RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 E9PLD3 99 aa10.84□□□□□ -0.67
CDCA3-207ENST00000538862 POLR2KP53803 58 aaKnown RBP10.84□□□□□ -0.67
CDCA3-207ENST00000538862 HIST1H4GQ99525 98 aa10.84□□□□□ -0.67
CDCA3-207ENST00000538862 TRBV7-3A0A075B6L6 115 aa10.83□□□□□ -0.68
CDCA3-207ENST00000538862 EDN2P20800 178 aa10.83□□□□□ -0.68
CDCA3-207ENST00000538862 CITED2Q99967 270 aaPredicted RBP10.83□□□□□ -0.68
CDCA3-207ENST00000538862 K7ERJ3 54 aa10.82□□□□□ -0.68
CDCA3-207ENST00000538862 VCYO14598 125 aa10.82□□□□□ -0.68
CDCA3-207ENST00000538862 CD7P09564 240 aa10.82□□□□□ -0.68
CDCA3-207ENST00000538862 C12orf74Q32Q52 190 aa10.82□□□□□ -0.68
CDCA3-207ENST00000538862 TRAV12-3A0A0B4J271 114 aa10.82□□□□□ -0.68
CDCA3-207ENST00000538862 PAPPA-AS1Q5QFB9 102 aa10.82□□□□□ -0.68
CDCA3-207ENST00000538862 SUMO4Q6EEV6 95 aa10.82□□□□□ -0.68
CDCA3-207ENST00000538862 TEX29Q8N6K0 151 aa10.82□□□□□ -0.68
CDCA3-207ENST00000538862 SELENOKQ9Y6D0 94 aa10.82□□□□□ -0.68
CDCA3-207ENST00000538862 AGRNO00468 2067 aa10.81□□□□□ -0.68
CDCA3-207ENST00000538862 IGLL5B9A064 214 aa10.81□□□□□ -0.68
CDCA3-207ENST00000538862 SNRPD3P62318 126 aaKnown RBP10.81□□□□□ -0.68
CDCA3-207ENST00000538862 DEFB112Q30KQ8 113 aa10.81□□□□□ -0.68
CDCA3-207ENST00000538862 ZFP2Q6ZN57 461 aa10.81□□□□□ -0.68
CDCA3-207ENST00000538862 C9orf85Q96MD7 179 aa10.81□□□□□ -0.68
CDCA3-207ENST00000538862 A0A0J9YX75 114 aa10.8□□□□□ -0.68
CDCA3-207ENST00000538862 TRBV6-5A0A0K0K1A5 114 aa10.8□□□□□ -0.68
CDCA3-207ENST00000538862 A0A1B0GWB2 263 aa10.8□□□□□ -0.68
CDCA3-207ENST00000538862 IGIPA6NJ69 53 aa10.8□□□□□ -0.68
CDCA3-207ENST00000538862 LGALS9O00182 355 aa10.8□□□□□ -0.68
CDCA3-207ENST00000538862 DUSP14O95147 198 aaKnown RBP10.8□□□□□ -0.68
CDCA3-207ENST00000538862 IGHV4-59P01825 116 aa10.8□□□□□ -0.68
CDCA3-207ENST00000538862 ZNF418Q8TF45 676 aaPredicted RBP10.8□□□□□ -0.68
CDCA3-207ENST00000538862 TMEM141Q96I45 108 aa10.8□□□□□ -0.68
CDCA3-207ENST00000538862 KIR2DL4Q99706 377 aa10.8□□□□□ -0.68
CDCA3-207ENST00000538862 IGHV3-16A0A0C4DH30 117 aa10.8□□□□□ -0.68
CDCA3-207ENST00000538862 CRYGDP07320 174 aa10.8□□□□□ -0.68
CDCA3-207ENST00000538862 DUX5Q96PT3 197 aa10.8□□□□□ -0.68
CDCA3-207ENST00000538862 PRADC1Q9BSG0 188 aa10.8□□□□□ -0.68
CDCA3-207ENST00000538862 JPT2Q9H910 190 aa10.8□□□□□ -0.68
CDCA3-207ENST00000538862 ESM1Q9NQ30 184 aa10.8□□□□□ -0.68
CDCA3-207ENST00000538862 TRBV27A0A0K0K1C4 114 aa10.79□□□□□ -0.68
CDCA3-207ENST00000538862 K7EQG2 157 aa10.79□□□□□ -0.68
CDCA3-207ENST00000538862 TSHBP01222 138 aa10.79□□□□□ -0.68
CDCA3-207ENST00000538862 LGALS1P09382 135 aaKnown RBP10.79□□□□□ -0.68
CDCA3-207ENST00000538862 ZNF688P0C7X2 276 aa10.79□□□□□ -0.68
CDCA3-207ENST00000538862 FOXI2Q6ZQN5 318 aa10.79□□□□□ -0.68
CDCA3-207ENST00000538862 SYT8Q8NBV8 401 aa10.79□□□□□ -0.68
CDCA3-207ENST00000538862 TIMM17AQ99595 171 aa10.79□□□□□ -0.68
CDCA3-207ENST00000538862 GEMIN7Q9H840 131 aaKnown RBP10.79□□□□□ -0.68
CDCA3-207ENST00000538862 TP53TG1Q9Y2A0 90 aa10.79□□□□□ -0.68
CDCA3-207ENST00000538862 F5H697 171 aa10.78□□□□□ -0.68
CDCA3-207ENST00000538862 HILS1P60008 231 aa10.78□□□□□ -0.68
CDCA3-207ENST00000538862 HERV-K104P63124 156 aa10.78□□□□□ -0.68
CDCA3-207ENST00000538862 SMAGPQ0VAQ4 97 aa10.78□□□□□ -0.68
CDCA3-207ENST00000538862 PMVKQ15126 192 aa10.78□□□□□ -0.68
CDCA3-207ENST00000538862 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.78□□□□□ -0.68
CDCA3-207ENST00000538862 TENM1Q9UKZ4 2725 aa10.78□□□□□ -0.68
CDCA3-207ENST00000538862 A0A087WWL8 130 aa10.78□□□□□ -0.68
CDCA3-207ENST00000538862 SDHAF1A6NFY7 115 aa10.78□□□□□ -0.68
CDCA3-207ENST00000538862 IGLV4-69A0A075B6H9 119 aa10.77□□□□□ -0.69
CDCA3-207ENST00000538862 RNF152Q8N8N0 203 aa10.77□□□□□ -0.69
CDCA3-207ENST00000538862 ZNF815PA8K554 130 aa10.76□□□□□ -0.69
CDCA3-207ENST00000538862 HERVK_113P61574 105 aa10.76□□□□□ -0.69
CDCA3-207ENST00000538862 RRN3P1Q2M238 152 aa10.76□□□□□ -0.69
CDCA3-207ENST00000538862 C10orf99Q6UWK7 81 aa10.76□□□□□ -0.69
CDCA3-207ENST00000538862 SPATA25Q9BR10 227 aa10.76□□□□□ -0.69
CDCA3-207ENST00000538862 GTSF1LQ9H1H1 148 aa10.76□□□□□ -0.69
CDCA3-207ENST00000538862 IGHV1OR15-1A0A075B7D0 117 aa10.76□□□□□ -0.69
CDCA3-207ENST00000538862 C11orf86A6NJI1 115 aa10.76□□□□□ -0.69
CDCA3-207ENST00000538862 F8W1H4 67 aa10.76□□□□□ -0.69
CDCA3-207ENST00000538862 ELANEP08246 267 aa10.76□□□□□ -0.69
CDCA3-207ENST00000538862 SPATA3Q8NHX4 192 aa10.76□□□□□ -0.69
CDCA3-207ENST00000538862 MDFICQ9P1T7 246 aa10.76□□□□□ -0.69
CDCA3-207ENST00000538862 ANK2Q01484 3957 aa10.75□□□□□ -0.69
CDCA3-207ENST00000538862 M0QY20 66 aa10.75□□□□□ -0.69
CDCA3-207ENST00000538862 CD300EQ496F6 205 aaPredicted RBP10.75□□□□□ -0.69
CDCA3-207ENST00000538862 Q8N1Y9 231 aa10.75□□□□□ -0.69
CDCA3-207ENST00000538862 DNAJC9-AS1A6NH13 148 aa10.74□□□□□ -0.69
CDCA3-207ENST00000538862 J3QR89 54 aa10.74□□□□□ -0.69
CDCA3-207ENST00000538862 HOXA3O43365 443 aaPredicted RBP10.74□□□□□ -0.69
CDCA3-207ENST00000538862 RHOHQ15669 191 aa10.74□□□□□ -0.69
CDCA3-207ENST00000538862 TRAV12-2A0A075B6T6 113 aa10.74□□□□□ -0.69
CDCA3-207ENST00000538862 SYNJ2BPP57105 145 aa10.74□□□□□ -0.69
CDCA3-207ENST00000538862 RPL39P62891 51 aaKnown RBP10.74□□□□□ -0.69
CDCA3-207ENST00000538862 FAM74A4Q5TZK3 123 aa10.74□□□□□ -0.69
CDCA3-207ENST00000538862 SCGB1D4Q6XE38 83 aa10.74□□□□□ -0.69
CDCA3-207ENST00000538862 TRPT1Q86TN4 253 aaKnown RBP10.74□□□□□ -0.69
CDCA3-207ENST00000538862 RAX2Q96IS3 184 aa10.74□□□□□ -0.69
CDCA3-207ENST00000538862 UBE2E2Q96LR5 201 aa10.74□□□□□ -0.69
CDCA3-207ENST00000538862 VPREB3Q9UKI3 123 aa10.74□□□□□ -0.69
CDCA3-207ENST00000538862 IGKV3-20P01619 116 aa10.73□□□□□ -0.69
CDCA3-207ENST00000538862 NSUN5P1Q3KNT7 163 aa10.73□□□□□ -0.69
CDCA3-207ENST00000538862 ZNF876PQ49A33 203 aa10.73□□□□□ -0.69
CDCA3-207ENST00000538862 MORN3Q6PF18 240 aaPredicted RBP10.73□□□□□ -0.69
CDCA3-207ENST00000538862 MRPL16Q9NX20 251 aaKnown RBP10.73□□□□□ -0.69
CDCA3-207ENST00000538862 TRGV11A0A075B6L2 103 aa10.72□□□□□ -0.69
CDCA3-207ENST00000538862 ZNF56Q15929 161 aa10.72□□□□□ -0.69
CDCA3-207ENST00000538862 SPINK13Q1W4C9 94 aa10.72□□□□□ -0.69
CDCA3-207ENST00000538862 ZNF256Q9Y2P7 627 aaPredicted RBP10.72□□□□□ -0.69
CDCA3-207ENST00000538862 SRSF9Q13242 221 aaKnown RBP eCLIP10.72□□□□□ -0.69
CDCA3-207ENST00000538862 AMTNQ6UX39 209 aa10.72□□□□□ -0.69
CDCA3-207ENST00000538862 PLEKHB2Q96CS7 222 aa10.72□□□□□ -0.69
CDCA3-207ENST00000538862 GAGE12HA6NDE8 117 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms