RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 A8MTW9 85 aa9.84□□□□□ -0.83
VPS33B-202ENST00000535906 OR11H12B2RN74 326 aa9.84□□□□□ -0.83
VPS33B-202ENST00000535906 CRYGDP07320 174 aa9.84□□□□□ -0.83
VPS33B-202ENST00000535906 SAMD5Q5TGI4 173 aa9.84□□□□□ -0.83
VPS33B-202ENST00000535906 OR11H2Q8NH07 326 aa9.84□□□□□ -0.83
VPS33B-202ENST00000535906 PHLDA1Q8WV24 401 aaPredicted RBP9.84□□□□□ -0.83
VPS33B-202ENST00000535906 YAE1D1Q9NRH1 226 aa9.84□□□□□ -0.83
VPS33B-202ENST00000535906 CYSLTR1Q9Y271 337 aa9.84□□□□□ -0.83
VPS33B-202ENST00000535906 SPCS1Q9Y6A9 102 aa9.84□□□□□ -0.83
VPS33B-202ENST00000535906 FABP2P12104 132 aa9.83□□□□□ -0.84
VPS33B-202ENST00000535906 HTN1P15515 57 aa9.83□□□□□ -0.84
VPS33B-202ENST00000535906 CD300EQ496F6 205 aaPredicted RBP9.83□□□□□ -0.84
VPS33B-202ENST00000535906 SYT8Q8NBV8 401 aa9.83□□□□□ -0.84
VPS33B-202ENST00000535906 OR5A1Q8NGJ0 315 aa9.83□□□□□ -0.84
VPS33B-202ENST00000535906 ANK3Q12955 4377 aaKnown RBP9.83□□□□□ -0.84
VPS33B-202ENST00000535906 PRM2P04554 102 aa9.83□□□□□ -0.84
VPS33B-202ENST00000535906 MAP6D1Q9H9H5 199 aa9.83□□□□□ -0.84
VPS33B-202ENST00000535906 NHP2Q9NX24 153 aaKnown RBP9.83□□□□□ -0.84
VPS33B-202ENST00000535906 MYMXA0A1B0GTQ4 84 aa9.82□□□□□ -0.84
VPS33B-202ENST00000535906 VCYO14598 125 aa9.82□□□□□ -0.84
VPS33B-202ENST00000535906 CD28P10747 220 aa9.82□□□□□ -0.84
VPS33B-202ENST00000535906 ZNF876PQ49A33 203 aa9.82□□□□□ -0.84
VPS33B-202ENST00000535906 ZFP2Q6ZN57 461 aa9.82□□□□□ -0.84
VPS33B-202ENST00000535906 E9PLD3 99 aa9.82□□□□□ -0.84
VPS33B-202ENST00000535906 K7ERJ3 54 aa9.82□□□□□ -0.84
VPS33B-202ENST00000535906 RNF151Q2KHN1 245 aa9.82□□□□□ -0.84
VPS33B-202ENST00000535906 KIR2DL4Q99706 377 aa9.82□□□□□ -0.84
VPS33B-202ENST00000535906 TP53TG1Q9Y2A0 90 aa9.82□□□□□ -0.84
VPS33B-202ENST00000535906 ZNF256Q9Y2P7 627 aaPredicted RBP9.82□□□□□ -0.84
VPS33B-202ENST00000535906 TRGV11A0A075B6L2 103 aa9.81□□□□□ -0.84
VPS33B-202ENST00000535906 TRBV6-5A0A0K0K1A5 114 aa9.81□□□□□ -0.84
VPS33B-202ENST00000535906 TSHBP01222 138 aa9.81□□□□□ -0.84
VPS33B-202ENST00000535906 ZNF56Q15929 161 aa9.81□□□□□ -0.84
VPS33B-202ENST00000535906 MORN3Q6PF18 240 aaPredicted RBP9.81□□□□□ -0.84
VPS33B-202ENST00000535906 HIST1H4GQ99525 98 aa9.81□□□□□ -0.84
VPS33B-202ENST00000535906 NIPBLQ6KC79 2804 aaeCLIP9.81□□□□□ -0.84
VPS33B-202ENST00000535906 SDHAF1A6NFY7 115 aa9.81□□□□□ -0.84
VPS33B-202ENST00000535906 IGIPA6NJ69 53 aa9.81□□□□□ -0.84
VPS33B-202ENST00000535906 K7ERU9 68 aa9.81□□□□□ -0.84
VPS33B-202ENST00000535906 M0QY20 66 aa9.81□□□□□ -0.84
VPS33B-202ENST00000535906 FHL3Q13643 280 aa9.81□□□□□ -0.84
VPS33B-202ENST00000535906 TRBV7-3A0A075B6L6 115 aa9.8□□□□□ -0.84
VPS33B-202ENST00000535906 TRBV27A0A0K0K1C4 114 aa9.8□□□□□ -0.84
VPS33B-202ENST00000535906 PCP4P48539 62 aa9.8□□□□□ -0.84
VPS33B-202ENST00000535906 CCL24O00175 119 aa9.8□□□□□ -0.84
VPS33B-202ENST00000535906 LINC01006Q8NI28 216 aa9.8□□□□□ -0.84
VPS33B-202ENST00000535906 TMEM141Q96I45 108 aa9.8□□□□□ -0.84
VPS33B-202ENST00000535906 CITED2Q99967 270 aaPredicted RBP9.8□□□□□ -0.84
VPS33B-202ENST00000535906 PRADC1Q9BSG0 188 aa9.8□□□□□ -0.84
VPS33B-202ENST00000535906 RIPPLY3P57055 190 aa9.79□□□□□ -0.84
VPS33B-202ENST00000535906 TIMM17AQ99595 171 aa9.79□□□□□ -0.84
VPS33B-202ENST00000535906 SPAG8Q99932 426 aaPredicted RBP9.79□□□□□ -0.84
VPS33B-202ENST00000535906 PMVKQ15126 192 aa9.78□□□□□ -0.84
VPS33B-202ENST00000535906 PAPPA-AS1Q5QFB9 102 aa9.78□□□□□ -0.84
VPS33B-202ENST00000535906 FASNP49327 2511 aaKnown RBP9.78□□□□□ -0.84
VPS33B-202ENST00000535906 IGLV4-69A0A075B6H9 119 aa9.78□□□□□ -0.84
VPS33B-202ENST00000535906 RNASE1P07998 156 aaKnown RBP9.78□□□□□ -0.84
VPS33B-202ENST00000535906 RPL39P62891 51 aaKnown RBP9.78□□□□□ -0.84
VPS33B-202ENST00000535906 C12orf74Q32Q52 190 aa9.78□□□□□ -0.84
VPS33B-202ENST00000535906 ODF3L2Q3SX64 289 aa9.77□□□□□ -0.84
VPS33B-202ENST00000535906 GCN1Q92616 2671 aaKnown RBP9.77□□□□□ -0.84
VPS33B-202ENST00000535906 C11orf86A6NJI1 115 aa9.77□□□□□ -0.85
VPS33B-202ENST00000535906 IGLL5B9A064 214 aa9.77□□□□□ -0.85
VPS33B-202ENST00000535906 VPS25Q9BRG1 176 aa9.77□□□□□ -0.85
VPS33B-202ENST00000535906 ZNF815PA8K554 130 aa9.76□□□□□ -0.85
VPS33B-202ENST00000535906 A0A1B0GWB2 263 aa9.76□□□□□ -0.85
VPS33B-202ENST00000535906 SAP30O75446 220 aa9.76□□□□□ -0.85
VPS33B-202ENST00000535906 TRPT1Q86TN4 253 aaKnown RBP9.76□□□□□ -0.85
VPS33B-202ENST00000535906 C16orf95Q9H693 158 aa9.76□□□□□ -0.85
VPS33B-202ENST00000535906 TSSC4Q9Y5U2 329 aaPredicted RBP9.76□□□□□ -0.85
VPS33B-202ENST00000535906 IGHV3-73A0A0B4J1V6 119 aa9.75□□□□□ -0.85
VPS33B-202ENST00000535906 SCGB2A2Q13296 93 aa9.75□□□□□ -0.85
VPS33B-202ENST00000535906 SMR3AQ99954 134 aa9.75□□□□□ -0.85
VPS33B-202ENST00000535906 TRAV25A0A0B4J276 109 aa9.75□□□□□ -0.85
VPS33B-202ENST00000535906 PROK1P58294 105 aa9.75□□□□□ -0.85
VPS33B-202ENST00000535906 HERVK_113P61574 105 aa9.75□□□□□ -0.85
VPS33B-202ENST00000535906 RHOHQ15669 191 aa9.75□□□□□ -0.85
VPS33B-202ENST00000535906 NSUN5P1Q3KNT7 163 aa9.75□□□□□ -0.85
VPS33B-202ENST00000535906 ZNF479Q96JC4 524 aa9.75□□□□□ -0.85
VPS33B-202ENST00000535906 LINC01587Q99440 93 aa9.75□□□□□ -0.85
VPS33B-202ENST00000535906 NACAE9PAV3 2078 aa9.74□□□□□ -0.85
VPS33B-202ENST00000535906 M0R2P5 195 aa9.74□□□□□ -0.85
VPS33B-202ENST00000535906 EMP1P54849 157 aa9.74□□□□□ -0.85
VPS33B-202ENST00000535906 HECTD1Q9ULT8 2610 aa9.73□□□□□ -0.85
VPS33B-202ENST00000535906 P0DMU3 169 aa9.73□□□□□ -0.85
VPS33B-202ENST00000535906 FAM231AP0DMU4 169 aa9.73□□□□□ -0.85
VPS33B-202ENST00000535906 FAM231CP0DMU5 169 aa9.73□□□□□ -0.85
VPS33B-202ENST00000535906 C21orf62-AS1Q17RA5 79 aa9.73□□□□□ -0.85
VPS33B-202ENST00000535906 SCGB1D4Q6XE38 83 aa9.73□□□□□ -0.85
VPS33B-202ENST00000535906 C11orf72Q8NBR9 251 aa9.73□□□□□ -0.85
VPS33B-202ENST00000535906 PLEKHB2Q96CS7 222 aa9.73□□□□□ -0.85
VPS33B-202ENST00000535906 XCL2Q9UBD3 114 aa9.73□□□□□ -0.85
VPS33B-202ENST00000535906 G3V4G9 280 aa9.73□□□□□ -0.85
VPS33B-202ENST00000535906 INSP01308 110 aa9.73□□□□□ -0.85
VPS33B-202ENST00000535906 ZNF415Q09FC8 603 aa9.73□□□□□ -0.85
VPS33B-202ENST00000535906 SETXQ7Z333 2677 aaKnown RBP9.73□□□□□ -0.85
VPS33B-202ENST00000535906 HILS1P60008 231 aa9.72□□□□□ -0.85
VPS33B-202ENST00000535906 RRN3P1Q2M238 152 aa9.72□□□□□ -0.85
VPS33B-202ENST00000535906 STHQ8IWL8 128 aa9.72□□□□□ -0.85
VPS33B-202ENST00000535906 ZNRF2Q8NHG8 242 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms