RNA–Protein interactions for RNA: ENST00000534062.1

RTL1-201, Transcript of retrotransposon Gag like 1, humanhuman

APPRIS P1 BASIC

Gene RTL1, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL1-201ENST00000534062 PROK1P58294 105 aa7.22□□□□□ -1.25
RTL1-201ENST00000534062 FAM231DQ6ZW35 169 aa7.22□□□□□ -1.25
RTL1-201ENST00000534062 RNF152Q8N8N0 203 aa7.22□□□□□ -1.25
RTL1-201ENST00000534062 U3KQE9 123 aa7.22□□□□□ -1.25
RTL1-201ENST00000534062 NDUFA7O95182 113 aa7.21□□□□□ -1.25
RTL1-201ENST00000534062 ZNF256Q9Y2P7 627 aaPredicted RBP7.21□□□□□ -1.25
RTL1-201ENST00000534062 AGRNO00468 2067 aa7.21□□□□□ -1.25
RTL1-201ENST00000534062 A0A087WX48 190 aa7.21□□□□□ -1.26
RTL1-201ENST00000534062 A0A096LNJ9 63 aa7.21□□□□□ -1.26
RTL1-201ENST00000534062 EVI2AP22794 236 aa7.21□□□□□ -1.26
RTL1-201ENST00000534062 PPP1R17O96001 155 aa7.2□□□□□ -1.26
RTL1-201ENST00000534062 ARMS2P0C7Q2 107 aa7.2□□□□□ -1.26
RTL1-201ENST00000534062 HTN3P15516 51 aa7.2□□□□□ -1.26
RTL1-201ENST00000534062 SMCPP49901 116 aaPredicted RBP7.2□□□□□ -1.26
RTL1-201ENST00000534062 CACNG7P62955 275 aa7.2□□□□□ -1.26
RTL1-201ENST00000534062 LINC00322Q6ZN03 302 aaPredicted RBP7.2□□□□□ -1.26
RTL1-201ENST00000534062 TMEM61Q8N0U2 210 aa7.2□□□□□ -1.26
RTL1-201ENST00000534062 C20orf173Q96LM9 149 aa7.2□□□□□ -1.26
RTL1-201ENST00000534062 PPDPFQ9H3Y8 114 aa7.2□□□□□ -1.26
RTL1-201ENST00000534062 XCL2Q9UBD3 114 aa7.2□□□□□ -1.26
RTL1-201ENST00000534062 IGKV2D-26A0A0A0MRZ7 120 aa7.2□□□□□ -1.26
RTL1-201ENST00000534062 TRAV8-2A0A0B4J237 113 aa7.2□□□□□ -1.26
RTL1-201ENST00000534062 ZNF492Q9P255 531 aa7.2□□□□□ -1.26
RTL1-201ENST00000534062 KNCNA6PVL3 124 aa7.19□□□□□ -1.26
RTL1-201ENST00000534062 LGALS9O00182 355 aa7.19□□□□□ -1.26
RTL1-201ENST00000534062 ANK3Q12955 4377 aaKnown RBP7.19□□□□□ -1.26
RTL1-201ENST00000534062 TRAV12-2A0A075B6T6 113 aa7.19□□□□□ -1.26
RTL1-201ENST00000534062 M0QXV9 152 aa7.19□□□□□ -1.26
RTL1-201ENST00000534062 UBE2L6O14933 153 aa7.19□□□□□ -1.26
RTL1-201ENST00000534062 HERVK_113P61574 105 aa7.19□□□□□ -1.26
RTL1-201ENST00000534062 CHAC1Q9BUX1 264 aa7.19□□□□□ -1.26
RTL1-201ENST00000534062 AGPAT4-IT1Q9H0P7 198 aa7.19□□□□□ -1.26
RTL1-201ENST00000534062 TRBV20-1A0A075B6N2 111 aa7.19□□□□□ -1.26
RTL1-201ENST00000534062 D6R8Y8 96 aa7.19□□□□□ -1.26
RTL1-201ENST00000534062 INSP01308 110 aa7.19□□□□□ -1.26
RTL1-201ENST00000534062 C14orf178Q8N769 122 aaPredicted RBP7.19□□□□□ -1.26
RTL1-201ENST00000534062 COL6A5A8TX70 2615 aa7.19□□□□□ -1.26
RTL1-201ENST00000534062 SCGB1D4Q6XE38 83 aa7.18□□□□□ -1.26
RTL1-201ENST00000534062 AMN1Q8IY45 258 aa7.18□□□□□ -1.26
RTL1-201ENST00000534062 STAB1Q9NY15 2570 aa7.18□□□□□ -1.26
RTL1-201ENST00000534062 IGHV3-73A0A0B4J1V6 119 aa7.18□□□□□ -1.26
RTL1-201ENST00000534062 LGALS9BQ3B8N2 356 aa7.18□□□□□ -1.26
RTL1-201ENST00000534062 LGALS9CQ6DKI2 356 aa7.18□□□□□ -1.26
RTL1-201ENST00000534062 ZFAND6Q6FIF0 208 aa7.18□□□□□ -1.26
RTL1-201ENST00000534062 PTH2Q96A98 100 aa7.18□□□□□ -1.26
RTL1-201ENST00000534062 KLF12Q9Y4X4 402 aa7.18□□□□□ -1.26
RTL1-201ENST00000534062 TRGV1A0A0A0MS02 117 aa7.17□□□□□ -1.26
RTL1-201ENST00000534062 IGKV3OR2-268A0A0C4DH90 116 aa7.17□□□□□ -1.26
RTL1-201ENST00000534062 GAGE12JA6NER3 117 aa7.17□□□□□ -1.26
RTL1-201ENST00000534062 GAGE7O76087 117 aa7.17□□□□□ -1.26
RTL1-201ENST00000534062 GAGE12FP0CL80 117 aa7.17□□□□□ -1.26
RTL1-201ENST00000534062 GAGE12GP0CL81 117 aa7.17□□□□□ -1.26
RTL1-201ENST00000534062 GAGE12IP0CL82 117 aa7.17□□□□□ -1.26
RTL1-201ENST00000534062 GAGE4Q13068 117 aa7.17□□□□□ -1.26
RTL1-201ENST00000534062 CARD19Q96LW7 228 aa7.17□□□□□ -1.26
RTL1-201ENST00000534062 IGLV2-11P01706 119 aa7.17□□□□□ -1.26
RTL1-201ENST00000534062 KRTAP10-3P60369 221 aa7.17□□□□□ -1.26
RTL1-201ENST00000534062 ZNF415Q09FC8 603 aa7.17□□□□□ -1.26
RTL1-201ENST00000534062 CT83Q5H943 113 aa7.17□□□□□ -1.26
RTL1-201ENST00000534062 CEND1Q8N111 149 aa7.17□□□□□ -1.26
RTL1-201ENST00000534062 DEFB104AQ8WTQ1 72 aa7.17□□□□□ -1.26
RTL1-201ENST00000534062 DKK2Q9UBU2 259 aa7.17□□□□□ -1.26
RTL1-201ENST00000534062 NDUFA11Q86Y39 141 aa7.16□□□□□ -1.26
RTL1-201ENST00000534062 APRG1Q8IVJ8 170 aa7.16□□□□□ -1.26
RTL1-201ENST00000534062 GFRA4Q9GZZ7 299 aa7.16□□□□□ -1.26
RTL1-201ENST00000534062 TRGV4A0A0C4DH28 118 aa7.16□□□□□ -1.26
RTL1-201ENST00000534062 SMKR1H3BMG3 65 aa7.16□□□□□ -1.26
RTL1-201ENST00000534062 CFAP126Q5VTH2 177 aa7.16□□□□□ -1.26
RTL1-201ENST00000534062 DCANP1Q8TF63 244 aa7.16□□□□□ -1.26
RTL1-201ENST00000534062 SCGB3A1Q96QR1 104 aa7.16□□□□□ -1.26
RTL1-201ENST00000534062 A0A087WWL8 130 aa7.16□□□□□ -1.26
RTL1-201ENST00000534062 IGHV3-53P01767 116 aa7.16□□□□□ -1.26
RTL1-201ENST00000534062 IFI27P40305 119 aaPredicted RBP7.16□□□□□ -1.26
RTL1-201ENST00000534062 NXT2Q9NPJ8 142 aaKnown RBP7.16□□□□□ -1.26
RTL1-201ENST00000534062 TRBV25-1A0A075B6N4 114 aa7.16□□□□□ -1.26
RTL1-201ENST00000534062 DEFB114Q30KQ6 69 aa7.16□□□□□ -1.26
RTL1-201ENST00000534062 C12orf74Q32Q52 190 aa7.16□□□□□ -1.26
RTL1-201ENST00000534062 ZNF876PQ49A33 203 aa7.16□□□□□ -1.26
RTL1-201ENST00000534062 DPH3P1Q9H4G8 78 aa7.16□□□□□ -1.26
RTL1-201ENST00000534062 NDUFV3P56181 108 aaKnown RBP7.15□□□□□ -1.26
RTL1-201ENST00000534062 HIGD1BQ9P298 99 aa7.15□□□□□ -1.26
RTL1-201ENST00000534062 K7EQG2 157 aa7.15□□□□□ -1.26
RTL1-201ENST00000534062 ATP6V0E2Q8NHE4 81 aa7.15□□□□□ -1.26
RTL1-201ENST00000534062 TMEM262E9PQX1 116 aa7.15□□□□□ -1.27
RTL1-201ENST00000534062 ATP5LO75964 103 aa7.15□□□□□ -1.27
RTL1-201ENST00000534062 TENM1Q9UKZ4 2725 aa7.15□□□□□ -1.27
RTL1-201ENST00000534062 MLST8Q9BVC4 326 aa7.14□□□□□ -1.27
RTL1-201ENST00000534062 IGHV1OR15-1A0A075B7D0 117 aa7.14□□□□□ -1.27
RTL1-201ENST00000534062 HBDP02042 147 aa7.14□□□□□ -1.27
RTL1-201ENST00000534062 ZNF80P51504 273 aaPredicted RBP7.14□□□□□ -1.27
RTL1-201ENST00000534062 KRTAP24-1Q3LI83 254 aa7.14□□□□□ -1.27
RTL1-201ENST00000534062 DEFB121Q5J5C9 76 aa7.14□□□□□ -1.27
RTL1-201ENST00000534062 PAPPA-AS1Q5QFB9 102 aa7.14□□□□□ -1.27
RTL1-201ENST00000534062 MRPL53Q96EL3 112 aaKnown RBP7.14□□□□□ -1.27
RTL1-201ENST00000534062 SOCS3O14543 225 aa7.14□□□□□ -1.27
RTL1-201ENST00000534062 RHODO00212 210 aa7.13□□□□□ -1.27
RTL1-201ENST00000534062 SRSF9Q13242 221 aaKnown RBP eCLIP7.13□□□□□ -1.27
RTL1-201ENST00000534062 Q6ZQT7 251 aa7.13□□□□□ -1.27
RTL1-201ENST00000534062 RBAKDNA6NC62 111 aa7.12□□□□□ -1.27
RTL1-201ENST00000534062 CRIP1P50238 77 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms