RNA–Protein interactions for RNA: ENST00000537230.2

TRIM25-202, Transcript of tripartite motif containing 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM25, Length 2,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-202ENST00000537230 MRPL16Q9NX20 251 aaKnown RBP9.57□□□□□ -0.88
TRIM25-202ENST00000537230 LINC00315P59091 139 aa9.56□□□□□ -0.88
TRIM25-202ENST00000537230 SPATA25Q9BR10 227 aa9.56□□□□□ -0.88
TRIM25-202ENST00000537230 SS18L2Q9UHA2 77 aa9.56□□□□□ -0.88
TRIM25-202ENST00000537230 SETXQ7Z333 2677 aaKnown RBP9.56□□□□□ -0.88
TRIM25-202ENST00000537230 LINC01549A6NIU2 74 aa9.56□□□□□ -0.88
TRIM25-202ENST00000537230 CD7P09564 240 aa9.56□□□□□ -0.88
TRIM25-202ENST00000537230 HOXD3P31249 432 aaPredicted RBP9.56□□□□□ -0.88
TRIM25-202ENST00000537230 ID1P41134 155 aa9.56□□□□□ -0.88
TRIM25-202ENST00000537230 C20orf78Q9BR46 151 aa9.56□□□□□ -0.88
TRIM25-202ENST00000537230 KIF25-AS1Q9Y6Z4 181 aa9.56□□□□□ -0.88
TRIM25-202ENST00000537230 A0A087WWL8 130 aa9.55□□□□□ -0.88
TRIM25-202ENST00000537230 DUSP14O95147 198 aaKnown RBP9.55□□□□□ -0.88
TRIM25-202ENST00000537230 FAM159AQ6UWV7 190 aa9.55□□□□□ -0.88
TRIM25-202ENST00000537230 TRBV7-9A0A0J9YWB2 115 aa9.55□□□□□ -0.88
TRIM25-202ENST00000537230 LINC01619G3V211 115 aa9.55□□□□□ -0.88
TRIM25-202ENST00000537230 SRSF9Q13242 221 aaKnown RBP eCLIP9.55□□□□□ -0.88
TRIM25-202ENST00000537230 MDFICQ9P1T7 246 aa9.55□□□□□ -0.88
TRIM25-202ENST00000537230 PDZD2O15018 2839 aa9.55□□□□□ -0.88
TRIM25-202ENST00000537230 A0A0J9YX75 114 aa9.55□□□□□ -0.88
TRIM25-202ENST00000537230 LOC107984156A0A0G2JMH3 177 aa9.54□□□□□ -0.88
TRIM25-202ENST00000537230 K7EQG2 157 aa9.54□□□□□ -0.88
TRIM25-202ENST00000537230 CRYGDP07320 174 aa9.54□□□□□ -0.88
TRIM25-202ENST00000537230 SMCPP49901 116 aaPredicted RBP9.54□□□□□ -0.88
TRIM25-202ENST00000537230 SPINK13Q1W4C9 94 aa9.54□□□□□ -0.88
TRIM25-202ENST00000537230 ARL17AQ8IVW1 177 aa9.54□□□□□ -0.88
TRIM25-202ENST00000537230 DUX3Q96PT4 197 aa9.54□□□□□ -0.88
TRIM25-202ENST00000537230 NXPH4O95158 308 aa9.54□□□□□ -0.88
TRIM25-202ENST00000537230 APOMO95445 188 aa9.54□□□□□ -0.88
TRIM25-202ENST00000537230 MED14OSP0DP75 135 aa9.54□□□□□ -0.88
TRIM25-202ENST00000537230 HERV-K104P63124 156 aa9.54□□□□□ -0.88
TRIM25-202ENST00000537230 ZFP2Q6ZN57 461 aa9.54□□□□□ -0.88
TRIM25-202ENST00000537230 C11orf86A6NJI1 115 aa9.53□□□□□ -0.88
TRIM25-202ENST00000537230 SLURP1P55000 103 aa9.53□□□□□ -0.88
TRIM25-202ENST00000537230 Q96MF0 132 aa9.53□□□□□ -0.88
TRIM25-202ENST00000537230 TMEM89A2RUT3 159 aa9.52□□□□□ -0.88
TRIM25-202ENST00000537230 TSHBP01222 138 aa9.52□□□□□ -0.88
TRIM25-202ENST00000537230 DEFB113Q30KQ7 82 aa9.52□□□□□ -0.88
TRIM25-202ENST00000537230 PSMB2P49721 201 aa9.52□□□□□ -0.89
TRIM25-202ENST00000537230 SNRPD3P62318 126 aaKnown RBP9.52□□□□□ -0.89
TRIM25-202ENST00000537230 CFAP126Q5VTH2 177 aa9.52□□□□□ -0.89
TRIM25-202ENST00000537230 Q8N1Y9 231 aa9.52□□□□□ -0.89
TRIM25-202ENST00000537230 PTH2Q96A98 100 aa9.52□□□□□ -0.89
TRIM25-202ENST00000537230 ELANEP08246 267 aa9.52□□□□□ -0.89
TRIM25-202ENST00000537230 UBE2D1P51668 147 aa9.52□□□□□ -0.89
TRIM25-202ENST00000537230 RPL39P62891 51 aaKnown RBP9.52□□□□□ -0.89
TRIM25-202ENST00000537230 FAM74A4Q5TZK3 123 aa9.52□□□□□ -0.89
TRIM25-202ENST00000537230 SUMO4Q6EEV6 95 aa9.52□□□□□ -0.89
TRIM25-202ENST00000537230 ZNF418Q8TF45 676 aaPredicted RBP9.52□□□□□ -0.89
TRIM25-202ENST00000537230 UBE2E2Q96LR5 201 aa9.52□□□□□ -0.89
TRIM25-202ENST00000537230 TP53TG1Q9Y2A0 90 aa9.52□□□□□ -0.89
TRIM25-202ENST00000537230 IGLV4-69A0A075B6H9 119 aa9.51□□□□□ -0.89
TRIM25-202ENST00000537230 FOXI1Q12951 378 aa9.51□□□□□ -0.89
TRIM25-202ENST00000537230 NFE4Q86UQ8 179 aa9.51□□□□□ -0.89
TRIM25-202ENST00000537230 KRTAP1-3Q8IUG1 177 aa9.51□□□□□ -0.89
TRIM25-202ENST00000537230 DLX4Q92988 240 aaPredicted RBP9.51□□□□□ -0.89
TRIM25-202ENST00000537230 IGHV3-16A0A0C4DH30 117 aa9.51□□□□□ -0.89
TRIM25-202ENST00000537230 PRM2P04554 102 aa9.51□□□□□ -0.89
TRIM25-202ENST00000537230 HIST2H2BCQ6DN03 193 aa9.5□□□□□ -0.89
TRIM25-202ENST00000537230 SYT8Q8NBV8 401 aa9.5□□□□□ -0.89
TRIM25-202ENST00000537230 UNC79Q9P2D8 2635 aa9.5□□□□□ -0.89
TRIM25-202ENST00000537230 F5H697 171 aa9.5□□□□□ -0.89
TRIM25-202ENST00000537230 RBMY1A1P0DJD3 496 aaKnown RBP9.5□□□□□ -0.89
TRIM25-202ENST00000537230 RBMY1CP0DJD4 496 aa9.5□□□□□ -0.89
TRIM25-202ENST00000537230 RBMY1FQ15415 496 aaKnown RBP9.5□□□□□ -0.89
TRIM25-202ENST00000537230 POM121L12Q8N7R1 296 aa9.5□□□□□ -0.89
TRIM25-202ENST00000537230 C1QTNF4Q9BXJ3 329 aa9.5□□□□□ -0.89
TRIM25-202ENST00000537230 A0A0J9YY99 117 aa9.49□□□□□ -0.89
TRIM25-202ENST00000537230 LGALS9O00182 355 aa9.49□□□□□ -0.89
TRIM25-202ENST00000537230 TSPEAR-AS2P59090 65 aa9.49□□□□□ -0.89
TRIM25-202ENST00000537230 KNCNA6PVL3 124 aa9.49□□□□□ -0.89
TRIM25-202ENST00000537230 FAM110AQ9BQ89 295 aa9.49□□□□□ -0.89
TRIM25-202ENST00000537230 IGIPA6NJ69 53 aa9.49□□□□□ -0.89
TRIM25-202ENST00000537230 FHL3Q13643 280 aa9.49□□□□□ -0.89
TRIM25-202ENST00000537230 RNF152Q8N8N0 203 aa9.49□□□□□ -0.89
TRIM25-202ENST00000537230 C9orf85Q96MD7 179 aa9.49□□□□□ -0.89
TRIM25-202ENST00000537230 NDUFA11Q86Y39 141 aa9.48□□□□□ -0.89
TRIM25-202ENST00000537230 RNF183Q96D59 192 aa9.48□□□□□ -0.89
TRIM25-202ENST00000537230 C2CD3Q4AC94 2353 aa9.48□□□□□ -0.89
TRIM25-202ENST00000537230 HTN1P15515 57 aa9.48□□□□□ -0.89
TRIM25-202ENST00000537230 POLR2KP53803 58 aaKnown RBP9.48□□□□□ -0.89
TRIM25-202ENST00000537230 UBE2D3P61077 147 aa9.48□□□□□ -0.89
TRIM25-202ENST00000537230 UBE2D2P62837 147 aa9.48□□□□□ -0.89
TRIM25-202ENST00000537230 TMEM170BQ5T4T1 132 aa9.48□□□□□ -0.89
TRIM25-202ENST00000537230 CDIP1Q9H305 208 aa9.48□□□□□ -0.89
TRIM25-202ENST00000537230 ODF3Q96PU9 254 aa9.47□□□□□ -0.89
TRIM25-202ENST00000537230 NACAE9PAV3 2078 aa9.47□□□□□ -0.89
TRIM25-202ENST00000537230 IGHV1OR15-1A0A075B7D0 117 aa9.47□□□□□ -0.89
TRIM25-202ENST00000537230 PMVKQ15126 192 aa9.47□□□□□ -0.89
TRIM25-202ENST00000537230 KHDC1LQ5JSQ8 128 aa9.47□□□□□ -0.89
TRIM25-202ENST00000537230 ZNRF2Q8NHG8 242 aa9.47□□□□□ -0.89
TRIM25-202ENST00000537230 ANK3Q12955 4377 aaKnown RBP9.47□□□□□ -0.89
TRIM25-202ENST00000537230 SDHAF1A6NFY7 115 aa9.46□□□□□ -0.89
TRIM25-202ENST00000537230 TCL1BO95988 128 aa9.46□□□□□ -0.89
TRIM25-202ENST00000537230 PPP1R17O96001 155 aa9.46□□□□□ -0.89
TRIM25-202ENST00000537230 HERVK_113P61574 105 aa9.46□□□□□ -0.89
TRIM25-202ENST00000537230 WFDC11Q8NEX6 87 aa9.46□□□□□ -0.89
TRIM25-202ENST00000537230 CFC1BP0CG36 223 aa9.46□□□□□ -0.9
TRIM25-202ENST00000537230 CFC1P0CG37 223 aa9.46□□□□□ -0.9
TRIM25-202ENST00000537230 DEFB131AP59861 70 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms