RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 GAGE12JA6NER3 117 aa8.28□□□□□ -1.08
COMMD9-208ENST00000533643 NCR2O95944 276 aa8.28□□□□□ -1.08
COMMD9-208ENST00000533643 NUDT3O95989 172 aa8.28□□□□□ -1.08
COMMD9-208ENST00000533643 LINC00694P0DN24 101 aa8.28□□□□□ -1.08
COMMD9-208ENST00000533643 GAGE1Q13065 139 aa8.28□□□□□ -1.08
COMMD9-208ENST00000533643 GAGE4Q13068 117 aa8.28□□□□□ -1.08
COMMD9-208ENST00000533643 GAGE5Q13069 117 aa8.28□□□□□ -1.08
COMMD9-208ENST00000533643 MRPL23Q16540 153 aaKnown RBP8.28□□□□□ -1.08
COMMD9-208ENST00000533643 COX19Q49B96 90 aa8.28□□□□□ -1.08
COMMD9-208ENST00000533643 GAGE13Q4V321 117 aa8.28□□□□□ -1.08
COMMD9-208ENST00000533643 CASC10Q5T4H9 136 aa8.28□□□□□ -1.08
COMMD9-208ENST00000533643 C15orf53Q8NAA6 179 aa8.28□□□□□ -1.08
COMMD9-208ENST00000533643 RPL39LQ96EH5 51 aaKnown RBP8.28□□□□□ -1.08
COMMD9-208ENST00000533643 APLNQ9ULZ1 77 aa8.28□□□□□ -1.08
COMMD9-208ENST00000533643 ICOSQ9Y6W8 199 aa8.28□□□□□ -1.08
COMMD9-208ENST00000533643 COLCA2A8K830 154 aa8.27□□□□□ -1.09
COMMD9-208ENST00000533643 HLA-DQA1P01909 254 aa8.27□□□□□ -1.09
COMMD9-208ENST00000533643 APCSP02743 223 aa8.27□□□□□ -1.09
COMMD9-208ENST00000533643 RPS10P46783 165 aaKnown RBP8.27□□□□□ -1.09
COMMD9-208ENST00000533643 ZNRF2Q8NHG8 242 aa8.27□□□□□ -1.09
COMMD9-208ENST00000533643 NIT2Q9NQR4 276 aa8.27□□□□□ -1.09
COMMD9-208ENST00000533643 TRBV7-3A0A075B6L6 115 aa8.26□□□□□ -1.09
COMMD9-208ENST00000533643 MT-ND6P03923 174 aa8.26□□□□□ -1.09
COMMD9-208ENST00000533643 SRIP30626 198 aa8.26□□□□□ -1.09
COMMD9-208ENST00000533643 CKS2P33552 79 aa8.26□□□□□ -1.09
COMMD9-208ENST00000533643 UBE2D3P61077 147 aa8.26□□□□□ -1.09
COMMD9-208ENST00000533643 UBE2D2P62837 147 aa8.26□□□□□ -1.09
COMMD9-208ENST00000533643 RPL36AP83881 106 aaKnown RBP8.26□□□□□ -1.09
COMMD9-208ENST00000533643 NRACQ8N912 160 aa8.26□□□□□ -1.09
COMMD9-208ENST00000533643 RPL36ALQ969Q0 106 aaKnown RBP8.26□□□□□ -1.09
COMMD9-208ENST00000533643 DNAJC30Q96LL9 226 aa8.26□□□□□ -1.09
COMMD9-208ENST00000533643 VPS13DQ5THJ4 4388 aa8.25□□□□□ -1.09
COMMD9-208ENST00000533643 D6R8Y8 96 aa8.25□□□□□ -1.09
COMMD9-208ENST00000533643 PPBPP02775 128 aa8.25□□□□□ -1.09
COMMD9-208ENST00000533643 TCTAP57738 103 aa8.25□□□□□ -1.09
COMMD9-208ENST00000533643 FABP9Q0Z7S8 132 aa8.25□□□□□ -1.09
COMMD9-208ENST00000533643 KIAA1644Q3SXP7 199 aa8.25□□□□□ -1.09
COMMD9-208ENST00000533643 OR10J3Q5JRS4 329 aa8.25□□□□□ -1.09
COMMD9-208ENST00000533643 NEGR1Q7Z3B1 354 aa8.25□□□□□ -1.09
COMMD9-208ENST00000533643 MRPL18Q9H0U6 180 aaKnown RBP8.25□□□□□ -1.09
COMMD9-208ENST00000533643 TRAPPC1Q9Y5R8 145 aa8.25□□□□□ -1.09
COMMD9-208ENST00000533643 TNFRSF18Q9Y5U5 241 aa8.25□□□□□ -1.09
COMMD9-208ENST00000533643 TRBV6-5A0A0K0K1A5 114 aa8.24□□□□□ -1.09
COMMD9-208ENST00000533643 SH2D6Q7Z4S9 175 aa8.24□□□□□ -1.09
COMMD9-208ENST00000533643 ORMDL3Q8N138 153 aa8.24□□□□□ -1.09
COMMD9-208ENST00000533643 ATP6V0E2Q8NHE4 81 aa8.24□□□□□ -1.09
COMMD9-208ENST00000533643 PRELID3AQ96N28 172 aa8.24□□□□□ -1.09
COMMD9-208ENST00000533643 DNAH1Q9P2D7 4330 aa8.23□□□□□ -1.09
COMMD9-208ENST00000533643 TNFRSF6BO95407 300 aa8.23□□□□□ -1.09
COMMD9-208ENST00000533643 PPP1R17O96001 155 aa8.23□□□□□ -1.09
COMMD9-208ENST00000533643 NPYP01303 97 aa8.23□□□□□ -1.09
COMMD9-208ENST00000533643 RAB5AP20339 215 aa8.23□□□□□ -1.09
COMMD9-208ENST00000533643 ESRGQ1W209 222 aa8.23□□□□□ -1.09
COMMD9-208ENST00000533643 LYPD5Q6UWN5 251 aa8.23□□□□□ -1.09
COMMD9-208ENST00000533643 ST20Q9HBF5 79 aa8.23□□□□□ -1.09
COMMD9-208ENST00000533643 IGHV3-38A0A0C4DH36 116 aa8.22□□□□□ -1.09
COMMD9-208ENST00000533643 SDHAF1A6NFY7 115 aa8.22□□□□□ -1.09
COMMD9-208ENST00000533643 PHOX2AO14813 284 aa8.22□□□□□ -1.09
COMMD9-208ENST00000533643 POLR2KP53803 58 aaKnown RBP8.22□□□□□ -1.09
COMMD9-208ENST00000533643 C20orf78Q9BR46 151 aa8.22□□□□□ -1.09
COMMD9-208ENST00000533643 ALKBH7Q9BT30 221 aaPredicted RBP8.22□□□□□ -1.09
COMMD9-208ENST00000533643 GTSF1LQ9H1H1 148 aa8.22□□□□□ -1.09
COMMD9-208ENST00000533643 ALMS1Q8TCU4 4167 aa8.21□□□□□ -1.09
COMMD9-208ENST00000533643 TIRAPP58753 221 aa8.21□□□□□ -1.1
COMMD9-208ENST00000533643 SUMO2P61956 95 aaKnown RBP8.21□□□□□ -1.1
COMMD9-208ENST00000533643 DAZ4Q86SG3 579 aaKnown RBP8.21□□□□□ -1.1
COMMD9-208ENST00000533643 TMEM70Q9BUB7 260 aa8.21□□□□□ -1.1
COMMD9-208ENST00000533643 DAZ3Q9NR90 486 aaKnown RBP8.21□□□□□ -1.1
COMMD9-208ENST00000533643 LAMTOR2Q9Y2Q5 125 aa8.21□□□□□ -1.1
COMMD9-208ENST00000533643 RPL32P62910 135 aaKnown RBP8.2□□□□□ -1.1
COMMD9-208ENST00000533643 DEFB104AQ8WTQ1 72 aa8.2□□□□□ -1.1
COMMD9-208ENST00000533643 TRBV27A0A0K0K1C4 114 aa8.19□□□□□ -1.1
COMMD9-208ENST00000533643 PRSS47A8MTI9 375 aa8.19□□□□□ -1.1
COMMD9-208ENST00000533643 I3L3M4 83 aa8.19□□□□□ -1.1
COMMD9-208ENST00000533643 VCYO14598 125 aa8.19□□□□□ -1.1
COMMD9-208ENST00000533643 TRGC2P03986 189 aa8.19□□□□□ -1.1
COMMD9-208ENST00000533643 PMCHP20382 165 aa8.19□□□□□ -1.1
COMMD9-208ENST00000533643 CCL18P55774 89 aa8.19□□□□□ -1.1
COMMD9-208ENST00000533643 NTM-AS1Q6ZSK4 140 aa8.19□□□□□ -1.1
COMMD9-208ENST00000533643 LINC00588Q9Y4M8 146 aa8.19□□□□□ -1.1
COMMD9-208ENST00000533643 LOC389332A0A1B0GUA5 103 aa8.18□□□□□ -1.1
COMMD9-208ENST00000533643 TSHBP01222 138 aa8.18□□□□□ -1.1
COMMD9-208ENST00000533643 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.18□□□□□ -1.1
COMMD9-208ENST00000533643 LYSTQ99698 3801 aa8.18□□□□□ -1.1
COMMD9-208ENST00000533643 SMIM2Q9BVW6 85 aa8.18□□□□□ -1.1
COMMD9-208ENST00000533643 MAP1LC3AQ9H492 121 aa8.18□□□□□ -1.1
COMMD9-208ENST00000533643 MRPS16Q9Y3D3 137 aaKnown RBP8.18□□□□□ -1.1
COMMD9-208ENST00000533643 IGLV2-18A0A075B6J9 118 aa8.17□□□□□ -1.1
COMMD9-208ENST00000533643 TRBV6-8A0A0A6YYG3 113 aa8.17□□□□□ -1.1
COMMD9-208ENST00000533643 COTL1Q14019 142 aa8.17□□□□□ -1.1
COMMD9-208ENST00000533643 TMEM97Q5BJF2 176 aa8.17□□□□□ -1.1
COMMD9-208ENST00000533643 LELP1Q5T871 98 aa8.17□□□□□ -1.1
COMMD9-208ENST00000533643 LGALS9CQ6DKI2 356 aa8.17□□□□□ -1.1
COMMD9-208ENST00000533643 UBE2DNLQ8IWF7 75 aa8.16□□□□□ -1.1
COMMD9-208ENST00000533643 Q8N8P6 123 aa8.16□□□□□ -1.1
COMMD9-208ENST00000533643 IGHV1-24A0A0C4DH33 117 aa8.15□□□□□ -1.1
COMMD9-208ENST00000533643 IFI27P40305 119 aaPredicted RBP8.15□□□□□ -1.1
COMMD9-208ENST00000533643 IQCJQ1A5X6 159 aa8.15□□□□□ -1.1
COMMD9-208ENST00000533643 C18orf32Q8TCD1 76 aa8.15□□□□□ -1.1
COMMD9-208ENST00000533643 KIR2DL4Q99706 377 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms