ -2.34
HIF1A-204ENST00000539097 TRAV27A0A087WT01 109 aa0.42□□□□□ -2.34
HIF1A-204ENST00000539097 TRBV27A0A0K0K1C4 114 aa0.42□□□□□ -2.34
HIF1A-204ENST00000539097 OR1I1O60431 355 aa0.42□□□□□ -2.34
HIF1A-204ENST00000539097 MT-ND4LP03901 98 aa0.42□□□□□ -2.34
HIF1A-204ENST00000539097 TCRAP04437 139 aa0.42□□□□□ -2.34
HIF1A-204ENST00000539097 PRM2P04554 102 aa0.42□□□□□ -2.34
HIF1A-204ENST00000539097 COX4I1P13073 169 aa0.42□□□□□ -2.34
HIF1A-204ENST00000539097 PCOTHQ58A44 107 aa0.42□□□□□ -2.34
HIF1A-204ENST00000539097 TMEM244Q5VVB8 128 aa0.42□□□□□ -2.34
HIF1A-204ENST00000539097 C7orf65Q6ZTY9 151 aa0.42□□□□□ -2.34
HIF1A-204ENST00000539097 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.42□□□□□ -2.34
HIF1A-204ENST00000539097 OR5A2Q8NGI9 324 aa0.42□□□□□ -2.34
HIF1A-204ENST00000539097 MFSD8Q8NHS3 518 aa0.42□□□□□ -2.34
HIF1A-204ENST00000539097 RAB2BQ8WUD1 216 aa0.42□□□□□ -2.34
HIF1A-204ENST00000539097 GPER1Q99527 375 aa0.42□□□□□ -2.34
HIF1A-204ENST00000539097 ENY2Q9NPA8 101 aa0.42□□□□□ -2.34
HIF1A-204ENST00000539097 LSM2Q9Y333 95 aaKnown RBP0.42□□□□□ -2.34
HIF1A-204ENST00000539097 DSPPQ9NZW4 1301 aa0.42□□□□□ -2.34
HIF1A-204ENST00000539097 OOSP1A8MZH6 123 aa0.41□□□□□ -2.34
HIF1A-204ENST00000539097 CLDN25C9JDP6 229 aa0.41□□□□□ -2.34
HIF1A-204ENST00000539097 G3V2T6 193 aa0.41□□□□□ -2.34
HIF1A-204ENST00000539097 TAX1BP3O14907 124 aa0.41□□□□□ -2.34
HIF1A-204ENST00000539097 ZNF705DP0CH99 300 aaPredicted RBP0.41□□□□□ -2.34
HIF1A-204ENST00000539097 ZNF705BP0CI00 300 aaPredicted RBP0.41□□□□□ -2.34
HIF1A-204ENST00000539097 HLA-DRB4P13762 266 aa0.41□□□□□ -2.34
HIF1A-204ENST00000539097 RPL18Q07020 188 aaKnown RBP0.41□□□□□ -2.34
HIF1A-204ENST00000539097 Q8N8P6 123 aa0.41□□□□□ -2.34
HIF1A-204ENST00000539097 OR51A4Q8NGJ6 313 aa0.41□□□□□ -2.34
HIF1A-204ENST00000539097 LCN9Q8WX39 176 aa0.41□□□□□ -2.34
HIF1A-204ENST00000539097 PHB2Q99623 299 aa0.41□□□□□ -2.34
HIF1A-204ENST00000539097 RETNLBQ9BQ08 111 aa0.41□□□□□ -2.34
HIF1A-204ENST00000539097 TMEM191AQ9H0A3 160 aa0.41□□□□□ -2.34
HIF1A-204ENST00000539097 DPH3P1Q9H4G8 78 aa0.41□□□□□ -2.34
HIF1A-204ENST00000539097 NPVFQ9HCQ7 196 aa0.41□□□□□ -2.34
HIF1A-204ENST00000539097 TAS2R4Q9NYW5 299 aa0.41□□□□□ -2.34
HIF1A-204ENST00000539097 IL36BQ9NZH7 164 aa0.41□□□□□ -2.34
HIF1A-204ENST00000539097 SNX12Q9UMY4 172 aa0.41□□□□□ -2.34
HIF1A-204ENST00000539097 RPL26L1Q9UNX3 145 aaKnown RBP0.41□□□□□ -2.34
HIF1A-204ENST00000539097 LHFPL6Q9Y693 200 aa0.41□□□□□ -2.34
HIF1A-204ENST00000539097 HLA-DRB4X5D2U9 266 aa0.41□□□□□ -2.34
HIF1A-204ENST00000539097 FYCO1Q9BQS8 1478 aa0.41□□□□□ -2.34
HIF1A-204ENST00000539097 ANKRD36CQ5JPF3 1778 aa0.41□□□□□ -2.34
HIF1A-204ENST00000539097 SCN3AQ9NY46 2000 aa0.41□□□□□ -2.34
HIF1A-204ENST00000539097 ALPK2Q86TB3 2170 aa0.41□□□□□ -2.34
HIF1A-204ENST00000539097 ITPR3Q14573 2671 aa0.41□□□□□ -2.34
HIF1A-204ENST00000539097 TRBV20OR9-2A0A075B6H5 130 aa0.41□□□□□ -2.34
HIF1A-204ENST00000539097 TRAV9-1A0A075B6T8 112 aa0.41□□□□□ -2.34
HIF1A-204ENST00000539097 TRAV12-1A0A0B4J245 112 aa0.41□□□□□ -2.34
HIF1A-204ENST00000539097 TRAV1-1A0A0B4J248 108 aa0.41□□□□□ -2.34
HIF1A-204ENST00000539097 C11orf86A6NJI1 115 aa0.41□□□□□ -2.34
HIF1A-204ENST00000539097 ZNF705FA8MVS1 300 aaPredicted RBP0.41□□□□□ -2.34
HIF1A-204ENST00000539097 E7EUB6 86 aa0.41□□□□□ -2.34
HIF1A-204ENST00000539097 GABARAPH6UMI1 98 aa0.41□□□□□ -2.34
HIF1A-204ENST00000539097 TMEM256-PLSCR3K7ERE1 68 aa0.41□□□□□ -2.34
HIF1A-204ENST00000539097 IGHV3-7P01780 117 aa0.41□□□□□ -2.34
HIF1A-204ENST00000539097 DBIP07108 87 aaKnown RBP0.41□□□□□ -2.34
HIF1A-204ENST00000539097 CTSGP08311 255 aa0.41□□□□□ -2.34
HIF1A-204ENST00000539097 ARPP19P56211 112 aa0.41□□□□□ -2.34
HIF1A-204ENST00000539097 WHAMMP3Q1A5X7 153 aa0.41□□□□□ -2.34
HIF1A-204ENST00000539097 LGALSLQ3ZCW2 172 aaPredicted RBP0.41□□□□□ -2.34
HIF1A-204ENST00000539097 SIGLECL1Q8N7X8 197 aa0.41□□□□□ -2.34
HIF1A-204ENST00000539097 C22orf24Q9Y442 160 aa0.41□□□□□ -2.34
HIF1A-204ENST00000539097 PCNX1Q96RV3 2341 aa0.41□□□□□ -2.34
HIF1A-204ENST00000539097 MYO18AQ92614 2054 aaKnown RBP0.41□□□□□ -2.34
HIF1A-204ENST00000539097 PRXQ9BXM0 1461 aa0.41□□□□□ -2.34
HIF1A-204ENST00000539097 IGHV1-18A0A0C4DH31 117 aa0.41□□□□□ -2.34
HIF1A-204ENST00000539097 RIIAD1A6NNX1 92 aa0.41□□□□□ -2.34
HIF1A-204ENST00000539097 F6UZH7 168 aa0.41□□□□□ -2.34
HIF1A-204ENST00000539097 LEPROTO15243 131 aa0.41□□□□□ -2.34
HIF1A-204ENST00000539097 OR2T1O43869 369 aa0.41□□□□□ -2.34
HIF1A-204ENST00000539097 CMPK1P30085 196 aa0.41□□□□□ -2.34
HIF1A-204ENST00000539097 MYL5Q02045 173 aa0.41□□□□□ -2.34
HIF1A-204ENST00000539097 MSMO1Q15800 293 aa0.41□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms