RNA–Protein interactions for RNA: ENST00000535180.5

VAMP1-204, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3 BASIC

Gene VAMP1, Length 747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-204ENST00000535180 ASB16-AS1Q495Z4 193 aa6.24□□□□□ -1.41
VAMP1-204ENST00000535180 STX12Q86Y82 276 aa6.24□□□□□ -1.41
VAMP1-204ENST00000535180 TMEM252Q8N6L7 170 aa6.24□□□□□ -1.41
VAMP1-204ENST00000535180 THAP6Q8TBB0 222 aa6.24□□□□□ -1.41
VAMP1-204ENST00000535180 LINC00526Q96FQ7 95 aa6.24□□□□□ -1.41
VAMP1-204ENST00000535180 VCX3AQ9NNX9 186 aa6.24□□□□□ -1.41
VAMP1-204ENST00000535180 K7EQM0 130 aa6.23□□□□□ -1.41
VAMP1-204ENST00000535180 TCRAP04437 139 aa6.23□□□□□ -1.41
VAMP1-204ENST00000535180 TPT1P13693 172 aaKnown RBP6.23□□□□□ -1.41
VAMP1-204ENST00000535180 FLI1Q01543 452 aaPredicted RBP6.23□□□□□ -1.41
VAMP1-204ENST00000535180 SYCNQ0VAF6 134 aa6.23□□□□□ -1.41
VAMP1-204ENST00000535180 SAPCD1Q5SSQ6 148 aa6.23□□□□□ -1.41
VAMP1-204ENST00000535180 PRNTQ86SH4 94 aa6.23□□□□□ -1.41
VAMP1-204ENST00000535180 ZFP82Q8N141 532 aa6.23□□□□□ -1.41
VAMP1-204ENST00000535180 CHCHD10Q8WYQ3 142 aaPredicted RBP6.23□□□□□ -1.41
VAMP1-204ENST00000535180 SSBP4Q9BWG4 385 aaPredicted RBP6.23□□□□□ -1.41
VAMP1-204ENST00000535180 KCNIP2Q9NS61 270 aa6.23□□□□□ -1.41
VAMP1-204ENST00000535180 FGF6P10767 208 aa6.22□□□□□ -1.41
VAMP1-204ENST00000535180 AP3S2P59780 193 aa6.22□□□□□ -1.41
VAMP1-204ENST00000535180 MT1HP80294 61 aa6.22□□□□□ -1.41
VAMP1-204ENST00000535180 KRTAP11-1Q8IUC1 163 aa6.22□□□□□ -1.41
VAMP1-204ENST00000535180 TOMM5Q8N4H5 51 aa6.22□□□□□ -1.41
VAMP1-204ENST00000535180 MRPS26Q9BYN8 205 aaKnown RBP6.22□□□□□ -1.41
VAMP1-204ENST00000535180 IGKV3OR2-268A0A0C4DH90 116 aa6.21□□□□□ -1.42
VAMP1-204ENST00000535180 GRIFINA4D1Z8 144 aa6.21□□□□□ -1.42
VAMP1-204ENST00000535180 KRBOX1C9JBD0 128 aa6.21□□□□□ -1.42
VAMP1-204ENST00000535180 PVALBP20472 110 aaPredicted RBP6.21□□□□□ -1.42
VAMP1-204ENST00000535180 TMEM243Q9BU79 118 aa6.21□□□□□ -1.42
VAMP1-204ENST00000535180 SSPOA2VEC9 5147 aa6.2□□□□□ -1.42
VAMP1-204ENST00000535180 KRTAP10-6P60371 365 aaPredicted RBP6.2□□□□□ -1.42
VAMP1-204ENST00000535180 FOXI1Q12951 378 aa6.2□□□□□ -1.42
VAMP1-204ENST00000535180 C5orf17Q8NAS9 161 aa6.2□□□□□ -1.42
VAMP1-204ENST00000535180 TSKUQ8WUA8 353 aa6.2□□□□□ -1.42
VAMP1-204ENST00000535180 DEDD2Q8WXF8 326 aa6.2□□□□□ -1.42
VAMP1-204ENST00000535180 SDHCQ99643 169 aaPredicted RBP6.2□□□□□ -1.42
VAMP1-204ENST00000535180 SYNE2Q8WXH0 6885 aaKnown RBP6.2□□□□□ -1.42
VAMP1-204ENST00000535180 A0A087WXM4 84 aa6.19□□□□□ -1.42
VAMP1-204ENST00000535180 IGHV1-58A0A0C4DH39 117 aa6.19□□□□□ -1.42
VAMP1-204ENST00000535180 C17orf112F2Z3M2 114 aa6.19□□□□□ -1.42
VAMP1-204ENST00000535180 F5H697 171 aa6.19□□□□□ -1.42
VAMP1-204ENST00000535180 M0R036 132 aa6.19□□□□□ -1.42
VAMP1-204ENST00000535180 BCL2P10415 239 aa6.19□□□□□ -1.42
VAMP1-204ENST00000535180 PQLC2Q6ZP29 291 aa6.19□□□□□ -1.42
VAMP1-204ENST00000535180 LINC00173Q6ZV60 143 aa6.19□□□□□ -1.42
VAMP1-204ENST00000535180 NAA50Q9GZZ1 169 aaKnown RBP6.19□□□□□ -1.42
VAMP1-204ENST00000535180 PPDPFQ9H3Y8 114 aa6.19□□□□□ -1.42
VAMP1-204ENST00000535180 A0A087X002 238 aa6.18□□□□□ -1.42
VAMP1-204ENST00000535180 ZNF561-AS1K7EIQ3 104 aa6.18□□□□□ -1.42
VAMP1-204ENST00000535180 TMBIM6P55061 237 aa6.18□□□□□ -1.42
VAMP1-204ENST00000535180 TYMSOSQ8TAI1 123 aa6.18□□□□□ -1.42
VAMP1-204ENST00000535180 WDR61Q9GZS3 305 aaKnown RBP6.18□□□□□ -1.42
VAMP1-204ENST00000535180 UBE2L6O14933 153 aa6.17□□□□□ -1.42
VAMP1-204ENST00000535180 ATP6V1G2O95670 118 aa6.17□□□□□ -1.42
VAMP1-204ENST00000535180 NHLH2Q02577 135 aa6.17□□□□□ -1.42
VAMP1-204ENST00000535180 ISOC2Q96AB3 205 aa6.17□□□□□ -1.42
VAMP1-204ENST00000535180 FLVCR2Q9UPI3 526 aa6.17□□□□□ -1.42
VAMP1-204ENST00000535180 NDUFB6O95139 128 aa6.16□□□□□ -1.42
VAMP1-204ENST00000535180 APOMO95445 188 aa6.16□□□□□ -1.42
VAMP1-204ENST00000535180 RPL12P30050 165 aaKnown RBP6.16□□□□□ -1.42
VAMP1-204ENST00000535180 CAMPP49913 170 aa6.16□□□□□ -1.42
VAMP1-204ENST00000535180 CRIP1P50238 77 aa6.16□□□□□ -1.42
VAMP1-204ENST00000535180 KRTAP19-2Q3LHN2 52 aa6.16□□□□□ -1.42
VAMP1-204ENST00000535180 EIF5AL1Q6IS14 154 aaKnown RBP6.16□□□□□ -1.42
VAMP1-204ENST00000535180 MED28Q9H204 178 aa6.16□□□□□ -1.42
VAMP1-204ENST00000535180 EPDR1Q9UM22 224 aa6.16□□□□□ -1.42
VAMP1-204ENST00000535180 ARL2-SNX15V9GYD0 113 aa6.16□□□□□ -1.42
VAMP1-204ENST00000535180 FAM25EA8MYX2 175 aa6.15□□□□□ -1.42
VAMP1-204ENST00000535180 H3BMQ9 156 aa6.15□□□□□ -1.42
VAMP1-204ENST00000535180 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.15□□□□□ -1.42
VAMP1-204ENST00000535180 SEC61BP60468 96 aaKnown RBP6.15□□□□□ -1.42
VAMP1-204ENST00000535180 MEF2BQ02080 365 aaPredicted RBP6.15□□□□□ -1.42
VAMP1-204ENST00000535180 RPL18AQ02543 176 aaKnown RBP6.15□□□□□ -1.42
VAMP1-204ENST00000535180 NUP35Q8NFH5 326 aa6.15□□□□□ -1.42
VAMP1-204ENST00000535180 USH2AO75445 5202 aa6.15□□□□□ -1.43
VAMP1-204ENST00000535180 IGLV4-69A0A075B6H9 119 aa6.14□□□□□ -1.43
VAMP1-204ENST00000535180 TMSB15BA0A087X1C1 80 aa6.14□□□□□ -1.43
VAMP1-204ENST00000535180 LINC01559Q495D7 138 aa6.14□□□□□ -1.43
VAMP1-204ENST00000535180 LINC00337Q8N6G1 96 aa6.14□□□□□ -1.43
VAMP1-204ENST00000535180 FCGBPQ9Y6R7 5405 aaPredicted RBP6.14□□□□□ -1.43
VAMP1-204ENST00000535180 TRAV34A0A0B4J273 112 aa6.13□□□□□ -1.43
VAMP1-204ENST00000535180 ZNF861PO60384 105 aa6.13□□□□□ -1.43
VAMP1-204ENST00000535180 SH2D1AO60880 128 aa6.13□□□□□ -1.43
VAMP1-204ENST00000535180 XCL1P47992 114 aa6.13□□□□□ -1.43
VAMP1-204ENST00000535180 SUMO1P63165 101 aaKnown RBP6.13□□□□□ -1.43
VAMP1-204ENST00000535180 IL15RAQ13261 267 aa6.13□□□□□ -1.43
VAMP1-204ENST00000535180 RAB32Q13637 225 aa6.13□□□□□ -1.43
VAMP1-204ENST00000535180 OR10AG1Q8NH19 301 aa6.13□□□□□ -1.43
VAMP1-204ENST00000535180 PGLYRP4Q96LB8 373 aa6.13□□□□□ -1.43
VAMP1-204ENST00000535180 ZNF471Q9BX82 626 aaPredicted RBP6.13□□□□□ -1.43
VAMP1-204ENST00000535180 RBM38Q9H0Z9 239 aaKnown RBP6.13□□□□□ -1.43
VAMP1-204ENST00000535180 MACF1Q9UPN3 7388 aaKnown RBP6.12□□□□□ -1.43
VAMP1-204ENST00000535180 A0A1W2PPV4 95 aa6.12□□□□□ -1.43
VAMP1-204ENST00000535180 FAM168BA1KXE4 195 aa6.12□□□□□ -1.43
VAMP1-204ENST00000535180 A6NHS1 94 aa6.12□□□□□ -1.43
VAMP1-204ENST00000535180 M0QY20 66 aa6.12□□□□□ -1.43
VAMP1-204ENST00000535180 TSHBP01222 138 aa6.12□□□□□ -1.43
VAMP1-204ENST00000535180 PYDC2Q56P42 97 aa6.12□□□□□ -1.43
VAMP1-204ENST00000535180 LINC00304Q8N9R0 145 aa6.12□□□□□ -1.43
VAMP1-204ENST00000535180 HMGB3O15347 200 aaKnown RBP6.11□□□□□ -1.43
VAMP1-204ENST00000535180 ARL14EPLP0DKL9 152 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms