RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 TNFRSF6BO95407 300 aa9.99□□□□□ -0.81
CD4-208ENST00000538827 FHL2Q14192 279 aa9.99□□□□□ -0.81
CD4-208ENST00000538827 Q6ZTC4 211 aa9.99□□□□□ -0.81
CD4-208ENST00000538827 MAP1LC3AQ9H492 121 aa9.99□□□□□ -0.81
CD4-208ENST00000538827 LOC389332A0A1B0GUA5 103 aa9.98□□□□□ -0.81
CD4-208ENST00000538827 M0QY20 66 aa9.98□□□□□ -0.81
CD4-208ENST00000538827 HIST1H2BKO60814 126 aa9.98□□□□□ -0.81
CD4-208ENST00000538827 HIST1H2BJP06899 126 aa9.98□□□□□ -0.81
CD4-208ENST00000538827 HOXA5P20719 270 aa9.98□□□□□ -0.81
CD4-208ENST00000538827 HIST1H2BOP23527 126 aa9.98□□□□□ -0.81
CD4-208ENST00000538827 HIST1H2BBP33778 126 aa9.98□□□□□ -0.81
CD4-208ENST00000538827 HIST1H2BDP58876 126 aa9.98□□□□□ -0.81
CD4-208ENST00000538827 HIST1H2BCP62807 126 aa9.98□□□□□ -0.81
CD4-208ENST00000538827 HIST2H2BEQ16778 126 aa9.98□□□□□ -0.81
CD4-208ENST00000538827 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.98□□□□□ -0.81
CD4-208ENST00000538827 NRACQ8N912 160 aa9.98□□□□□ -0.81
CD4-208ENST00000538827 HIST1H2BHQ93079 126 aa9.98□□□□□ -0.81
CD4-208ENST00000538827 HIST1H2BNQ99877 126 aa9.98□□□□□ -0.81
CD4-208ENST00000538827 HIST1H2BMQ99879 126 aa9.98□□□□□ -0.81
CD4-208ENST00000538827 RHOHQ15669 191 aa9.97□□□□□ -0.81
CD4-208ENST00000538827 SLC25A29Q8N8R3 303 aa9.97□□□□□ -0.81
CD4-208ENST00000538827 C18orf32Q8TCD1 76 aa9.97□□□□□ -0.81
CD4-208ENST00000538827 PRADC1Q9BSG0 188 aa9.97□□□□□ -0.81
CD4-208ENST00000538827 ST20Q9HBF5 79 aa9.97□□□□□ -0.81
CD4-208ENST00000538827 LAMTOR2Q9Y2Q5 125 aa9.97□□□□□ -0.81
CD4-208ENST00000538827 A0A0J9YY99 117 aa9.96□□□□□ -0.82
CD4-208ENST00000538827 LOC100131303A0A0U1RQF7 123 aa9.96□□□□□ -0.82
CD4-208ENST00000538827 GAGE12JA6NER3 117 aa9.96□□□□□ -0.82
CD4-208ENST00000538827 PPP1R17O96001 155 aa9.96□□□□□ -0.82
CD4-208ENST00000538827 GAGE1Q13065 139 aa9.96□□□□□ -0.82
CD4-208ENST00000538827 GAGE4Q13068 117 aa9.96□□□□□ -0.82
CD4-208ENST00000538827 GAGE5Q13069 117 aa9.96□□□□□ -0.82
CD4-208ENST00000538827 GAGE13Q4V321 117 aa9.96□□□□□ -0.82
CD4-208ENST00000538827 CASC10Q5T4H9 136 aa9.96□□□□□ -0.82
CD4-208ENST00000538827 BAGE3Q86Y29 109 aa9.96□□□□□ -0.82
CD4-208ENST00000538827 NEXN-AS1Q8NBZ9 246 aa9.96□□□□□ -0.82
CD4-208ENST00000538827 NIT2Q9NQR4 276 aa9.96□□□□□ -0.82
CD4-208ENST00000538827 TNFRSF18Q9Y5U5 241 aa9.96□□□□□ -0.82
CD4-208ENST00000538827 LCE6AA0A183 80 aa9.95□□□□□ -0.82
CD4-208ENST00000538827 PAX4O43316 350 aa9.95□□□□□ -0.82
CD4-208ENST00000538827 NDUFA6P56556 154 aa9.95□□□□□ -0.82
CD4-208ENST00000538827 RPL36AP83881 106 aaKnown RBP9.95□□□□□ -0.82
CD4-208ENST00000538827 RNASEKQ6P5S7 137 aaKnown RBP9.95□□□□□ -0.82
CD4-208ENST00000538827 NEGR1Q7Z3B1 354 aa9.95□□□□□ -0.82
CD4-208ENST00000538827 RPL36ALQ969Q0 106 aaKnown RBP9.95□□□□□ -0.82
CD4-208ENST00000538827 EDA2RQ9HAV5 297 aa9.95□□□□□ -0.82
CD4-208ENST00000538827 PRO0255Q9UI72 69 aa9.95□□□□□ -0.82
CD4-208ENST00000538827 HHLA3Q9XRX5 114 aa9.95□□□□□ -0.82
CD4-208ENST00000538827 STAB2Q8WWQ8 2551 aa9.95□□□□□ -0.82
CD4-208ENST00000538827 LYSTQ99698 3801 aa9.94□□□□□ -0.82
