RNA–Protein interactions for RNA: ENST00000536843.5

CHFR-213, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,424 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-213ENST00000536843 VCYO14598 125 aa11.67□□□□□ -0.54
CHFR-213ENST00000536843 NXPH4O95158 308 aa11.67□□□□□ -0.54
CHFR-213ENST00000536843 LINC00315P59091 139 aa11.67□□□□□ -0.54
CHFR-213ENST00000536843 KIF25-AS1Q9Y6Z4 181 aa11.67□□□□□ -0.54
CHFR-213ENST00000536843 IGF1P05019 195 aa11.67□□□□□ -0.54
CHFR-213ENST00000536843 Q8N9W7 124 aa11.67□□□□□ -0.54
CHFR-213ENST00000536843 DUX3Q96PT4 197 aa11.67□□□□□ -0.54
CHFR-213ENST00000536843 USP24Q9UPU5 2620 aa11.67□□□□□ -0.54
CHFR-213ENST00000536843 FAM236AA0A1B0GUQ0 79 aa11.66□□□□□ -0.54
CHFR-213ENST00000536843 FAM236BA0A1B0GV22 79 aa11.66□□□□□ -0.54
CHFR-213ENST00000536843 C19orf84I3L1E1 186 aa11.66□□□□□ -0.54
CHFR-213ENST00000536843 IGHV1-69P01742 117 aa11.66□□□□□ -0.54
CHFR-213ENST00000536843 METTL26Q96S19 204 aa11.66□□□□□ -0.54
CHFR-213ENST00000536843 NDUFA7O95182 113 aa11.66□□□□□ -0.54
CHFR-213ENST00000536843 LINC00694P0DN24 101 aa11.66□□□□□ -0.54
CHFR-213ENST00000536843 ITLN2Q8WWU7 325 aaPredicted RBP11.66□□□□□ -0.54
CHFR-213ENST00000536843 IGHV3OR16-13A0A075B7E8 117 aa11.65□□□□□ -0.54
CHFR-213ENST00000536843 IGHV3-74A0A0B4J1X5 117 aa11.65□□□□□ -0.54
CHFR-213ENST00000536843 COX6CP09669 75 aa11.65□□□□□ -0.54
CHFR-213ENST00000536843 KLK9Q2XQG4 91 aa11.65□□□□□ -0.54
CHFR-213ENST00000536843 C15orf32Q32M92 178 aa11.65□□□□□ -0.54
CHFR-213ENST00000536843 C5orf47Q569G3 176 aa11.65□□□□□ -0.54
CHFR-213ENST00000536843 C3orf22Q8N5N4 141 aa11.65□□□□□ -0.54
CHFR-213ENST00000536843 LINC00477Q96M19 166 aa11.65□□□□□ -0.54
CHFR-213ENST00000536843 KLK9Q9UKQ9 250 aa11.65□□□□□ -0.54
CHFR-213ENST00000536843 IGSF10Q6WRI0 2623 aa11.65□□□□□ -0.54
CHFR-213ENST00000536843 TRGV11A0A075B6L2 103 aa11.65□□□□□ -0.55
CHFR-213ENST00000536843 A0A0J9YXY3 114 aa11.65□□□□□ -0.55
CHFR-213ENST00000536843 LST1O00453 97 aa11.65□□□□□ -0.55
CHFR-213ENST00000536843 RNASE3P12724 160 aaKnown RBP11.65□□□□□ -0.55
CHFR-213ENST00000536843 ZNF22P17026 224 aaPredicted RBP11.65□□□□□ -0.55
CHFR-213ENST00000536843 UBE2E1P51965 193 aa11.65□□□□□ -0.55
CHFR-213ENST00000536843 LMO4P61968 165 aa11.65□□□□□ -0.55
CHFR-213ENST00000536843 U3KQE9 123 aa11.65□□□□□ -0.55
CHFR-213ENST00000536843 ACYP1P07311 99 aa11.64□□□□□ -0.55
CHFR-213ENST00000536843 BPESC1Q9GZL8 116 aa11.64□□□□□ -0.55
CHFR-213ENST00000536843 TRBV27A0A0K0K1C4 114 aa11.64□□□□□ -0.55
CHFR-213ENST00000536843 C9orf153Q5TBE3 101 aa11.64□□□□□ -0.55
CHFR-213ENST00000536843 C9orf139Q6ZV77 190 aa11.64□□□□□ -0.55
CHFR-213ENST00000536843 LITAFQ99732 161 aa11.64□□□□□ -0.55
CHFR-213ENST00000536843 J3KRW8 73 aa11.63□□□□□ -0.55
CHFR-213ENST00000536843 SAA4P35542 130 aa11.63□□□□□ -0.55
CHFR-213ENST00000536843 FAM110DQ8TAY7 271 aaPredicted RBP11.63□□□□□ -0.55
CHFR-213ENST00000536843 C16orf92Q96LL3 132 aa11.63□□□□□ -0.55
CHFR-213ENST00000536843 UQCRQO14949 82 aa11.62□□□□□ -0.55
CHFR-213ENST00000536843 LRRC75A-AS1Q8N1F1 130 aa11.62□□□□□ -0.55
CHFR-213ENST00000536843 C20orf173Q96LM9 149 aa11.62□□□□□ -0.55
CHFR-213ENST00000536843 CACNA1BQ00975 2339 aa11.62□□□□□ -0.55
CHFR-213ENST00000536843 AKAP6Q13023 2319 aa11.62□□□□□ -0.55
CHFR-213ENST00000536843 ECSCRQ19T08 205 aa11.62□□□□□ -0.55
CHFR-213ENST00000536843 SUMO4Q6EEV6 95 aa11.62□□□□□ -0.55
CHFR-213ENST00000536843 IGHV3-49A0A0A0MS15 119 aa11.61□□□□□ -0.55
CHFR-213ENST00000536843 ATP5G1P05496 136 aa11.61□□□□□ -0.55
CHFR-213ENST00000536843 LINC00526Q96FQ7 95 aa11.61□□□□□ -0.55
CHFR-213ENST00000536843 CCDC140Q96MF4 163 aa11.61□□□□□ -0.55
CHFR-213ENST00000536843 TRBV6-5A0A0K0K1A5 114 aa11.61□□□□□ -0.55
CHFR-213ENST00000536843 A0A1B0GX51 115 aa11.61□□□□□ -0.55
CHFR-213ENST00000536843 APRG1Q8IVJ8 170 aa11.61□□□□□ -0.55
CHFR-213ENST00000536843 SPANXCQ9NY87 97 aa11.61□□□□□ -0.55
CHFR-213ENST00000536843 NPFFO15130 113 aa11.6□□□□□ -0.55
CHFR-213ENST00000536843 ATP6V0E1O15342 81 aa11.6□□□□□ -0.55
CHFR-213ENST00000536843 GNRH2O43555 120 aa11.6□□□□□ -0.55
CHFR-213ENST00000536843 NSUN5P1Q3KNT7 163 aa11.6□□□□□ -0.55
CHFR-213ENST00000536843 DEFB104AQ8WTQ1 72 aa11.6□□□□□ -0.55
CHFR-213ENST00000536843 CLEC2BQ92478 149 aa11.6□□□□□ -0.55
CHFR-213ENST00000536843 FAM19A4Q96LR4 140 aa11.6□□□□□ -0.55
CHFR-213ENST00000536843 IGHV3-64A0A075B6Q5 118 aa11.6□□□□□ -0.55
CHFR-213ENST00000536843 CEMP1Q6PRD7 247 aaPredicted RBP11.6□□□□□ -0.55
CHFR-213ENST00000536843 J3KT08 172 aa11.59□□□□□ -0.55
CHFR-213ENST00000536843 ATP5J2P56134 94 aa11.59□□□□□ -0.55
CHFR-213ENST00000536843 HERVK_113P63121 156 aa11.59□□□□□ -0.55
CHFR-213ENST00000536843 RHOHQ15669 191 aa11.59□□□□□ -0.55
CHFR-213ENST00000536843 CLEC19AQ6UXS0 136 aa11.59□□□□□ -0.55
CHFR-213ENST00000536843 CFAP46Q8IYW2 2715 aa11.59□□□□□ -0.55
CHFR-213ENST00000536843 OVOL1O14753 267 aa11.59□□□□□ -0.55
CHFR-213ENST00000536843 G3V318 75 aa11.58□□□□□ -0.56
CHFR-213ENST00000536843 OPRPNQ99935 248 aaPredicted RBP11.58□□□□□ -0.56
CHFR-213ENST00000536843 SMIM9A6NGZ8 99 aa11.58□□□□□ -0.56
CHFR-213ENST00000536843 LINC00643Q86TS7 51 aa11.58□□□□□ -0.56
CHFR-213ENST00000536843 LOC107984640A0A0U1RRK4 108 aa11.57□□□□□ -0.56
CHFR-213ENST00000536843 I3L3M4 83 aa11.57□□□□□ -0.56
CHFR-213ENST00000536843 IGHV3-30-3P0DP02 117 aa11.57□□□□□ -0.56
CHFR-213ENST00000536843 RNASE4P34096 147 aaKnown RBP11.57□□□□□ -0.56
CHFR-213ENST00000536843 BBC3Q96PG8 261 aaPredicted RBP11.57□□□□□ -0.56
CHFR-213ENST00000536843 ZNF580Q9UK33 172 aa11.57□□□□□ -0.56
CHFR-213ENST00000536843 ZNF256Q9Y2P7 627 aaPredicted RBP11.57□□□□□ -0.56
CHFR-213ENST00000536843 IGHV3OR16-10A0A075B7F0 116 aa11.57□□□□□ -0.56
CHFR-213ENST00000536843 SPTAN1Q13813 2472 aaKnown RBP11.57□□□□□ -0.56
CHFR-213ENST00000536843 A0A0J9YXV3 536 aa11.56□□□□□ -0.56
CHFR-213ENST00000536843 PRSS2P07478 247 aa11.56□□□□□ -0.56
CHFR-213ENST00000536843 MIAQ16674 131 aa11.56□□□□□ -0.56
CHFR-213ENST00000536843 SDIM1Q6ZPB5 146 aa11.56□□□□□ -0.56
CHFR-213ENST00000536843 EEF1AKMT3Q96AZ1 226 aa11.56□□□□□ -0.56
CHFR-213ENST00000536843 ADAMTSL4-AS1Q5T5F5 129 aa11.56□□□□□ -0.56
CHFR-213ENST00000536843 TMEM61Q8N0U2 210 aa11.56□□□□□ -0.56
CHFR-213ENST00000536843 SMCR5Q8TEV8 140 aa11.56□□□□□ -0.56
CHFR-213ENST00000536843 DCANP1Q8TF63 244 aa11.56□□□□□ -0.56
CHFR-213ENST00000536843 JPT2Q9H910 190 aa11.56□□□□□ -0.56
CHFR-213ENST00000536843 TRBV7-1A0A0A6YYK4 115 aa11.55□□□□□ -0.56
CHFR-213ENST00000536843 LINC00527Q9UJ94 153 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms