RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 NPC2P61916 151 aa5.19□□□□□ -1.58
MSH6-209ENST00000538136 HIGD2BQ4VC39 106 aa5.19□□□□□ -1.58
MSH6-209ENST00000538136 TRBV25-1A0A075B6N4 114 aa5.19□□□□□ -1.58
MSH6-209ENST00000538136 ADCYAP1P18509 176 aa5.19□□□□□ -1.58
MSH6-209ENST00000538136 BATFQ16520 125 aa5.19□□□□□ -1.58
MSH6-209ENST00000538136 Q8N3U1 123 aa5.19□□□□□ -1.58
MSH6-209ENST00000538136 GTSF1Q8WW33 167 aa5.19□□□□□ -1.58
MSH6-209ENST00000538136 SPXQ9BT56 116 aa5.19□□□□□ -1.58
MSH6-209ENST00000538136 OSTCQ9NRP0 149 aa5.19□□□□□ -1.58
MSH6-209ENST00000538136 TRAV1-1A0A0B4J248 108 aa5.18□□□□□ -1.58
MSH6-209ENST00000538136 MRPS12O15235 138 aaKnown RBP5.18□□□□□ -1.58
MSH6-209ENST00000538136 SUMO4Q6EEV6 95 aa5.18□□□□□ -1.58
MSH6-209ENST00000538136 RASL11AQ6T310 242 aa5.18□□□□□ -1.58
MSH6-209ENST00000538136 VCX2Q9H322 139 aa5.18□□□□□ -1.58
MSH6-209ENST00000538136 A0A087X0K7 114 aa5.18□□□□□ -1.58
MSH6-209ENST00000538136 IFITM10A6NMD0 228 aa5.18□□□□□ -1.58
MSH6-209ENST00000538136 IFI27P40305 119 aaPredicted RBP5.18□□□□□ -1.58
MSH6-209ENST00000538136 RPL39P62891 51 aaKnown RBP5.18□□□□□ -1.58
MSH6-209ENST00000538136 UQCC3Q6UW78 93 aa5.18□□□□□ -1.58
MSH6-209ENST00000538136 AP5S1Q9NUS5 200 aa5.18□□□□□ -1.58
MSH6-209ENST00000538136 NXPH4O95158 308 aa5.18□□□□□ -1.58
MSH6-209ENST00000538136 CRYGDP07320 174 aa5.18□□□□□ -1.58
MSH6-209ENST00000538136 C1orf43Q9BWL3 253 aa5.18□□□□□ -1.58
MSH6-209ENST00000538136 NPYP01303 97 aa5.18□□□□□ -1.58
MSH6-209ENST00000538136 CXCL1P09341 107 aa5.18□□□□□ -1.58
MSH6-209ENST00000538136 IL17DQ8TAD2 202 aa5.18□□□□□ -1.58
MSH6-209ENST00000538136 LRCOL1A6NCL2 159 aa5.17□□□□□ -1.58
MSH6-209ENST00000538136 SOCS3O14543 225 aa5.17□□□□□ -1.58
MSH6-209ENST00000538136 K7EQD1 137 aa5.17□□□□□ -1.58
MSH6-209ENST00000538136 TNFRSF6BO95407 300 aa5.17□□□□□ -1.58
MSH6-209ENST00000538136 MRPL51Q4U2R6 128 aaKnown RBP5.17□□□□□ -1.58
MSH6-209ENST00000538136 LINC00269Q8N2A0 174 aa5.17□□□□□ -1.58
MSH6-209ENST00000538136 LINC00469Q8N7U9 141 aa5.17□□□□□ -1.58
MSH6-209ENST00000538136 TMEM243Q9BU79 118 aa5.17□□□□□ -1.58
MSH6-209ENST00000538136 X6R8D5 127 aa5.17□□□□□ -1.58
MSH6-209ENST00000538136 RNASE3P12724 160 aaKnown RBP5.17□□□□□ -1.58
MSH6-209ENST00000538136 RHODO00212 210 aa5.16□□□□□ -1.58
MSH6-209ENST00000538136 Q6ZSN1 163 aa5.16□□□□□ -1.58
MSH6-209ENST00000538136 WFDC10BQ8IUB3 73 aa5.16□□□□□ -1.58
MSH6-209ENST00000538136 DNHD1Q96M86 4753 aa5.16□□□□□ -1.58
MSH6-209ENST00000538136 IGLV2-11P01706 119 aa5.16□□□□□ -1.58
MSH6-209ENST00000538136 MEIG1Q5JSS6 88 aa5.16□□□□□ -1.58
MSH6-209ENST00000538136 TP53TG1Q9Y2A0 90 aa5.16□□□□□ -1.58
MSH6-209ENST00000538136 ANK3Q12955 4377 aaKnown RBP5.16□□□□□ -1.58
MSH6-209ENST00000538136 TRAV9-2A0A087WT02 112 aa5.16□□□□□ -1.58
MSH6-209ENST00000538136 NHLRC4P0CG21 123 aaPredicted RBP5.16□□□□□ -1.58
MSH6-209ENST00000538136 CFAP126Q5VTH2 177 aa5.16□□□□□ -1.58
MSH6-209ENST00000538136 TMEM191AQ9H0A3 160 aa5.16□□□□□ -1.58
MSH6-209ENST00000538136 C19orf73Q9NVV2 129 aa5.16□□□□□ -1.58
MSH6-209ENST00000538136 LY96Q9Y6Y9 160 aa5.16□□□□□ -1.58
MSH6-209ENST00000538136 V9GYV3 84 aa5.16□□□□□ -1.58
MSH6-209ENST00000538136 TRBV7-3A0A075B6L6 115 aa5.15□□□□□ -1.58
MSH6-209ENST00000538136 SIVA1O15304 175 aa5.15□□□□□ -1.58
MSH6-209ENST00000538136 NMUP48645 174 aa5.15□□□□□ -1.58
MSH6-209ENST00000538136 SNRPEP62304 92 aaKnown RBP5.15□□□□□ -1.58
MSH6-209ENST00000538136 CACNG7P62955 275 aa5.15□□□□□ -1.58
MSH6-209ENST00000538136 AKAP9Q99996 3911 aa5.15□□□□□ -1.58
MSH6-209ENST00000538136 PPP1R17O96001 155 aa5.15□□□□□ -1.58
MSH6-209ENST00000538136 PFN2P35080 140 aa5.15□□□□□ -1.58
MSH6-209ENST00000538136 NIT2Q9NQR4 276 aa5.15□□□□□ -1.58
MSH6-209ENST00000538136 hDV102S1A0JD36 115 aa5.15□□□□□ -1.59
MSH6-209ENST00000538136 RBAKDNA6NC62 111 aa5.15□□□□□ -1.59
MSH6-209ENST00000538136 LINC00862A6NCI5 91 aa5.15□□□□□ -1.59
MSH6-209ENST00000538136 LYRM9A8MSI8 78 aa5.15□□□□□ -1.59
MSH6-209ENST00000538136 HSBP1L1C9JCN9 74 aa5.15□□□□□ -1.59
MSH6-209ENST00000538136 KLLNB2CW77 178 aa5.14□□□□□ -1.59
MSH6-209ENST00000538136 H7C2G1 150 aa5.14□□□□□ -1.59
MSH6-209ENST00000538136 SCGB1D4Q6XE38 83 aa5.14□□□□□ -1.59
MSH6-209ENST00000538136 TMEM18Q96B42 140 aa5.14□□□□□ -1.59
MSH6-209ENST00000538136 Q9H8V8 135 aa5.14□□□□□ -1.59
MSH6-209ENST00000538136 SMIM9A6NGZ8 99 aa5.14□□□□□ -1.59
MSH6-209ENST00000538136 ZNF561-AS1K7EIQ3 104 aa5.14□□□□□ -1.59
MSH6-209ENST00000538136 LEPROTL1O95214 131 aa5.14□□□□□ -1.59
MSH6-209ENST00000538136 HOXA5P20719 270 aa5.14□□□□□ -1.59
MSH6-209ENST00000538136 GAGE2EQ4V326 116 aa5.14□□□□□ -1.59
MSH6-209ENST00000538136 C6orf226Q5I0X4 101 aa5.14□□□□□ -1.59
MSH6-209ENST00000538136 LYPD6BQ8NI32 183 aa5.14□□□□□ -1.59
MSH6-209ENST00000538136 RNASE8Q8TDE3 154 aaKnown RBP5.14□□□□□ -1.59
MSH6-209ENST00000538136 DNAJC30Q96LL9 226 aa5.14□□□□□ -1.59
MSH6-209ENST00000538136 GAGE2DQ9UEU5 116 aa5.14□□□□□ -1.59
MSH6-209ENST00000538136 NUPR2A6NF83 97 aa5.14□□□□□ -1.59
MSH6-209ENST00000538136 VCYO14598 125 aa5.14□□□□□ -1.59
MSH6-209ENST00000538136 ATP5LO75964 103 aa5.14□□□□□ -1.59
MSH6-209ENST00000538136 CFAP161Q6P656 301 aa5.14□□□□□ -1.59
MSH6-209ENST00000538136 CYSLTR1Q9Y271 337 aa5.14□□□□□ -1.59
MSH6-209ENST00000538136 LENEPQ9Y5L5 61 aa5.14□□□□□ -1.59
MSH6-209ENST00000538136 GIG44P09565 113 aaPredicted RBP5.13□□□□□ -1.59
MSH6-209ENST00000538136 IGLV2-8P01709 118 aa5.13□□□□□ -1.59
MSH6-209ENST00000538136 FAM104BQ5XKR9 115 aa5.13□□□□□ -1.59
MSH6-209ENST00000538136 Q8NAQ8 132 aa5.13□□□□□ -1.59
MSH6-209ENST00000538136 GATD1Q8NB37 220 aa5.13□□□□□ -1.59
MSH6-209ENST00000538136 OR10D4PQ8NGN7 298 aa5.13□□□□□ -1.59
MSH6-209ENST00000538136 BAALCQ8WXS3 180 aa5.13□□□□□ -1.59
MSH6-209ENST00000538136 PRSS29PA6NIE9 313 aa5.13□□□□□ -1.59
MSH6-209ENST00000538136 EREGO14944 169 aa5.13□□□□□ -1.59
MSH6-209ENST00000538136 TMEM70Q9BUB7 260 aa5.13□□□□□ -1.59
MSH6-209ENST00000538136 MEGF8Q7Z7M0 2845 aa5.13□□□□□ -1.59
MSH6-209ENST00000538136 GAGE2BQ13066 116 aa5.13□□□□□ -1.59
MSH6-209ENST00000538136 Q6AWC8 147 aa5.13□□□□□ -1.59
MSH6-209ENST00000538136 C11orf52Q96A22 123 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms