RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	C16orf90	A8MZG2	172 aa		2.79	□□□□□ -1.96
ATM-223	ENST00000533979		K7EM74	188 aa		2.79	□□□□□ -1.96
ATM-223	ENST00000533979		M0R129	80 aa		2.79	□□□□□ -1.96
ATM-223	ENST00000533979	NDUFB3	O43676	98 aa		2.79	□□□□□ -1.96
ATM-223	ENST00000533979	ZNF73	O43830	326 aa	Predicted RBP	2.79	□□□□□ -1.96
ATM-223	ENST00000533979	CFD	P00746	253 aa	Predicted RBP	2.79	□□□□□ -1.96
ATM-223	ENST00000533979	MT-ATP8	P03928	68 aa		2.79	□□□□□ -1.96
ATM-223	ENST00000533979	TCRA	P04437	139 aa		2.79	□□□□□ -1.96
ATM-223	ENST00000533979	CCL3	P10147	92 aa		2.79	□□□□□ -1.96
ATM-223	ENST00000533979	CRYGA	P11844	174 aa		2.79	□□□□□ -1.96
ATM-223	ENST00000533979	LGALSL	Q3ZCW2	172 aa	Predicted RBP	2.79	□□□□□ -1.96
ATM-223	ENST00000533979	OR2T2	Q6IF00	324 aa		2.79	□□□□□ -1.96
ATM-223	ENST00000533979	HEPN1	Q6WQI6	88 aa		2.79	□□□□□ -1.96
ATM-223	ENST00000533979	LCA10	Q71F78	164 aa		2.79	□□□□□ -1.96
ATM-223	ENST00000533979	LYZL2	Q7Z4W2	148 aa		2.79	□□□□□ -1.96
ATM-223	ENST00000533979	DCANP1	Q8TF63	244 aa		2.79	□□□□□ -1.96
ATM-223	ENST00000533979	POP5	Q969H6	163 aa	Known RBP	2.79	□□□□□ -1.96
ATM-223	ENST00000533979	CHD3	Q12873	2000 aa	Known RBP	2.79	□□□□□ -1.96
ATM-223	ENST00000533979	MEGF8	Q7Z7M0	2845 aa		2.79	□□□□□ -1.96
ATM-223	ENST00000533979	CNTRL	Q7Z7A1	2325 aa		2.78	□□□□□ -1.96
ATM-223	ENST00000533979	IGKV1D-43	A0A0B4J1Z2	117 aa		2.78	□□□□□ -1.96
ATM-223	ENST00000533979	ZNF705F	A8MVS1	300 aa	Predicted RBP	2.78	□□□□□ -1.96
ATM-223	ENST00000533979		H3BQ85	93 aa		2.78	□□□□□ -1.96
ATM-223	ENST00000533979		M0R2P5	195 aa		2.78	□□□□□ -1.96
ATM-223	ENST00000533979	HIST1H2BK	O60814	126 aa		2.78	□□□□□ -1.96
ATM-223	ENST00000533979	NDUFB6	O95139	128 aa		2.78	□□□□□ -1.96
ATM-223	ENST00000533979	UBL3	O95164	117 aa		2.78	□□□□□ -1.96
ATM-223	ENST00000533979	NDUFB2	O95178	105 aa		2.78	□□□□□ -1.96
ATM-223	ENST00000533979	SFT2D2	O95562	160 aa		2.78	□□□□□ -1.96
ATM-223	ENST00000533979	HIST1H2BJ	P06899	126 aa		2.78	□□□□□ -1.96
ATM-223	ENST00000533979	PIRT	P0C851	137 aa		2.78	□□□□□ -1.96
ATM-223	ENST00000533979	ZNF705B	P0CI00	300 aa	Predicted RBP	2.78	□□□□□ -1.96
ATM-223	ENST00000533979	HLA-DRB4	P13762	266 aa		2.78	□□□□□ -1.96
ATM-223	ENST00000533979	SLC25A16	P16260	332 aa		2.78	□□□□□ -1.96
ATM-223	ENST00000533979	HIST1H2BO	P23527	126 aa		2.78	□□□□□ -1.96
ATM-223	ENST00000533979	HIST1H2BB	P33778	126 aa		2.78	□□□□□ -1.96
ATM-223	ENST00000533979	HIST1H2BD	P58876	126 aa		2.78	□□□□□ -1.96
ATM-223	ENST00000533979	HIST1H2BC	P62807	126 aa		2.78	□□□□□ -1.96
ATM-223	ENST00000533979	DYNLT1	P63172	113 aa		2.78	□□□□□ -1.96
ATM-223	ENST00000533979	CCL20	P78556	96 aa		2.78	□□□□□ -1.96
ATM-223	ENST00000533979	ADIRF	Q15847	76 aa		2.78	□□□□□ -1.96
ATM-223	ENST00000533979	HIST2H2BE	Q16778	126 aa		2.78	□□□□□ -1.96
ATM-223	ENST00000533979	LINC00483	Q53H64	154 aa		2.78	□□□□□ -1.96
ATM-223	ENST00000533979	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	2.78	□□□□□ -1.96
ATM-223	ENST00000533979	LINC01545	Q5VT33	79 aa		2.78	□□□□□ -1.96
ATM-223	ENST00000533979		Q6ZQT7	251 aa		2.78	□□□□□ -1.96
ATM-223	ENST00000533979	SLC25A26	Q70HW3	274 aa		2.78	□□□□□ -1.96
ATM-223	ENST00000533979	C10orf111	Q8N326	155 aa		2.78	□□□□□ -1.96
ATM-223	ENST00000533979	WFDC11	Q8NEX6	87 aa		2.78	□□□□□ -1.96
ATM-223	ENST00000533979	OR10P1	Q8NGE3	313 aa		2.78	□□□□□ -1.96
ATM-223	ENST00000533979	OR5C1	Q8NGR4	320 aa		2.78	□□□□□ -1.96
ATM-223	ENST00000533979	PATE1	Q8WXA2	126 aa		2.78	□□□□□ -1.96
ATM-223	ENST00000533979	HIST1H2BH	Q93079	126 aa		2.78	□□□□□ -1.96
ATM-223	ENST00000533979	HIST1H2BN	Q99877	126 aa		2.78	□□□□□ -1.96
ATM-223	ENST00000533979	HIST1H2BM	Q99879	126 aa		2.78	□□□□□ -1.96
ATM-223	ENST00000533979	TP73-AS1	Q9UF72	201 aa		2.78	□□□□□ -1.96
ATM-223	ENST00000533979	ZNF835	Q9Y2P0	537 aa		2.78	□□□□□ -1.96
ATM-223	ENST00000533979	HLA-DRB4	X5D2U9	266 aa		2.78	□□□□□ -1.96
ATM-223	ENST00000533979	HEATR5B	Q9P2D3	2071 aa		2.78	□□□□□ -1.96
ATM-223	ENST00000533979	MXRA5	Q9NR99	2828 aa		2.77	□□□□□ -1.97
ATM-223	ENST00000533979	TRBV20-1	A0A075B6N2	111 aa		2.77	□□□□□ -1.97
ATM-223	ENST00000533979	IGKV1D-37	A0A075B6S9	117 aa		2.77	□□□□□ -1.97
ATM-223	ENST00000533979	MUC21	A0A0G2JKD1	596 aa		2.77	□□□□□ -1.97
ATM-223	ENST00000533979	C7orf66	A4D0T2	115 aa		2.77	□□□□□ -1.97
ATM-223	ENST00000533979	OOSP1	A8MZH6	123 aa		2.77	□□□□□ -1.97
ATM-223	ENST00000533979		M0R378	163 aa		2.77	□□□□□ -1.97
ATM-223	ENST00000533979	PITX3	O75364	302 aa		2.77	□□□□□ -1.97
ATM-223	ENST00000533979	SNCG	O76070	127 aa		2.77	□□□□□ -1.97
ATM-223	ENST00000533979	IGHV3-53	P01767	116 aa		2.77	□□□□□ -1.97
ATM-223	ENST00000533979	GYPA	P02724	150 aa		2.77	□□□□□ -1.97
ATM-223	ENST00000533979	SHBG	P04278	402 aa		2.77	□□□□□ -1.97
ATM-223	ENST00000533979	SLC25A6	P12236	298 aa		2.77	□□□□□ -1.97
ATM-223	ENST00000533979	HINT1	P49773	126 aa	Predicted RBP	2.77	□□□□□ -1.97
ATM-223	ENST00000533979	KRTAP10-1	P60331	282 aa		2.77	□□□□□ -1.97
ATM-223	ENST00000533979	YPEL3	P61236	119 aa	Predicted RBP	2.77	□□□□□ -1.97
ATM-223	ENST00000533979	EBI3	Q14213	229 aa		2.77	□□□□□ -1.97
ATM-223	ENST00000533979		Q6ZS92	163 aa		2.77	□□□□□ -1.97
ATM-223	ENST00000533979	TEN1	Q86WV5	123 aa		2.77	□□□□□ -1.97
ATM-223	ENST00000533979	BPIFA4P	Q86YQ2	179 aa		2.77	□□□□□ -1.97
ATM-223	ENST00000533979	H1FX	Q92522	213 aa	Known RBP	2.77	□□□□□ -1.97
ATM-223	ENST00000533979	SERP1	Q9Y6X1	66 aa		2.77	□□□□□ -1.97
ATM-223	ENST00000533979	MAP1A	P78559	2803 aa	Predicted RBP	2.77	□□□□□ -1.97
ATM-223	ENST00000533979	CCDC88C	Q9P219	2028 aa		2.76	□□□□□ -1.97
ATM-223	ENST00000533979	IGHV3OR16-8	A0A075B7F1	116 aa		2.76	□□□□□ -1.97
ATM-223	ENST00000533979	TRBV27	A0A0K0K1C4	114 aa		2.76	□□□□□ -1.97
ATM-223	ENST00000533979	C19orf71	A6NCJ1	209 aa		2.76	□□□□□ -1.97
ATM-223	ENST00000533979	FAM24A	A6NFZ4	105 aa		2.76	□□□□□ -1.97
ATM-223	ENST00000533979	ZNF860	A6NHJ4	632 aa		2.76	□□□□□ -1.97
ATM-223	ENST00000533979	C17orf51	A8MQB3	221 aa		2.76	□□□□□ -1.97
ATM-223	ENST00000533979	MCRIP1	C9JLW8	97 aa		2.76	□□□□□ -1.97
ATM-223	ENST00000533979		H3BT86	120 aa		2.76	□□□□□ -1.97
ATM-223	ENST00000533979	SYNGR2	O43760	224 aa		2.76	□□□□□ -1.97
ATM-223	ENST00000533979	LY6H	O94772	140 aa		2.76	□□□□□ -1.97
ATM-223	ENST00000533979	IGKV1-5	P01602	117 aa		2.76	□□□□□ -1.97
ATM-223	ENST00000533979	PRM2	P04554	102 aa		2.76	□□□□□ -1.97
ATM-223	ENST00000533979	SLC25A5	P05141	298 aa	Known RBP	2.76	□□□□□ -1.97
ATM-223	ENST00000533979	CXCL1	P09341	107 aa		2.76	□□□□□ -1.97
ATM-223	ENST00000533979	IGLC2	P0DOY2	106 aa		2.76	□□□□□ -1.97
ATM-223	ENST00000533979	IGLC3	P0DOY3	106 aa		2.76	□□□□□ -1.97
ATM-223	ENST00000533979	SLC25A4	P12235	298 aa		2.76	□□□□□ -1.97

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