RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 ZNF415Q09FC8 603 aa10.21□□□□□ -0.77
ACTN1-205ENST00000538545 POLR2KP53803 58 aaKnown RBP10.21□□□□□ -0.78
ACTN1-205ENST00000538545 C2orf66Q6UXQ4 117 aa10.21□□□□□ -0.78
ACTN1-205ENST00000538545 C20orf78Q9BR46 151 aa10.21□□□□□ -0.78
ACTN1-205ENST00000538545 TTTY13Q9BZ97 58 aa10.21□□□□□ -0.78
ACTN1-205ENST00000538545 TRGV1A0A0A0MS02 117 aa10.2□□□□□ -0.78
ACTN1-205ENST00000538545 Q6ZTI0 123 aa10.2□□□□□ -0.78
ACTN1-205ENST00000538545 ODF1Q14990 250 aa10.2□□□□□ -0.78
ACTN1-205ENST00000538545 CFAP126Q5VTH2 177 aa10.2□□□□□ -0.78
ACTN1-205ENST00000538545 EMP1P54849 157 aa10.2□□□□□ -0.78
ACTN1-205ENST00000538545 NUTF2P61970 127 aaKnown RBP10.2□□□□□ -0.78
ACTN1-205ENST00000538545 OPRPNQ99935 248 aaPredicted RBP10.2□□□□□ -0.78
ACTN1-205ENST00000538545 IGHV3-38A0A0C4DH36 116 aa10.19□□□□□ -0.78
ACTN1-205ENST00000538545 SCGB3A1Q96QR1 104 aa10.19□□□□□ -0.78
ACTN1-205ENST00000538545 NOP10Q9NPE3 64 aaKnown RBP10.19□□□□□ -0.78
ACTN1-205ENST00000538545 MRPL35Q9NZE8 188 aaKnown RBP10.19□□□□□ -0.78
ACTN1-205ENST00000538545 UQCR10Q9UDW1 63 aa10.19□□□□□ -0.78
ACTN1-205ENST00000538545 TMEM238LA0A1B0GVL6 79 aa10.19□□□□□ -0.78
ACTN1-205ENST00000538545 LGALS9BQ3B8N2 356 aa10.19□□□□□ -0.78
ACTN1-205ENST00000538545 LGALS9CQ6DKI2 356 aa10.19□□□□□ -0.78
ACTN1-205ENST00000538545 ZFP2Q6ZN57 461 aa10.19□□□□□ -0.78
ACTN1-205ENST00000538545 CITED1Q99966 193 aa10.19□□□□□ -0.78
ACTN1-205ENST00000538545 TP53TG1Q9Y2A0 90 aa10.19□□□□□ -0.78
ACTN1-205ENST00000538545 NOTCH1P46531 2555 aa10.19□□□□□ -0.78
ACTN1-205ENST00000538545 RNASE8Q8TDE3 154 aaKnown RBP10.18□□□□□ -0.78
ACTN1-205ENST00000538545 A0A1B0GV90 55 aa10.18□□□□□ -0.78
ACTN1-205ENST00000538545 HSBP1L1C9JCN9 74 aa10.18□□□□□ -0.78
ACTN1-205ENST00000538545 HNRNPA3P51991 378 aaKnown RBP10.18□□□□□ -0.78
ACTN1-205ENST00000538545 RIPPLY3P57055 190 aa10.18□□□□□ -0.78
ACTN1-205ENST00000538545 ZNF479Q96JC4 524 aa10.18□□□□□ -0.78
ACTN1-205ENST00000538545 PHLDA1Q8WV24 401 aaPredicted RBP10.17□□□□□ -0.78
ACTN1-205ENST00000538545 ANK2Q01484 3957 aa10.17□□□□□ -0.78
ACTN1-205ENST00000538545 ORMDL2Q53FV1 153 aa10.17□□□□□ -0.78
ACTN1-205ENST00000538545 UFSP1Q6NVU6 142 aa10.17□□□□□ -0.78
ACTN1-205ENST00000538545 TOMM6Q96B49 74 aa10.17□□□□□ -0.78
ACTN1-205ENST00000538545 IGKV2D-26A0A0A0MRZ7 120 aa10.16□□□□□ -0.78
ACTN1-205ENST00000538545 GTSCR1Q86UQ5 136 aa10.16□□□□□ -0.78
ACTN1-205ENST00000538545 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.16□□□□□ -0.78
ACTN1-205ENST00000538545 TSHBP01222 138 aa10.16□□□□□ -0.78
ACTN1-205ENST00000538545 NMUP48645 174 aa10.16□□□□□ -0.78
ACTN1-205ENST00000538545 HINT1P49773 126 aaPredicted RBP10.16□□□□□ -0.78
ACTN1-205ENST00000538545 KRTAP24-1Q3LI83 254 aa10.16□□□□□ -0.78
ACTN1-205ENST00000538545 PCP2Q8IVA1 136 aa10.16□□□□□ -0.78
ACTN1-205ENST00000538545 CSNK1G2-AS1Q8NCQ2 148 aa10.16□□□□□ -0.78
ACTN1-205ENST00000538545 KIR2DL4Q99706 377 aa10.16□□□□□ -0.78
ACTN1-205ENST00000538545 VCYO14598 125 aa10.15□□□□□ -0.78
ACTN1-205ENST00000538545 PLAC8L1A1L4L8 177 aa10.15□□□□□ -0.78
ACTN1-205ENST00000538545 CEMP1Q6PRD7 247 aaPredicted RBP10.15□□□□□ -0.78
ACTN1-205ENST00000538545 HHLA3Q9XRX5 114 aa10.15□□□□□ -0.78
ACTN1-205ENST00000538545 TRBV27A0A0K0K1C4 114 aa10.15□□□□□ -0.79
ACTN1-205ENST00000538545 CLUHP3Q96NS8 147 aa10.15□□□□□ -0.79
ACTN1-205ENST00000538545 GAGE12BA1L429 117 aa10.14□□□□□ -0.79
ACTN1-205ENST00000538545 A8MWV9 139 aa10.14□□□□□ -0.79
ACTN1-205ENST00000538545 ATP5LO75964 103 aa10.14□□□□□ -0.79
ACTN1-205ENST00000538545 GAGE7O76087 117 aa10.14□□□□□ -0.79
ACTN1-205ENST00000538545 GAGE12FP0CL80 117 aa10.14□□□□□ -0.79
ACTN1-205ENST00000538545 GAGE12GP0CL81 117 aa10.14□□□□□ -0.79
ACTN1-205ENST00000538545 GAGE12IP0CL82 117 aa10.14□□□□□ -0.79
ACTN1-205ENST00000538545 BAALCQ8WXS3 180 aa10.14□□□□□ -0.79
ACTN1-205ENST00000538545 M0R143 59 aa10.14□□□□□ -0.79
ACTN1-205ENST00000538545 PPP1R17O96001 155 aa10.14□□□□□ -0.79
ACTN1-205ENST00000538545 RNASE13Q5GAN3 156 aaKnown RBP10.14□□□□□ -0.79
ACTN1-205ENST00000538545 DEFB4AO15263 64 aa10.13□□□□□ -0.79
ACTN1-205ENST00000538545 Q6ZVH6 145 aa10.13□□□□□ -0.79
ACTN1-205ENST00000538545 NEXN-AS1Q8NBZ9 246 aa10.13□□□□□ -0.79
ACTN1-205ENST00000538545 TRBV6-5A0A0K0K1A5 114 aa10.13□□□□□ -0.79
ACTN1-205ENST00000538545 IGKCP01834 107 aa10.13□□□□□ -0.79
ACTN1-205ENST00000538545 OR4C5Q8NGB2 326 aa10.13□□□□□ -0.79
ACTN1-205ENST00000538545 TMEM263Q8WUH6 116 aaKnown RBP10.13□□□□□ -0.79
ACTN1-205ENST00000538545 SLC25A34Q6PIV7 304 aa10.12□□□□□ -0.79
ACTN1-205ENST00000538545 CYSLTR1Q9Y271 337 aa10.12□□□□□ -0.79
ACTN1-205ENST00000538545 PRSS29PA6NIE9 313 aa10.12□□□□□ -0.79
ACTN1-205ENST00000538545 OXLD1Q5BKU9 147 aa10.12□□□□□ -0.79
ACTN1-205ENST00000538545 IL17DQ8TAD2 202 aa10.12□□□□□ -0.79
ACTN1-205ENST00000538545 A0A087WX48 190 aa10.11□□□□□ -0.79
ACTN1-205ENST00000538545 C9orf66Q5T8R8 295 aa10.11□□□□□ -0.79
ACTN1-205ENST00000538545 SPXQ9BT56 116 aa10.11□□□□□ -0.79
ACTN1-205ENST00000538545 TNFRSF18Q9Y5U5 241 aa10.11□□□□□ -0.79
ACTN1-205ENST00000538545 RRN3P1Q2M238 152 aa10.11□□□□□ -0.79
ACTN1-205ENST00000538545 ERASQ7Z444 233 aa10.11□□□□□ -0.79
ACTN1-205ENST00000538545 LINC00467Q9BRT7 94 aa10.11□□□□□ -0.79
ACTN1-205ENST00000538545 ZMAT4Q9H898 229 aa10.11□□□□□ -0.79
ACTN1-205ENST00000538545 LOC100131303A0A0U1RQF7 123 aa10.11□□□□□ -0.79
ACTN1-205ENST00000538545 IGIPA6NJ69 53 aa10.11□□□□□ -0.79
ACTN1-205ENST00000538545 RS1O15537 224 aa10.11□□□□□ -0.79
ACTN1-205ENST00000538545 DPM2O94777 84 aa10.11□□□□□ -0.79
ACTN1-205ENST00000538545 MPV17L2Q567V2 206 aa10.11□□□□□ -0.79
ACTN1-205ENST00000538545 I3L3M4 83 aa10.1□□□□□ -0.79
ACTN1-205ENST00000538545 FGF6P10767 208 aa10.1□□□□□ -0.79
ACTN1-205ENST00000538545 PRIMA1Q86XR5 153 aa10.1□□□□□ -0.79
ACTN1-205ENST00000538545 FAM110AQ9BQ89 295 aa10.1□□□□□ -0.79
ACTN1-205ENST00000538545 CHTOPQ9Y3Y2 248 aaKnown RBP10.1□□□□□ -0.79
ACTN1-205ENST00000538545 CMYA5Q8N3K9 4069 aa10.1□□□□□ -0.79
ACTN1-205ENST00000538545 COX8AP10176 69 aa10.1□□□□□ -0.79
ACTN1-205ENST00000538545 DEFB135Q30KP9 77 aa10.1□□□□□ -0.79
ACTN1-205ENST00000538545 ZNRF2Q8NHG8 242 aa10.1□□□□□ -0.79
ACTN1-205ENST00000538545 TRGV2A0A075B6R0 118 aa10.09□□□□□ -0.79
ACTN1-205ENST00000538545 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.09□□□□□ -0.79
ACTN1-205ENST00000538545 IGKV2-29A2NJV5 120 aaPredicted RBP10.09□□□□□ -0.79
ACTN1-205ENST00000538545 CMC4P56277 68 aaPredicted RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 871 ms