CD4-208ENST00000538827 DEFB131BA0A096LNP1 70 aa9.94□□□□□ -0.82
CD4-208ENST00000538827 TRBV6-4A0A1B0GX49 114 aa9.94□□□□□ -0.82
CD4-208ENST00000538827 CRYBA4P53673 196 aa9.94□□□□□ -0.82
CD4-208ENST00000538827 SUMO2P61956 95 aaKnown RBP9.94□□□□□ -0.82
CD4-208ENST00000538827 FA2HQ7L5A8 372 aa9.94□□□□□ -0.82
CD4-208ENST00000538827 ZNRF2Q8NHG8 242 aa9.94□□□□□ -0.82
CD4-208ENST00000538827 PRSS3P2Q8NHM4 247 aa9.94□□□□□ -0.82
CD4-208ENST00000538827 PHLDA1Q8WV24 401 aaPredicted RBP9.94□□□□□ -0.82
CD4-208ENST00000538827 SMIM2Q9BVW6 85 aa9.94□□□□□ -0.82
CD4-208ENST00000538827 DNAH7Q8WXX0 4024 aa9.93□□□□□ -0.82
CD4-208ENST00000538827 TRAV26-1A0A087WT03 109 aa9.93□□□□□ -0.82
CD4-208ENST00000538827 TRBV10-1A0A0K0K1A3 114 aa9.93□□□□□ -0.82
CD4-208ENST00000538827 SDHAF1A6NFY7 115 aa9.93□□□□□ -0.82
CD4-208ENST00000538827 S100A6P06703 90 aa9.93□□□□□ -0.82
CD4-208ENST00000538827 GYPEP15421 78 aa9.93□□□□□ -0.82
CD4-208ENST00000538827 PMCHP20382 165 aa9.93□□□□□ -0.82
CD4-208ENST00000538827 DEFB104AQ8WTQ1 72 aa9.93□□□□□ -0.82
CD4-208ENST00000538827 DNAJC30Q96LL9 226 aa9.93□□□□□ -0.82
CD4-208ENST00000538827 C20orf78Q9BR46 151 aa9.93□□□□□ -0.82
CD4-208ENST00000538827 Q9UF83 564 aa9.93□□□□□ -0.82
CD4-208ENST00000538827 TRAV10A0A0B4J240 114 aa9.92□□□□□ -0.82
CD4-208ENST00000538827 IGHV3-38A0A0C4DH36 116 aa9.92□□□□□ -0.82
CD4-208ENST00000538827 TRBV6-5A0A0K0K1A5 114 aa9.92□□□□□ -0.82
CD4-208ENST00000538827 IFI27P40305 119 aaPredicted RBP9.92□□□□□ -0.82
CD4-208ENST00000538827 Q0VG73 95 aa9.92□□□□□ -0.82
CD4-208ENST00000538827 MUC7Q8TAX7 377 aa9.92□□□□□ -0.82
CD4-208ENST00000538827 TMEM70Q9BUB7 260 aa9.92□□□□□ -0.82
CD4-208ENST00000538827 SERF1AO75920 110 aa9.91□□□□□ -0.82
CD4-208ENST00000538827 Q8N8P6 123 aa9.91□□□□□ -0.82
CD4-208ENST00000538827 NXT2Q9NPJ8 142 aaKnown RBP9.91□□□□□ -0.82
CD4-208ENST00000538827 TRBV7-3A0A075B6L6 115 aa9.9□□□□□ -0.82
CD4-208ENST00000538827 A0A096LPF7 62 aa9.9□□□□□ -0.82
CD4-208ENST00000538827 TCAPO15273 167 aa9.9□□□□□ -0.82
CD4-208ENST00000538827 VSIG2Q96IQ7 327 aa9.9□□□□□ -0.82
CD4-208ENST00000538827 FCER1GP30273 86 aa9.89□□□□□ -0.83
CD4-208ENST00000538827 UBE2D3P61077 147 aa9.89□□□□□ -0.83
CD4-208ENST00000538827 UBE2D2P62837 147 aa9.89□□□□□ -0.83
CD4-208ENST00000538827 NIT1Q86X76 327 aa9.89□□□□□ -0.83
CD4-208ENST00000538827 ICOSQ9Y6W8 199 aa9.89□□□□□ -0.83
CD4-208ENST00000538827 HYDINQ4G0P3 5121 aa9.89□□□□□ -0.83
CD4-208ENST00000538827 I3L3M4 83 aa9.88□□□□□ -0.83
CD4-208ENST00000538827 VCYO14598 125 aa9.88□□□□□ -0.83
CD4-208ENST00000538827 HSBP1O75506 76 aa9.88□□□□□ -0.83
CD4-208ENST00000538827 LINC00614P0C842 121 aa9.88□□□□□ -0.83
CD4-208ENST00000538827 POLR2KP53803 58 aaKnown RBP9.88□□□□□ -0.83
CD4-208ENST00000538827 PDZD11Q5EBL8 140 aa9.88□□□□□ -0.83
CD4-208ENST00000538827 URB1-AS1Q96HZ7 61 aa9.88□□□□□ -0.83
CD4-208ENST00000538827 KIR2DL4Q99706 377 aa9.88□□□□□ -0.83
CD4-208ENST00000538827 IGLV2-18A0A075B6J9 118 aa9.87□□□□□ -0.83
CD4-208ENST00000538827 TRBV27A0A0K0K1C4 114 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms