RNA–Protein interactions for RNA: ENST00000534313.5

SIPA1-209, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,521 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-209ENST00000534313 SYNJ2BPP57105 145 aa12.87□□□□□ -0.35
SIPA1-209ENST00000534313 NPC2P61916 151 aa12.87□□□□□ -0.35
SIPA1-209ENST00000534313 TCTEX1D4Q5JR98 221 aa12.87□□□□□ -0.35
SIPA1-209ENST00000534313 APRG1Q8IVJ8 170 aa12.87□□□□□ -0.35
SIPA1-209ENST00000534313 ANKRD29Q8N6D5 301 aa12.87□□□□□ -0.35
SIPA1-209ENST00000534313 TEN1Q86WV5 123 aa12.86□□□□□ -0.35
SIPA1-209ENST00000534313 PRO0461Q9UI25 63 aa12.86□□□□□ -0.35
SIPA1-209ENST00000534313 C2CD3Q4AC94 2353 aa12.86□□□□□ -0.35
SIPA1-209ENST00000534313 GATA3P23771 443 aa12.85□□□□□ -0.35
SIPA1-209ENST00000534313 HIST2H2BDQ6DRA6 164 aa12.85□□□□□ -0.35
SIPA1-209ENST00000534313 SMCPP49901 116 aaPredicted RBP12.85□□□□□ -0.35
SIPA1-209ENST00000534313 GAGE2BQ13066 116 aa12.85□□□□□ -0.35
SIPA1-209ENST00000534313 GAGE2EQ4V326 116 aa12.85□□□□□ -0.35
SIPA1-209ENST00000534313 TRPT1Q86TN4 253 aaKnown RBP12.85□□□□□ -0.35
SIPA1-209ENST00000534313 GAGE2DQ9UEU5 116 aa12.85□□□□□ -0.35
SIPA1-209ENST00000534313 IGSF10Q6WRI0 2623 aa12.85□□□□□ -0.35
SIPA1-209ENST00000534313 IGLV4-69A0A075B6H9 119 aa12.85□□□□□ -0.35
SIPA1-209ENST00000534313 MED14OSP0DP75 135 aa12.85□□□□□ -0.35
SIPA1-209ENST00000534313 Q8N1Y9 231 aa12.85□□□□□ -0.35
SIPA1-209ENST00000534313 PRM2P04554 102 aa12.84□□□□□ -0.35
SIPA1-209ENST00000534313 CFHR3Q02985 330 aa12.84□□□□□ -0.35
SIPA1-209ENST00000534313 ADARB2-AS1A8MUL3 147 aa12.84□□□□□ -0.35
SIPA1-209ENST00000534313 IGHV3-73A0A0B4J1V6 119 aa12.84□□□□□ -0.35
SIPA1-209ENST00000534313 SLC25A20O43772 301 aa12.84□□□□□ -0.35
SIPA1-209ENST00000534313 POLR2KP53803 58 aaKnown RBP12.84□□□□□ -0.35
SIPA1-209ENST00000534313 CDIP1Q9H305 208 aa12.84□□□□□ -0.35
SIPA1-209ENST00000534313 PRO1854Q9UHT4 67 aa12.84□□□□□ -0.35
SIPA1-209ENST00000534313 NDUFA11Q86Y39 141 aa12.83□□□□□ -0.36
SIPA1-209ENST00000534313 ERG28Q9UKR5 140 aa12.83□□□□□ -0.36
SIPA1-209ENST00000534313 TLN2Q9Y4G6 2542 aa12.83□□□□□ -0.36
SIPA1-209ENST00000534313 IGIPA6NJ69 53 aa12.83□□□□□ -0.36
SIPA1-209ENST00000534313 PSMB8P28062 276 aa12.83□□□□□ -0.36
SIPA1-209ENST00000534313 TSPEAR-AS2P59090 65 aa12.83□□□□□ -0.36
SIPA1-209ENST00000534313 ANKRD17O75179 2603 aaKnown RBP12.83□□□□□ -0.36
SIPA1-209ENST00000534313 NACAE9PAV3 2078 aa12.83□□□□□ -0.36
SIPA1-209ENST00000534313 MYO9AB2RTY4 2548 aa12.82□□□□□ -0.36
SIPA1-209ENST00000534313 B4DSR2 109 aa12.82□□□□□ -0.36
SIPA1-209ENST00000534313 NTN5Q8WTR8 489 aaPredicted RBP12.82□□□□□ -0.36
SIPA1-209ENST00000534313 VCYO14598 125 aa12.82□□□□□ -0.36
SIPA1-209ENST00000534313 NXPH4O95158 308 aa12.82□□□□□ -0.36
SIPA1-209ENST00000534313 PPP1R17O96001 155 aa12.82□□□□□ -0.36
SIPA1-209ENST00000534313 PTPN13Q12923 2485 aa12.82□□□□□ -0.36
SIPA1-209ENST00000534313 IGHV3-16A0A0C4DH30 117 aa12.82□□□□□ -0.36
SIPA1-209ENST00000534313 ZNRF2Q8NHG8 242 aa12.82□□□□□ -0.36
SIPA1-209ENST00000534313 LRRK2Q5S007 2527 aa12.81□□□□□ -0.36
SIPA1-209ENST00000534313 COX6B1P14854 86 aa12.81□□□□□ -0.36
SIPA1-209ENST00000534313 PMVKQ15126 192 aa12.81□□□□□ -0.36
SIPA1-209ENST00000534313 ABCA12Q86UK0 2595 aa12.81□□□□□ -0.36
SIPA1-209ENST00000534313 A4D1N5 150 aa12.81□□□□□ -0.36
SIPA1-209ENST00000534313 MXRA5Q9NR99 2828 aa12.81□□□□□ -0.36
SIPA1-209ENST00000534313 IGHV4OR15-8A0A075B7B6 117 aa12.8□□□□□ -0.36
SIPA1-209ENST00000534313 A0A087WW49 117 aa12.8□□□□□ -0.36
SIPA1-209ENST00000534313 TMEM262E9PQX1 116 aa12.8□□□□□ -0.36
SIPA1-209ENST00000534313 A0A0J9YX75 114 aa12.8□□□□□ -0.36
SIPA1-209ENST00000534313 J3QQQ9 107 aa12.8□□□□□ -0.36
SIPA1-209ENST00000534313 K7EMT4 169 aa12.8□□□□□ -0.36
SIPA1-209ENST00000534313 SNRPD3P62318 126 aaKnown RBP12.8□□□□□ -0.36
SIPA1-209ENST00000534313 DEFB136Q30KP8 78 aa12.8□□□□□ -0.36
SIPA1-209ENST00000534313 C10orf126Q8N4M7 172 aa12.79□□□□□ -0.36
SIPA1-209ENST00000534313 CARD19Q96LW7 228 aa12.79□□□□□ -0.36
SIPA1-209ENST00000534313 FHL3Q13643 280 aa12.79□□□□□ -0.36
SIPA1-209ENST00000534313 TRBV7-9A0A0J9YWB2 115 aa12.79□□□□□ -0.36
SIPA1-209ENST00000534313 A0A0J9YY99 117 aa12.79□□□□□ -0.36
SIPA1-209ENST00000534313 BRI3O95415 125 aa12.79□□□□□ -0.36
SIPA1-209ENST00000534313 CFC1BP0CG36 223 aa12.79□□□□□ -0.36
SIPA1-209ENST00000534313 CFC1P0CG37 223 aa12.79□□□□□ -0.36
SIPA1-209ENST00000534313 P0DMU3 169 aa12.79□□□□□ -0.36
SIPA1-209ENST00000534313 FAM231AP0DMU4 169 aa12.79□□□□□ -0.36
SIPA1-209ENST00000534313 FAM231CP0DMU5 169 aa12.79□□□□□ -0.36
SIPA1-209ENST00000534313 ZNF876PQ49A33 203 aa12.79□□□□□ -0.36
SIPA1-209ENST00000534313 POM121L12Q8N7R1 296 aa12.79□□□□□ -0.36
SIPA1-209ENST00000534313 FBN2P35556 2912 aa12.79□□□□□ -0.36
SIPA1-209ENST00000534313 PAPPA-AS1Q5QFB9 102 aa12.78□□□□□ -0.36
SIPA1-209ENST00000534313 KNCNA6PVL3 124 aa12.78□□□□□ -0.36
SIPA1-209ENST00000534313 C18orf65Q6ZTR6 163 aa12.78□□□□□ -0.36
SIPA1-209ENST00000534313 M0QY20 66 aa12.78□□□□□ -0.36
SIPA1-209ENST00000534313 PROK1P58294 105 aa12.78□□□□□ -0.36
SIPA1-209ENST00000534313 DUX3Q96PT4 197 aa12.78□□□□□ -0.36
SIPA1-209ENST00000534313 SPXQ9BT56 116 aa12.78□□□□□ -0.36
SIPA1-209ENST00000534313 IGHV1OR15-1A0A075B7D0 117 aa12.77□□□□□ -0.36
SIPA1-209ENST00000534313 C9orf85Q96MD7 179 aa12.77□□□□□ -0.37
SIPA1-209ENST00000534313 K7EQG2 157 aa12.76□□□□□ -0.37
SIPA1-209ENST00000534313 ATP6V0E2Q8NHE4 81 aa12.76□□□□□ -0.37
SIPA1-209ENST00000534313 GAGE5Q13069 117 aa12.76□□□□□ -0.37
SIPA1-209ENST00000534313 GAGE6Q13070 117 aa12.76□□□□□ -0.37
SIPA1-209ENST00000534313 VCX2Q9H322 139 aa12.76□□□□□ -0.37
SIPA1-209ENST00000534313 ZNF580Q9UK33 172 aa12.76□□□□□ -0.37
SIPA1-209ENST00000534313 LGALS9O00182 355 aa12.76□□□□□ -0.37
SIPA1-209ENST00000534313 SONP18583 2426 aaKnown RBP12.76□□□□□ -0.37
SIPA1-209ENST00000534313 TRBV27A0A0K0K1C4 114 aa12.75□□□□□ -0.37
SIPA1-209ENST00000534313 RNASE13Q5GAN3 156 aaKnown RBP12.75□□□□□ -0.37
SIPA1-209ENST00000534313 C3orf56Q8N813 242 aa12.75□□□□□ -0.37
SIPA1-209ENST00000534313 TRAV8-4A0A0B4J246 113 aa12.75□□□□□ -0.37
SIPA1-209ENST00000534313 HOXD3P31249 432 aaPredicted RBP12.75□□□□□ -0.37
SIPA1-209ENST00000534313 UBE2D1P51668 147 aa12.75□□□□□ -0.37
SIPA1-209ENST00000534313 RBMY1A1P0DJD3 496 aaKnown RBP12.75□□□□□ -0.37
SIPA1-209ENST00000534313 RBMY1CP0DJD4 496 aa12.75□□□□□ -0.37
SIPA1-209ENST00000534313 RBMY1FQ15415 496 aaKnown RBP12.75□□□□□ -0.37
SIPA1-209ENST00000534313 ZNF462Q96JM2 2506 aa12.74□□□□□ -0.37
SIPA1-209ENST00000534313 A0A0U1RRA0 63 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms