RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 C3orf84H3BNL1 204 aa3.72□□□□□ -1.81
SNHG1-201ENST00000535076 M0R3E3 92 aa3.72□□□□□ -1.81
SNHG1-201ENST00000535076 NTN3O00634 580 aaPredicted RBP3.72□□□□□ -1.81
SNHG1-201ENST00000535076 SOCS3O14543 225 aa3.72□□□□□ -1.81
SNHG1-201ENST00000535076 PRYO14603 147 aa3.72□□□□□ -1.81
SNHG1-201ENST00000535076 PROK1P58294 105 aa3.72□□□□□ -1.81
SNHG1-201ENST00000535076 MRPS21P82921 87 aaKnown RBP3.72□□□□□ -1.81
SNHG1-201ENST00000535076 PATE2Q6UY27 113 aa3.72□□□□□ -1.81
SNHG1-201ENST00000535076 ZNF833PQ6ZTB9 187 aa3.72□□□□□ -1.81
SNHG1-201ENST00000535076 TMEM61Q8N0U2 210 aa3.72□□□□□ -1.81
SNHG1-201ENST00000535076 ITLN2Q8WWU7 325 aaPredicted RBP3.72□□□□□ -1.81
SNHG1-201ENST00000535076 SMIM14Q96QK8 99 aa3.72□□□□□ -1.81
SNHG1-201ENST00000535076 KLK15Q9H2R5 256 aa3.72□□□□□ -1.81
SNHG1-201ENST00000535076 C22orf24Q9Y442 160 aa3.72□□□□□ -1.81
SNHG1-201ENST00000535076 PCNX2A6NKB5 2137 aa3.71□□□□□ -1.81
SNHG1-201ENST00000535076 CABIN1Q9Y6J0 2220 aa3.71□□□□□ -1.82
SNHG1-201ENST00000535076 IGHV6-1A0A0B4J1U7 121 aa3.71□□□□□ -1.82
SNHG1-201ENST00000535076 C16orf90A8MZG2 172 aa3.71□□□□□ -1.82
SNHG1-201ENST00000535076 C2orf83Q53S99 150 aa3.71□□□□□ -1.82
SNHG1-201ENST00000535076 MORN5Q5VZ52 161 aa3.71□□□□□ -1.82
SNHG1-201ENST00000535076 LYZL1Q6UWQ5 148 aa3.71□□□□□ -1.82
SNHG1-201ENST00000535076 CLEC2BQ92478 149 aa3.71□□□□□ -1.82
SNHG1-201ENST00000535076 RMI2Q96E14 147 aa3.71□□□□□ -1.82
SNHG1-201ENST00000535076 CDC42SE1Q9NRR8 79 aa3.71□□□□□ -1.82
SNHG1-201ENST00000535076 SPTBP11277 2137 aa3.71□□□□□ -1.82
SNHG1-201ENST00000535076 CACNA1CQ13936 2221 aa3.71□□□□□ -1.82
SNHG1-201ENST00000535076 ABCA7Q8IZY2 2146 aa3.7□□□□□ -1.82
SNHG1-201ENST00000535076 TRAV23DV6A0A075B6W5 121 aa3.7□□□□□ -1.82
SNHG1-201ENST00000535076 IGKV1-12A0A0C4DH73 117 aa3.7□□□□□ -1.82
SNHG1-201ENST00000535076 JMJD7-PLA2G4BH0Y9G9 81 aa3.7□□□□□ -1.82
SNHG1-201ENST00000535076 IGKV1D-12P01611 117 aa3.7□□□□□ -1.82
SNHG1-201ENST00000535076 IGLV2-11P01706 119 aa3.7□□□□□ -1.82
SNHG1-201ENST00000535076 HOXA4Q00056 320 aaPredicted RBP3.7□□□□□ -1.82
SNHG1-201ENST00000535076 DAZAP2Q15038 168 aaPredicted RBP3.7□□□□□ -1.82
SNHG1-201ENST00000535076 MIAQ16674 131 aa3.7□□□□□ -1.82
SNHG1-201ENST00000535076 PIGYQ3MUY2 71 aa3.7□□□□□ -1.82
SNHG1-201ENST00000535076 C6orf99Q4VX62 202 aa3.7□□□□□ -1.82
SNHG1-201ENST00000535076 ADAMTSL4-AS1Q5T5F5 129 aa3.7□□□□□ -1.82
SNHG1-201ENST00000535076 C10orf113Q5VZT2 155 aa3.7□□□□□ -1.82
SNHG1-201ENST00000535076 SCXQ7RTU7 201 aa3.7□□□□□ -1.82
SNHG1-201ENST00000535076 KLHL30-AS1Q8NEE0 82 aa3.7□□□□□ -1.82
SNHG1-201ENST00000535076 TMEM254Q8TBM7 123 aa3.7□□□□□ -1.82
SNHG1-201ENST00000535076 KLF14Q8TD94 323 aaPredicted RBP3.7□□□□□ -1.82
SNHG1-201ENST00000535076 TMEM14BQ9NUH8 114 aa3.7□□□□□ -1.82
SNHG1-201ENST00000535076 NDUFA12Q9UI09 145 aa3.7□□□□□ -1.82
SNHG1-201ENST00000535076 SRCAPQ6ZRS2 3230 aa3.7□□□□□ -1.82
SNHG1-201ENST00000535076 NACAE9PAV3 2078 aa3.69□□□□□ -1.82
SNHG1-201ENST00000535076 IGHV4-4A0A075B6R2 117 aa3.69□□□□□ -1.82
SNHG1-201ENST00000535076 IGKV1-27A0A075B6S5 117 aa3.69□□□□□ -1.82
SNHG1-201ENST00000535076 A0A087WZ39 114 aa3.69□□□□□ -1.82
SNHG1-201ENST00000535076 TRBV6-8A0A0A6YYG3 113 aa3.69□□□□□ -1.82
SNHG1-201ENST00000535076 H7C2G1 150 aa3.69□□□□□ -1.82
SNHG1-201ENST00000535076 FXYD7P58549 80 aa3.69□□□□□ -1.82
SNHG1-201ENST00000535076 SUMO2P61956 95 aaKnown RBP3.69□□□□□ -1.82
SNHG1-201ENST00000535076 Q5VV11 94 aa3.69□□□□□ -1.82
SNHG1-201ENST00000535076 C9orf106Q8NAJ2 232 aa3.69□□□□□ -1.82
SNHG1-201ENST00000535076 SMIM2Q9BVW6 85 aa3.69□□□□□ -1.82
SNHG1-201ENST00000535076 UBL5Q9BZL1 73 aa3.69□□□□□ -1.82
SNHG1-201ENST00000535076 TNRC6BQ9UPQ9 1833 aaKnown RBP3.68□□□□□ -1.82
SNHG1-201ENST00000535076 IGLV4-69A0A075B6H9 119 aa3.68□□□□□ -1.82
SNHG1-201ENST00000535076 IGHV1-45A0A0A0MS14 117 aa3.68□□□□□ -1.82
SNHG1-201ENST00000535076 A0A0J9YXV3 536 aa3.68□□□□□ -1.82
SNHG1-201ENST00000535076 HCG22E2RYF7 251 aa3.68□□□□□ -1.82
SNHG1-201ENST00000535076 H0YGX0 51 aa3.68□□□□□ -1.82
SNHG1-201ENST00000535076 M0R1W7 72 aa3.68□□□□□ -1.82
SNHG1-201ENST00000535076 TRGV3P03979 118 aa3.68□□□□□ -1.82
SNHG1-201ENST00000535076 C18orf65Q6ZTR6 163 aa3.68□□□□□ -1.82
SNHG1-201ENST00000535076 PRNTQ86SH4 94 aa3.68□□□□□ -1.82
SNHG1-201ENST00000535076 C14orf178Q8N769 122 aaPredicted RBP3.68□□□□□ -1.82
SNHG1-201ENST00000535076 LITAFQ99732 161 aa3.68□□□□□ -1.82
SNHG1-201ENST00000535076 KIF25-AS1Q9Y6Z4 181 aa3.68□□□□□ -1.82
SNHG1-201ENST00000535076 PRRC2AP48634 2157 aaKnown RBP3.68□□□□□ -1.82
SNHG1-201ENST00000535076 LOC101927531A0A1B0GV80 90 aa3.67□□□□□ -1.82
SNHG1-201ENST00000535076 IGKV1-16P04430 117 aa3.67□□□□□ -1.82
SNHG1-201ENST00000535076 PATE4P0C8F1 98 aa3.67□□□□□ -1.82
SNHG1-201ENST00000535076 RPL27AP46776 148 aaKnown RBP3.67□□□□□ -1.82
SNHG1-201ENST00000535076 BRWD1-AS2P59051 145 aa3.67□□□□□ -1.82
SNHG1-201ENST00000535076 ELOF1P60002 83 aaKnown RBP3.67□□□□□ -1.82
SNHG1-201ENST00000535076 SNURFQ9Y675 71 aa3.67□□□□□ -1.82
SNHG1-201ENST00000535076 COL4A1P02462 1669 aa3.67□□□□□ -1.82
SNHG1-201ENST00000535076 IGLV3-12A0A075B6K2 115 aa3.66□□□□□ -1.82
SNHG1-201ENST00000535076 IGLV3-9A0A075B6K5 115 aa3.66□□□□□ -1.82
SNHG1-201ENST00000535076 C12orf77C9JDV5 145 aa3.66□□□□□ -1.82
SNHG1-201ENST00000535076 C5orf67F2Z3F1 127 aa3.66□□□□□ -1.82
SNHG1-201ENST00000535076 PSCAO43653 123 aa3.66□□□□□ -1.82
SNHG1-201ENST00000535076 PROP1O75360 226 aa3.66□□□□□ -1.82
SNHG1-201ENST00000535076 IGHV1-69P01742 117 aa3.66□□□□□ -1.82
SNHG1-201ENST00000535076 LMO4P61968 165 aa3.66□□□□□ -1.82
SNHG1-201ENST00000535076 C9orf116Q5BN46 136 aaPredicted RBP3.66□□□□□ -1.82
SNHG1-201ENST00000535076 C10orf128Q5T292 105 aa3.66□□□□□ -1.82
SNHG1-201ENST00000535076 C11orf71Q6IPW1 123 aa3.66□□□□□ -1.82
SNHG1-201ENST00000535076 ENHOQ6UWT2 76 aa3.66□□□□□ -1.82
SNHG1-201ENST00000535076 MAP6D1Q9H9H5 199 aa3.66□□□□□ -1.82
SNHG1-201ENST00000535076 MRPL36Q9P0J6 103 aaKnown RBP3.66□□□□□ -1.82
SNHG1-201ENST00000535076 FER1L5A0AVI2 2057 aa3.66□□□□□ -1.82
SNHG1-201ENST00000535076 IGKV1OR2-108A0A075B7D4 117 aa3.65□□□□□ -1.83
SNHG1-201ENST00000535076 IGKV1-8A0A0C4DH67 115 aa3.65□□□□□ -1.83
SNHG1-201ENST00000535076 ZNHIT1O43257 154 aa3.65□□□□□ -1.83
SNHG1-201ENST00000535076 LHBP01229 141 aa3.65□□□□□ -1.83
SNHG1-201ENST00000535076 PDE6GP18545 87 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms