RNA–Protein interactions for RNA: ENST00000536742.5

CCDC60-203, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC60, Length 886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-203ENST00000536742 UBE2L3P68036 154 aaKnown RBP3.96□□□□□ -1.78
CCDC60-203ENST00000536742 PDE6HQ13956 83 aa3.96□□□□□ -1.78
CCDC60-203ENST00000536742 C9orf129Q5T035 196 aaKnown RBP3.96□□□□□ -1.78
CCDC60-203ENST00000536742 C14orf178Q8N769 122 aaPredicted RBP3.96□□□□□ -1.78
CCDC60-203ENST00000536742 OR10J6PQ8NGY7 276 aa3.96□□□□□ -1.78
CCDC60-203ENST00000536742 RPUSD4Q96CM3 377 aaKnown RBP3.96□□□□□ -1.78
CCDC60-203ENST00000536742 FAM210AQ96ND0 272 aa3.96□□□□□ -1.78
CCDC60-203ENST00000536742 LINC00467Q9BRT7 94 aa3.96□□□□□ -1.78
CCDC60-203ENST00000536742 TCEAL7Q9BRU2 100 aa3.96□□□□□ -1.78
CCDC60-203ENST00000536742 PRELID1Q9Y255 219 aa3.96□□□□□ -1.78
CCDC60-203ENST00000536742 ARL2-SNX15V9GYD0 113 aa3.96□□□□□ -1.78
CCDC60-203ENST00000536742 MACF1Q9UPN3 7388 aaKnown RBP3.96□□□□□ -1.78
CCDC60-203ENST00000536742 A0A096LPF7 62 aa3.95□□□□□ -1.78
CCDC60-203ENST00000536742 A0A1B0GV50 99 aa3.95□□□□□ -1.78
CCDC60-203ENST00000536742 A0A1W2PRE2 83 aa3.95□□□□□ -1.78
CCDC60-203ENST00000536742 H3BMM0 161 aa3.95□□□□□ -1.78
CCDC60-203ENST00000536742 H3BRN7 92 aa3.95□□□□□ -1.78
CCDC60-203ENST00000536742 PDE6DO43924 150 aa3.95□□□□□ -1.78
CCDC60-203ENST00000536742 NBEAP1P0C6P0 100 aa3.95□□□□□ -1.78
CCDC60-203ENST00000536742 ARL14EPLP0DKL9 152 aa3.95□□□□□ -1.78
CCDC60-203ENST00000536742 GCHFRP30047 84 aa3.95□□□□□ -1.78
CCDC60-203ENST00000536742 SNRPD3P62318 126 aaKnown RBP3.95□□□□□ -1.78
CCDC60-203ENST00000536742 GCSAMLQ5JQS6 135 aa3.95□□□□□ -1.78
CCDC60-203ENST00000536742 UQCC3Q6UW78 93 aa3.95□□□□□ -1.78
CCDC60-203ENST00000536742 MIR17HGQ75NE6 70 aa3.95□□□□□ -1.78
CCDC60-203ENST00000536742 SLC50A1Q9BRV3 221 aa3.95□□□□□ -1.78
CCDC60-203ENST00000536742 VSIRQ9H7M9 311 aa3.95□□□□□ -1.78
CCDC60-203ENST00000536742 MED9Q9NWA0 146 aa3.95□□□□□ -1.78
CCDC60-203ENST00000536742 GNG13Q9P2W3 67 aa3.95□□□□□ -1.78
CCDC60-203ENST00000536742 FCGBPQ9Y6R7 5405 aaPredicted RBP3.95□□□□□ -1.78
CCDC60-203ENST00000536742 IGHV3OR16-13A0A075B7E8 117 aa3.94□□□□□ -1.78
CCDC60-203ENST00000536742 IGHV3-74A0A0B4J1X5 117 aa3.94□□□□□ -1.78
CCDC60-203ENST00000536742 SERTM2A0A1B0GWG4 89 aa3.94□□□□□ -1.78
CCDC60-203ENST00000536742 NDUFS6O75380 124 aaKnown RBP3.94□□□□□ -1.78
CCDC60-203ENST00000536742 S100A9P06702 114 aaKnown RBP3.94□□□□□ -1.78
CCDC60-203ENST00000536742 NMBP08949 121 aa3.94□□□□□ -1.78
CCDC60-203ENST00000536742 TSPOP30536 169 aa3.94□□□□□ -1.78
CCDC60-203ENST00000536742 FGF8P55075 233 aaPredicted RBP3.94□□□□□ -1.78
CCDC60-203ENST00000536742 IFITM2Q01629 132 aa3.94□□□□□ -1.78
CCDC60-203ENST00000536742 PATE2Q6UY27 113 aa3.94□□□□□ -1.78
CCDC60-203ENST00000536742 ARL6IP6Q8N6S5 226 aa3.94□□□□□ -1.78
CCDC60-203ENST00000536742 LYPD6BQ8NI32 183 aa3.94□□□□□ -1.78
CCDC60-203ENST00000536742 BLNKQ8WV28 456 aa3.94□□□□□ -1.78
CCDC60-203ENST00000536742 PPDPFQ9H3Y8 114 aa3.94□□□□□ -1.78
CCDC60-203ENST00000536742 TREM1Q9NP99 234 aa3.94□□□□□ -1.78
CCDC60-203ENST00000536742 OTORQ9NRC9 128 aa3.94□□□□□ -1.78
CCDC60-203ENST00000536742 ANAPC11Q9NYG5 84 aa3.94□□□□□ -1.78
CCDC60-203ENST00000536742 TRAV26-2A0A0B4J265 109 aa3.93□□□□□ -1.78
CCDC60-203ENST00000536742 LINC00862A6NCI5 91 aa3.93□□□□□ -1.78
CCDC60-203ENST00000536742 PGPA6NDG6 321 aa3.93□□□□□ -1.78
CCDC60-203ENST00000536742 TMEM250H0YL14 139 aa3.93□□□□□ -1.78
CCDC60-203ENST00000536742 ISLRO14498 428 aa3.93□□□□□ -1.78
CCDC60-203ENST00000536742 SLC25A5P05141 298 aaKnown RBP3.93□□□□□ -1.78
CCDC60-203ENST00000536742 CRYGDP07320 174 aa3.93□□□□□ -1.78
CCDC60-203ENST00000536742 OR10J4P0C629 311 aa3.93□□□□□ -1.78
CCDC60-203ENST00000536742 BCL2P10415 239 aa3.93□□□□□ -1.78
CCDC60-203ENST00000536742 RANP62826 216 aaKnown RBP3.93□□□□□ -1.78
CCDC60-203ENST00000536742 MEF2BQ02080 365 aaPredicted RBP3.93□□□□□ -1.78
CCDC60-203ENST00000536742 FAM74A3Q4VXF1 159 aa3.93□□□□□ -1.78
CCDC60-203ENST00000536742 PSMG4Q5JS54 123 aa3.93□□□□□ -1.78
CCDC60-203ENST00000536742 COMMD7Q86VX2 200 aa3.93□□□□□ -1.78
CCDC60-203ENST00000536742 C1orf158Q8N1D5 194 aa3.93□□□□□ -1.78
CCDC60-203ENST00000536742 C5orf17Q8NAS9 161 aa3.93□□□□□ -1.78
CCDC60-203ENST00000536742 HIST1H2BAQ96A08 127 aa3.93□□□□□ -1.78
CCDC60-203ENST00000536742 FAM167A-AS1Q96KT0 104 aa3.93□□□□□ -1.78
CCDC60-203ENST00000536742 NDFIP1Q9BT67 221 aa3.93□□□□□ -1.78
CCDC60-203ENST00000536742 TMEM208Q9BTX3 173 aa3.93□□□□□ -1.78
CCDC60-203ENST00000536742 SLC25A2Q9BXI2 301 aa3.93□□□□□ -1.78
CCDC60-203ENST00000536742 SLC35B3Q9H1N7 401 aa3.93□□□□□ -1.78
CCDC60-203ENST00000536742 BIN3Q9NQY0 253 aa3.93□□□□□ -1.78
CCDC60-203ENST00000536742 TRBV19A0A075B6N1 114 aa3.92□□□□□ -1.78
CCDC60-203ENST00000536742 IGHV3-66A0A0C4DH42 116 aa3.92□□□□□ -1.78
CCDC60-203ENST00000536742 KRBOX1C9JBD0 128 aa3.92□□□□□ -1.78
CCDC60-203ENST00000536742 PYYP10082 97 aa3.92□□□□□ -1.78
CCDC60-203ENST00000536742 HLA-DRB4P13762 266 aa3.92□□□□□ -1.78
CCDC60-203ENST00000536742 UBE2G2P60604 165 aa3.92□□□□□ -1.78
CCDC60-203ENST00000536742 UBE2G1P62253 170 aa3.92□□□□□ -1.78
CCDC60-203ENST00000536742 ZNF726P1Q15940 193 aa3.92□□□□□ -1.78
CCDC60-203ENST00000536742 SPATA31B1PQ5VZV4 182 aa3.92□□□□□ -1.78
CCDC60-203ENST00000536742 EBLN2Q6P2I7 272 aa3.92□□□□□ -1.78
CCDC60-203ENST00000536742 EIF4E3Q8N5X7 224 aaKnown RBP3.92□□□□□ -1.78
CCDC60-203ENST00000536742 C15orf54Q8N8G6 183 aa3.92□□□□□ -1.78
CCDC60-203ENST00000536742 DCANP1Q8TF63 244 aa3.92□□□□□ -1.78
CCDC60-203ENST00000536742 HLA-DRB4X5D2U9 266 aa3.92□□□□□ -1.78
CCDC60-203ENST00000536742 FAM74A7A6NL05 159 aa3.91□□□□□ -1.78
CCDC60-203ENST00000536742 IGLC2P0DOY2 106 aa3.91□□□□□ -1.78
CCDC60-203ENST00000536742 S100A1P23297 94 aa3.91□□□□□ -1.78
CCDC60-203ENST00000536742 AKR1C3P42330 323 aa3.91□□□□□ -1.78
CCDC60-203ENST00000536742 CEBPGP53567 150 aa3.91□□□□□ -1.78
CCDC60-203ENST00000536742 FXYD7P58549 80 aa3.91□□□□□ -1.78
CCDC60-203ENST00000536742 TAS2R60P59551 318 aa3.91□□□□□ -1.78
CCDC60-203ENST00000536742 PSG3Q16557 428 aa3.91□□□□□ -1.78
CCDC60-203ENST00000536742 KRTAP6-3Q3LI67 103 aa3.91□□□□□ -1.78
CCDC60-203ENST00000536742 TMEM78Q5T7P6 136 aa3.91□□□□□ -1.78
CCDC60-203ENST00000536742 SPINK6Q6UWN8 80 aa3.91□□□□□ -1.78
CCDC60-203ENST00000536742 ZNF738Q8NE65 137 aa3.91□□□□□ -1.78
CCDC60-203ENST00000536742 FXYD5Q96DB9 178 aa3.91□□□□□ -1.78
CCDC60-203ENST00000536742 LINC00052Q96N35 136 aa3.91□□□□□ -1.78
CCDC60-203ENST00000536742 EPDR1Q9UM22 224 aa3.91□□□□□ -1.78
CCDC60-203ENST00000536742 USH2AO75445 5202 aa3.9□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms