RNA–Protein interactions for RNA: ENST00000536344.5

TRIM3-214, Transcript of tripartite motif containing 3, humanhuman

TSL 2 BASIC

Gene TRIM3, Length 2,704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-214ENST00000536344 SCGB3A1Q96QR1 104 aa16.07■□□□□ 0.16
TRIM3-214ENST00000536344 LINC01619G3V211 115 aa16.07■□□□□ 0.16
TRIM3-214ENST00000536344 FLNBO75369 2602 aaKnown RBP16.06■□□□□ 0.16
TRIM3-214ENST00000536344 PSMB8P28062 276 aa16.06■□□□□ 0.16
TRIM3-214ENST00000536344 ZNF702PQ9H963 129 aa16.06■□□□□ 0.16
TRIM3-214ENST00000536344 ANK3Q12955 4377 aaKnown RBP16.06■□□□□ 0.16
TRIM3-214ENST00000536344 TRAV8-2A0A0B4J237 113 aa16.05■□□□□ 0.16
TRIM3-214ENST00000536344 NEXN-AS1Q8NBZ9 246 aa16.05■□□□□ 0.16
TRIM3-214ENST00000536344 C18orf65Q6ZTR6 163 aa16.05■□□□□ 0.16
TRIM3-214ENST00000536344 TRPT1Q86TN4 253 aaKnown RBP16.05■□□□□ 0.16
TRIM3-214ENST00000536344 HIVEP2P31629 2446 aa16.05■□□□□ 0.16
TRIM3-214ENST00000536344 J3KRW8 73 aa16.04■□□□□ 0.16
TRIM3-214ENST00000536344 SMR3AQ99954 134 aa16.04■□□□□ 0.16
TRIM3-214ENST00000536344 A6NJY4 79 aa16.04■□□□□ 0.16
TRIM3-214ENST00000536344 SCGB1C2P0DMR2 95 aa16.04■□□□□ 0.16
TRIM3-214ENST00000536344 DEFB136Q30KP8 78 aa16.04■□□□□ 0.16
TRIM3-214ENST00000536344 CFC1BP0CG36 223 aa16.03■□□□□ 0.16
TRIM3-214ENST00000536344 CFC1P0CG37 223 aa16.03■□□□□ 0.16
TRIM3-214ENST00000536344 NDUFV3P56181 108 aaKnown RBP16.03■□□□□ 0.16
TRIM3-214ENST00000536344 C16orf92Q96LL3 132 aa16.03■□□□□ 0.16
TRIM3-214ENST00000536344 IGHV7-4-1A0A0J9YVY3 117 aa16.03■□□□□ 0.16
TRIM3-214ENST00000536344 TRAV12-1A0A0B4J245 112 aa16.03■□□□□ 0.16
TRIM3-214ENST00000536344 NDUFA4O00483 81 aa16.03■□□□□ 0.16
TRIM3-214ENST00000536344 RPL32P62910 135 aaKnown RBP16.03■□□□□ 0.16
TRIM3-214ENST00000536344 C11orf44Q8N8P7 122 aa16.03■□□□□ 0.16
TRIM3-214ENST00000536344 BAALCQ8WXS3 180 aa16.03■□□□□ 0.16
TRIM3-214ENST00000536344 RAX2Q96IS3 184 aa16.03■□□□□ 0.16
TRIM3-214ENST00000536344 DUX3Q96PT4 197 aa16.03■□□□□ 0.16
TRIM3-214ENST00000536344 U3KQE9 123 aa16.03■□□□□ 0.16
TRIM3-214ENST00000536344 SETXQ7Z333 2677 aaKnown RBP16.02■□□□□ 0.16
TRIM3-214ENST00000536344 RHODO00212 210 aa16.02■□□□□ 0.16
TRIM3-214ENST00000536344 RPL39LQ96EH5 51 aaKnown RBP16.02■□□□□ 0.16
TRIM3-214ENST00000536344 C20orf173Q96LM9 149 aa16.02■□□□□ 0.16
TRIM3-214ENST00000536344 H3BUA1 57 aa16.02■□□□□ 0.15
TRIM3-214ENST00000536344 SBSPONQ8IVN8 264 aa16.02■□□□□ 0.15
TRIM3-214ENST00000536344 RHPN1-AS1Q9BWJ2 59 aa16.02■□□□□ 0.15
TRIM3-214ENST00000536344 YAE1D1Q9NRH1 226 aa16.02■□□□□ 0.15
TRIM3-214ENST00000536344 C9orf139Q6ZV77 190 aa16.01■□□□□ 0.15
TRIM3-214ENST00000536344 SMIM2Q9BVW6 85 aa16.01■□□□□ 0.15
TRIM3-214ENST00000536344 C9JAW5 83 aa16.01■□□□□ 0.15
TRIM3-214ENST00000536344 GAGE2BQ13066 116 aa16.01■□□□□ 0.15
TRIM3-214ENST00000536344 GAGE2EQ4V326 116 aa16.01■□□□□ 0.15
TRIM3-214ENST00000536344 KHDC1LQ5JSQ8 128 aa16.01■□□□□ 0.15
TRIM3-214ENST00000536344 SPANXN1Q5VSR9 72 aa16.01■□□□□ 0.15
TRIM3-214ENST00000536344 GPHB5Q86YW7 130 aa16.01■□□□□ 0.15
TRIM3-214ENST00000536344 GAGE2DQ9UEU5 116 aa16.01■□□□□ 0.15
TRIM3-214ENST00000536344 TMEM190Q8WZ59 177 aa16■□□□□ 0.15
TRIM3-214ENST00000536344 F6UB75 175 aa16■□□□□ 0.15
TRIM3-214ENST00000536344 H7C2G1 150 aa16■□□□□ 0.15
TRIM3-214ENST00000536344 SLC25A20O43772 301 aa15.99■□□□□ 0.15
TRIM3-214ENST00000536344 A0A0J9YY99 117 aa15.99■□□□□ 0.15
TRIM3-214ENST00000536344 GAGE12JA6NER3 117 aa15.99■□□□□ 0.15
TRIM3-214ENST00000536344 GAGE7O76087 117 aa15.99■□□□□ 0.15
TRIM3-214ENST00000536344 BRI3O95415 125 aa15.99■□□□□ 0.15
TRIM3-214ENST00000536344 GAGE12FP0CL80 117 aa15.99■□□□□ 0.15
TRIM3-214ENST00000536344 GAGE12GP0CL81 117 aa15.99■□□□□ 0.15
TRIM3-214ENST00000536344 GAGE12IP0CL82 117 aa15.99■□□□□ 0.15
TRIM3-214ENST00000536344 GAGE4Q13068 117 aa15.99■□□□□ 0.15
TRIM3-214ENST00000536344 C3orf56Q8N813 242 aa15.99■□□□□ 0.15
TRIM3-214ENST00000536344 SYNJ2BPP57105 145 aa15.98■□□□□ 0.15
TRIM3-214ENST00000536344 TOMM6Q96B49 74 aa15.98■□□□□ 0.15
TRIM3-214ENST00000536344 AGPAT4-IT1Q9H0P7 198 aa15.98■□□□□ 0.15
TRIM3-214ENST00000536344 TSPEAR-AS2P59090 65 aa15.98■□□□□ 0.15
TRIM3-214ENST00000536344 KRTAP1-1Q07627 177 aa15.98■□□□□ 0.15
TRIM3-214ENST00000536344 ELANEP08246 267 aa15.97■□□□□ 0.15
TRIM3-214ENST00000536344 SRSF2Q01130 221 aaKnown RBP15.97■□□□□ 0.15
TRIM3-214ENST00000536344 C2orf66Q6UXQ4 117 aa15.97■□□□□ 0.15
TRIM3-214ENST00000536344 IGHV4OR15-8A0A075B7B6 117 aa15.97■□□□□ 0.15
TRIM3-214ENST00000536344 A0A087WW49 117 aa15.97■□□□□ 0.15
TRIM3-214ENST00000536344 SNCGO76070 127 aa15.97■□□□□ 0.15
TRIM3-214ENST00000536344 FAM159AQ6UWV7 190 aa15.97■□□□□ 0.15
TRIM3-214ENST00000536344 DAZ1Q9NQZ3 744 aaKnown RBP15.97■□□□□ 0.15
TRIM3-214ENST00000536344 ESM1Q9NQ30 184 aa15.96■□□□□ 0.15
TRIM3-214ENST00000536344 C11orf86A6NJI1 115 aa15.96■□□□□ 0.15
TRIM3-214ENST00000536344 TMEM262E9PQX1 116 aa15.96■□□□□ 0.15
TRIM3-214ENST00000536344 EIF4EBP3O60516 100 aaPredicted RBP15.96■□□□□ 0.15
TRIM3-214ENST00000536344 C10orf126Q8N4M7 172 aa15.96■□□□□ 0.15
TRIM3-214ENST00000536344 FAM110AQ9BQ89 295 aa15.96■□□□□ 0.15
TRIM3-214ENST00000536344 SLC50A1Q9BRV3 221 aa15.96■□□□□ 0.15
TRIM3-214ENST00000536344 CRYGDP07320 174 aa15.96■□□□□ 0.14
TRIM3-214ENST00000536344 NTN5Q8WTR8 489 aaPredicted RBP15.96■□□□□ 0.14
TRIM3-214ENST00000536344 IGHV3-30P01768 117 aa15.95■□□□□ 0.14
TRIM3-214ENST00000536344 IGHV3-30-5P0DP03 117 aa15.95■□□□□ 0.14
TRIM3-214ENST00000536344 TTC32Q5I0X7 151 aa15.95■□□□□ 0.14
TRIM3-214ENST00000536344 M0R381 172 aa15.95■□□□□ 0.14
TRIM3-214ENST00000536344 NOTCH3Q9UM47 2321 aa15.94■□□□□ 0.14
TRIM3-214ENST00000536344 DNAJC9-AS1A6NH13 148 aa15.94■□□□□ 0.14
TRIM3-214ENST00000536344 DUSP14O95147 198 aaKnown RBP15.94■□□□□ 0.14
TRIM3-214ENST00000536344 SUMO2P61956 95 aaKnown RBP15.94■□□□□ 0.14
TRIM3-214ENST00000536344 VCX2Q9H322 139 aa15.94■□□□□ 0.14
TRIM3-214ENST00000536344 TEX49A0A1B0GTD5 131 aa15.94■□□□□ 0.14
TRIM3-214ENST00000536344 IFITM1P13164 125 aa15.93■□□□□ 0.14
TRIM3-214ENST00000536344 FN1P02751 2386 aaKnown RBP15.93■□□□□ 0.14
TRIM3-214ENST00000536344 LYRM7Q5U5X0 104 aa15.93■□□□□ 0.14
TRIM3-214ENST00000536344 Q8N1Y9 231 aa15.93■□□□□ 0.14
TRIM3-214ENST00000536344 C14orf178Q8N769 122 aaPredicted RBP15.92■□□□□ 0.14
TRIM3-214ENST00000536344 JMJD1CQ15652 2540 aa15.92■□□□□ 0.14
TRIM3-214ENST00000536344 SLURP1P55000 103 aa15.92■□□□□ 0.14
TRIM3-214ENST00000536344 PRR9Q5T870 116 aa15.92■□□□□ 0.14
TRIM3-214ENST00000536344 PRO1854Q9UHT4 67 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms