RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 RHOHQ15669 191 aa6.76□□□□□ -1.33
SNHG1-209ENST00000538654 DEFB121Q5J5C9 76 aa6.76□□□□□ -1.33
SNHG1-209ENST00000538654 IGHV3-49A0A0A0MS15 119 aa6.75□□□□□ -1.33
SNHG1-209ENST00000538654 TRBV7-7A0A0K0K1E9 115 aa6.75□□□□□ -1.33
SNHG1-209ENST00000538654 RNASE3P12724 160 aaKnown RBP6.75□□□□□ -1.33
SNHG1-209ENST00000538654 ROS1P08922 2347 aa6.75□□□□□ -1.33
SNHG1-209ENST00000538654 TRIAP1O43715 76 aa6.75□□□□□ -1.33
SNHG1-209ENST00000538654 RNASE4P34096 147 aaKnown RBP6.75□□□□□ -1.33
SNHG1-209ENST00000538654 LINC00315P59091 139 aa6.75□□□□□ -1.33
SNHG1-209ENST00000538654 NSUN5P1Q3KNT7 163 aa6.75□□□□□ -1.33
SNHG1-209ENST00000538654 SUMO4Q6EEV6 95 aa6.75□□□□□ -1.33
SNHG1-209ENST00000538654 TMEM101Q96IK0 257 aa6.75□□□□□ -1.33
SNHG1-209ENST00000538654 IMUPQ9GZP8 106 aa6.75□□□□□ -1.33
SNHG1-209ENST00000538654 PKDREJQ9NTG1 2253 aa6.75□□□□□ -1.33
SNHG1-209ENST00000538654 C1orf195Q5TG92 126 aa6.74□□□□□ -1.33
SNHG1-209ENST00000538654 C20orf173Q96LM9 149 aa6.74□□□□□ -1.33
SNHG1-209ENST00000538654 FAM19A4Q96LR4 140 aa6.74□□□□□ -1.33
SNHG1-209ENST00000538654 ICOSQ9Y6W8 199 aa6.74□□□□□ -1.33
SNHG1-209ENST00000538654 H7C423 109 aa6.74□□□□□ -1.33
SNHG1-209ENST00000538654 ACYP1P07311 99 aa6.74□□□□□ -1.33
SNHG1-209ENST00000538654 LY6DQ14210 128 aa6.74□□□□□ -1.33
SNHG1-209ENST00000538654 ZNF56Q15929 161 aa6.74□□□□□ -1.33
SNHG1-209ENST00000538654 ZDBF2Q9HCK1 2354 aa6.74□□□□□ -1.33
SNHG1-209ENST00000538654 ZZEF1O43149 2961 aa6.74□□□□□ -1.33
SNHG1-209ENST00000538654 A0A0J9YXY3 114 aa6.74□□□□□ -1.33
SNHG1-209ENST00000538654 ATP6V0E1O15342 81 aa6.74□□□□□ -1.33
SNHG1-209ENST00000538654 GNRH2O43555 120 aa6.74□□□□□ -1.33
SNHG1-209ENST00000538654 ZNF22P17026 224 aaPredicted RBP6.73□□□□□ -1.33
SNHG1-209ENST00000538654 ARHGAP32A7KAX9 2087 aa6.73□□□□□ -1.33
SNHG1-209ENST00000538654 SPANXCQ9NY87 97 aa6.73□□□□□ -1.33
SNHG1-209ENST00000538654 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.72□□□□□ -1.33
SNHG1-209ENST00000538654 K7EMT4 169 aa6.72□□□□□ -1.33
SNHG1-209ENST00000538654 FAM223BA6NKX1 122 aa6.72□□□□□ -1.33
SNHG1-209ENST00000538654 SOCS3O14543 225 aa6.72□□□□□ -1.33
SNHG1-209ENST00000538654 FAM223AQ8IWN6 122 aa6.72□□□□□ -1.33
SNHG1-209ENST00000538654 FAM236DA0A1B0GTK5 79 aa6.71□□□□□ -1.33
SNHG1-209ENST00000538654 LST1O00453 97 aa6.71□□□□□ -1.33
SNHG1-209ENST00000538654 FAM236CP0DP71 79 aa6.71□□□□□ -1.33
SNHG1-209ENST00000538654 UBE2E1P51965 193 aa6.71□□□□□ -1.33
SNHG1-209ENST00000538654 UBE2E2Q96LR5 201 aa6.71□□□□□ -1.33
SNHG1-209ENST00000538654 TIMM21Q9BVV7 248 aa6.71□□□□□ -1.33
SNHG1-209ENST00000538654 ATP5G1P05496 136 aa6.71□□□□□ -1.34
SNHG1-209ENST00000538654 CHCHD5Q9BSY4 110 aa6.71□□□□□ -1.34
SNHG1-209ENST00000538654 PRSS2P07478 247 aa6.7□□□□□ -1.34
SNHG1-209ENST00000538654 TMEM86BQ8N661 226 aa6.7□□□□□ -1.34
SNHG1-209ENST00000538654 C20orf203Q8NBC4 194 aa6.7□□□□□ -1.34
SNHG1-209ENST00000538654 LINC01587Q99440 93 aa6.7□□□□□ -1.34
SNHG1-209ENST00000538654 PRO3102Q9H379 93 aa6.7□□□□□ -1.34
SNHG1-209ENST00000538654 ZNF256Q9Y2P7 627 aaPredicted RBP6.7□□□□□ -1.34
SNHG1-209ENST00000538654 TRGV11A0A075B6L2 103 aa6.7□□□□□ -1.34
SNHG1-209ENST00000538654 G3V318 75 aa6.7□□□□□ -1.34
SNHG1-209ENST00000538654 NDUFA4O00483 81 aa6.7□□□□□ -1.34
SNHG1-209ENST00000538654 IGHV3-30-3P0DP02 117 aa6.7□□□□□ -1.34
SNHG1-209ENST00000538654 MIAQ16674 131 aa6.7□□□□□ -1.34
SNHG1-209ENST00000538654 MUC4Q99102 2169 aa6.7□□□□□ -1.34
SNHG1-209ENST00000538654 TNRC18O15417 2968 aaPredicted RBP6.7□□□□□ -1.34
SNHG1-209ENST00000538654 WNK2Q9Y3S1 2297 aa6.69□□□□□ -1.34
SNHG1-209ENST00000538654 IGHV3-64A0A075B6Q5 118 aa6.69□□□□□ -1.34
SNHG1-209ENST00000538654 KLLNB2CW77 178 aa6.69□□□□□ -1.34
SNHG1-209ENST00000538654 FAM229AH3BQW9 127 aa6.69□□□□□ -1.34
SNHG1-209ENST00000538654 LITAFQ99732 161 aa6.69□□□□□ -1.34
SNHG1-209ENST00000538654 PRO0628Q9UI54 55 aa6.69□□□□□ -1.34
SNHG1-209ENST00000538654 GPR179Q6PRD1 2367 aa6.69□□□□□ -1.34
SNHG1-209ENST00000538654 RP1L1Q8IWN7 2480 aaPredicted RBP6.69□□□□□ -1.34
SNHG1-209ENST00000538654 CFAP47Q6ZTR5 3102 aa6.69□□□□□ -1.34
SNHG1-209ENST00000538654 A0A0J9YXV3 536 aa6.69□□□□□ -1.34
SNHG1-209ENST00000538654 I3L3M4 83 aa6.69□□□□□ -1.34
SNHG1-209ENST00000538654 HOXD3P31249 432 aaPredicted RBP6.69□□□□□ -1.34
SNHG1-209ENST00000538654 IGLV4-3A0A075B6K6 122 aa6.69□□□□□ -1.34
SNHG1-209ENST00000538654 M0QY20 66 aa6.69□□□□□ -1.34
SNHG1-209ENST00000538654 DNAJC30Q96LL9 226 aa6.69□□□□□ -1.34
SNHG1-209ENST00000538654 TPRP12270 2363 aaKnown RBP6.68□□□□□ -1.34
SNHG1-209ENST00000538654 TIMM17BO60830 172 aa6.68□□□□□ -1.34
SNHG1-209ENST00000538654 DEFB124Q8NES8 71 aa6.68□□□□□ -1.34
SNHG1-209ENST00000538654 OPRPNQ99935 248 aaPredicted RBP6.68□□□□□ -1.34
SNHG1-209ENST00000538654 JPT2Q9H910 190 aa6.68□□□□□ -1.34
SNHG1-209ENST00000538654 PYGO1Q9Y3Y4 419 aa6.68□□□□□ -1.34
SNHG1-209ENST00000538654 KALRNO60229 2985 aa6.68□□□□□ -1.34
SNHG1-209ENST00000538654 IGHV1-58A0A0C4DH39 117 aa6.68□□□□□ -1.34
SNHG1-209ENST00000538654 FAM236AA0A1B0GUQ0 79 aa6.68□□□□□ -1.34
SNHG1-209ENST00000538654 FAM236BA0A1B0GV22 79 aa6.68□□□□□ -1.34
SNHG1-209ENST00000538654 UQCRQO14949 82 aa6.68□□□□□ -1.34
SNHG1-209ENST00000538654 MRPS36P82909 103 aaKnown RBP6.68□□□□□ -1.34
SNHG1-209ENST00000538654 C9orf153Q5TBE3 101 aa6.68□□□□□ -1.34
SNHG1-209ENST00000538654 FAM74A4Q5TZK3 123 aa6.68□□□□□ -1.34
SNHG1-209ENST00000538654 LINC00643Q86TS7 51 aa6.68□□□□□ -1.34
SNHG1-209ENST00000538654 TMEM61Q8N0U2 210 aa6.68□□□□□ -1.34
SNHG1-209ENST00000538654 C3orf22Q8N5N4 141 aa6.68□□□□□ -1.34
SNHG1-209ENST00000538654 DEFB104AQ8WTQ1 72 aa6.68□□□□□ -1.34
SNHG1-209ENST00000538654 C2orf48Q96LS8 159 aa6.68□□□□□ -1.34
SNHG1-209ENST00000538654 NDUFA12Q9UI09 145 aa6.68□□□□□ -1.34
SNHG1-209ENST00000538654 DMDP11532 3685 aa6.68□□□□□ -1.34
SNHG1-209ENST00000538654 TRAV41A0A0B4J266 112 aa6.67□□□□□ -1.34
SNHG1-209ENST00000538654 CLEC2BQ92478 149 aa6.67□□□□□ -1.34
SNHG1-209ENST00000538654 C9orf85Q96MD7 179 aa6.67□□□□□ -1.34
SNHG1-209ENST00000538654 NCOR1O75376 2440 aa6.66□□□□□ -1.34
SNHG1-209ENST00000538654 POLEQ07864 2286 aa6.66□□□□□ -1.34
SNHG1-209ENST00000538654 F6UB75 175 aa6.66□□□□□ -1.34
SNHG1-209ENST00000538654 OR13C6PQ8NH95 151 aa6.66□□□□□ -1.34
SNHG1-209ENST00000538654 RBMY1CP0DJD4 496 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms