RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 MRPL16Q9NX20 251 aaKnown RBP14.79□□□□□ -0.04
DDX55-205ENST00000538744 LINC01549A6NIU2 74 aa14.78□□□□□ -0.04
DDX55-205ENST00000538744 LBHQ53QV2 105 aaPredicted RBP14.78□□□□□ -0.04
DDX55-205ENST00000538744 ZFP2Q6ZN57 461 aa14.78□□□□□ -0.04
DDX55-205ENST00000538744 IL17DQ8TAD2 202 aa14.78□□□□□ -0.04
DDX55-205ENST00000538744 IGHV3-73A0A0B4J1V6 119 aa14.78□□□□□ -0.04
DDX55-205ENST00000538744 EREGO14944 169 aa14.78□□□□□ -0.04
DDX55-205ENST00000538744 RNASE8Q8TDE3 154 aaKnown RBP14.78□□□□□ -0.04
DDX55-205ENST00000538744 TMEM263Q8WUH6 116 aaKnown RBP14.78□□□□□ -0.04
DDX55-205ENST00000538744 SNHG12Q9BXW3 62 aa14.78□□□□□ -0.04
DDX55-205ENST00000538744 NACAE9PAV3 2078 aa14.77□□□□□ -0.04
DDX55-205ENST00000538744 ZMAT4Q9H898 229 aa14.77□□□□□ -0.05
DDX55-205ENST00000538744 CYSLTR1Q9Y271 337 aa14.77□□□□□ -0.05
DDX55-205ENST00000538744 RS1O15537 224 aa14.76□□□□□ -0.05
DDX55-205ENST00000538744 GTSCR1Q86UQ5 136 aa14.76□□□□□ -0.05
DDX55-205ENST00000538744 RIPPLY3P57055 190 aa14.75□□□□□ -0.05
DDX55-205ENST00000538744 SLC25A34Q6PIV7 304 aa14.75□□□□□ -0.05
DDX55-205ENST00000538744 ERASQ7Z444 233 aa14.75□□□□□ -0.05
DDX55-205ENST00000538744 A0A087WX48 190 aa14.75□□□□□ -0.05
DDX55-205ENST00000538744 TRAV12-1A0A0B4J245 112 aa14.75□□□□□ -0.05
DDX55-205ENST00000538744 DPM2O94777 84 aa14.75□□□□□ -0.05
DDX55-205ENST00000538744 I3L3M4 83 aa14.74□□□□□ -0.05
DDX55-205ENST00000538744 IGKCP01834 107 aa14.74□□□□□ -0.05
DDX55-205ENST00000538744 RHOHQ15669 191 aa14.74□□□□□ -0.05
DDX55-205ENST00000538744 ANKRD39Q53RE8 183 aa14.74□□□□□ -0.05
DDX55-205ENST00000538744 C2orf88Q9BSF0 95 aa14.74□□□□□ -0.05
DDX55-205ENST00000538744 TP53TG1Q9Y2A0 90 aa14.74□□□□□ -0.05
DDX55-205ENST00000538744 MRPS16Q9Y3D3 137 aaKnown RBP14.74□□□□□ -0.05
DDX55-205ENST00000538744 NIPBLQ6KC79 2804 aaeCLIP14.73□□□□□ -0.05
DDX55-205ENST00000538744 CSNK1G2-AS1Q8NCQ2 148 aa14.73□□□□□ -0.05
DDX55-205ENST00000538744 SPATA3Q8NHX4 192 aa14.73□□□□□ -0.05
DDX55-205ENST00000538744 TRGV1A0A0A0MS02 117 aa14.72□□□□□ -0.05
DDX55-205ENST00000538744 COX8AP10176 69 aa14.72□□□□□ -0.05
DDX55-205ENST00000538744 STPG4Q8N801 248 aa14.72□□□□□ -0.05
DDX55-205ENST00000538744 C16orf74Q96GX8 76 aa14.72□□□□□ -0.05
DDX55-205ENST00000538744 TSHBP01222 138 aa14.72□□□□□ -0.05
DDX55-205ENST00000538744 IGHV3-53P01767 116 aa14.72□□□□□ -0.05
DDX55-205ENST00000538744 NEXN-AS1Q8NBZ9 246 aa14.72□□□□□ -0.05
DDX55-205ENST00000538744 DEFB104AQ8WTQ1 72 aa14.72□□□□□ -0.05
DDX55-205ENST00000538744 MRPL35Q9NZE8 188 aaKnown RBP14.72□□□□□ -0.05
DDX55-205ENST00000538744 P0DMU3 169 aa14.71□□□□□ -0.05
DDX55-205ENST00000538744 FAM231AP0DMU4 169 aa14.71□□□□□ -0.05
DDX55-205ENST00000538744 FAM231CP0DMU5 169 aa14.71□□□□□ -0.05
DDX55-205ENST00000538744 Q6ZSN1 163 aa14.71□□□□□ -0.05
DDX55-205ENST00000538744 BAALCQ8WXS3 180 aa14.71□□□□□ -0.05
DDX55-205ENST00000538744 TNFRSF18Q9Y5U5 241 aa14.71□□□□□ -0.05
DDX55-205ENST00000538744 PLNP26678 52 aa14.7□□□□□ -0.06
DDX55-205ENST00000538744 JMJD1CQ15652 2540 aa14.7□□□□□ -0.06
DDX55-205ENST00000538744 F8VRH5 84 aa14.69□□□□□ -0.06
DDX55-205ENST00000538744 DAZ2Q13117 558 aaKnown RBP14.69□□□□□ -0.06
DDX55-205ENST00000538744 OR4C5Q8NGB2 326 aa14.69□□□□□ -0.06
DDX55-205ENST00000538744 TMEM141Q96I45 108 aa14.69□□□□□ -0.06
DDX55-205ENST00000538744 DNAJC30Q96LL9 226 aa14.69□□□□□ -0.06
DDX55-205ENST00000538744 HHLA3Q9XRX5 114 aa14.69□□□□□ -0.06
DDX55-205ENST00000538744 F8P00451 2351 aa14.69□□□□□ -0.06
DDX55-205ENST00000538744 RPL39P62891 51 aaKnown RBP14.69□□□□□ -0.06
DDX55-205ENST00000538744 RRN3P1Q2M238 152 aa14.69□□□□□ -0.06
DDX55-205ENST00000538744 TIMM17AQ99595 171 aa14.69□□□□□ -0.06
DDX55-205ENST00000538744 TP73-AS1Q9UF72 201 aa14.69□□□□□ -0.06
DDX55-205ENST00000538744 CHTOPQ9Y3Y2 248 aaKnown RBP14.69□□□□□ -0.06
DDX55-205ENST00000538744 IGIPA6NJ69 53 aa14.68□□□□□ -0.06
DDX55-205ENST00000538744 Q6ZTI0 123 aa14.68□□□□□ -0.06
DDX55-205ENST00000538744 NOP10Q9NPE3 64 aaKnown RBP14.67□□□□□ -0.06
DDX55-205ENST00000538744 TRAV4A0A0B4J268 109 aa14.66□□□□□ -0.06
DDX55-205ENST00000538744 PLAC8L1A1L4L8 177 aa14.66□□□□□ -0.06
DDX55-205ENST00000538744 BATFQ16520 125 aa14.66□□□□□ -0.06
DDX55-205ENST00000538744 C20orf203Q8NBC4 194 aa14.66□□□□□ -0.06
DDX55-205ENST00000538744 PRSS29PA6NIE9 313 aa14.65□□□□□ -0.06
DDX55-205ENST00000538744 FGF6P10767 208 aa14.65□□□□□ -0.06
DDX55-205ENST00000538744 TCTAP57738 103 aa14.65□□□□□ -0.06
DDX55-205ENST00000538744 ZC2HC1BQ5TFG8 222 aa14.65□□□□□ -0.06
DDX55-205ENST00000538744 FLNBO75369 2602 aaKnown RBP14.64□□□□□ -0.07
DDX55-205ENST00000538744 NMUP48645 174 aa14.64□□□□□ -0.07
DDX55-205ENST00000538744 WFDC9Q8NEX5 89 aa14.64□□□□□ -0.07
DDX55-205ENST00000538744 ZNF479Q96JC4 524 aa14.64□□□□□ -0.07
DDX55-205ENST00000538744 OVOL2Q9BRP0 275 aa14.64□□□□□ -0.07
DDX55-205ENST00000538744 TENM1Q9UKZ4 2725 aa14.64□□□□□ -0.07
DDX55-205ENST00000538744 PMVKQ15126 192 aa14.63□□□□□ -0.07
DDX55-205ENST00000538744 BOD1L2Q8IYS8 172 aa14.63□□□□□ -0.07
DDX55-205ENST00000538744 Q9UF83 564 aa14.63□□□□□ -0.07
DDX55-205ENST00000538744 TEP1Q99973 2627 aaKnown RBP14.63□□□□□ -0.07
DDX55-205ENST00000538744 DLEU1O43261 78 aa14.63□□□□□ -0.07
DDX55-205ENST00000538744 HINT1P49773 126 aaPredicted RBP14.61□□□□□ -0.07
DDX55-205ENST00000538744 A0A1B0GV90 55 aa14.61□□□□□ -0.07
DDX55-205ENST00000538744 C2orf91Q6ZV80 131 aa14.61□□□□□ -0.07
DDX55-205ENST00000538744 CST9LQ9H4G1 147 aa14.61□□□□□ -0.07
DDX55-205ENST00000538744 IGKV2D-26A0A0A0MRZ7 120 aa14.6□□□□□ -0.07
DDX55-205ENST00000538744 GAGE12BA1L429 117 aa14.6□□□□□ -0.07
DDX55-205ENST00000538744 K7EQD1 137 aa14.6□□□□□ -0.07
DDX55-205ENST00000538744 GAGE7O76087 117 aa14.6□□□□□ -0.07
DDX55-205ENST00000538744 GAGE12FP0CL80 117 aa14.6□□□□□ -0.07
DDX55-205ENST00000538744 GAGE12GP0CL81 117 aa14.6□□□□□ -0.07
DDX55-205ENST00000538744 GAGE12IP0CL82 117 aa14.6□□□□□ -0.07
DDX55-205ENST00000538744 KRTAP24-1Q3LI83 254 aa14.6□□□□□ -0.07
DDX55-205ENST00000538744 PCP2Q8IVA1 136 aa14.6□□□□□ -0.07
DDX55-205ENST00000538744 TRGV2A0A075B6R0 118 aa14.59□□□□□ -0.07
DDX55-205ENST00000538744 TRBV10-1A0A0K0K1A3 114 aa14.59□□□□□ -0.07
DDX55-205ENST00000538744 WIPF1O43516 503 aa14.59□□□□□ -0.07
DDX55-205ENST00000538744 CIDEAO60543 219 aa14.59□□□□□ -0.07
DDX55-205ENST00000538744 COL5A1-AS1Q5SY13 56 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms