RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 CELSR3Q9NYQ7 3312 aa9.42□□□□□ -0.9
BDNF-218ENST00000533246 USP24Q9UPU5 2620 aa9.42□□□□□ -0.9
BDNF-218ENST00000533246 MALP21145 153 aa9.42□□□□□ -0.9
BDNF-218ENST00000533246 SLURP1P55000 103 aa9.42□□□□□ -0.9
BDNF-218ENST00000533246 Q6ZQT7 251 aa9.42□□□□□ -0.9
BDNF-218ENST00000533246 PRIMA1Q86XR5 153 aa9.42□□□□□ -0.9
BDNF-218ENST00000533246 TRAV8-3A0A0A6YYJ7 113 aa9.41□□□□□ -0.9
BDNF-218ENST00000533246 hADV29S1A0JD25 119 aa9.41□□□□□ -0.9
BDNF-218ENST00000533246 F8VRH5 84 aa9.41□□□□□ -0.9
BDNF-218ENST00000533246 M0R2P5 195 aa9.41□□□□□ -0.9
BDNF-218ENST00000533246 UQCRQO14949 82 aa9.41□□□□□ -0.9
BDNF-218ENST00000533246 C5orf56Q8N8D9 126 aa9.41□□□□□ -0.9
BDNF-218ENST00000533246 LY6G5BQ8NDX9 201 aa9.41□□□□□ -0.9
BDNF-218ENST00000533246 DPH3Q96FX2 82 aa9.41□□□□□ -0.9
BDNF-218ENST00000533246 TIMM21Q9BVV7 248 aa9.41□□□□□ -0.9
BDNF-218ENST00000533246 J3QLI3 93 aa9.41□□□□□ -0.9
BDNF-218ENST00000533246 ZNF80P51504 273 aaPredicted RBP9.41□□□□□ -0.9
BDNF-218ENST00000533246 LINC01559Q495D7 138 aa9.41□□□□□ -0.9
BDNF-218ENST00000533246 PAX4O43316 350 aa9.41□□□□□ -0.9
BDNF-218ENST00000533246 CDIP1Q9H305 208 aa9.41□□□□□ -0.9
BDNF-218ENST00000533246 A0A096LPF7 62 aa9.4□□□□□ -0.9
BDNF-218ENST00000533246 LINC01619G3V211 115 aa9.4□□□□□ -0.9
BDNF-218ENST00000533246 FGF6P10767 208 aa9.4□□□□□ -0.9
BDNF-218ENST00000533246 ZFP2Q6ZN57 461 aa9.4□□□□□ -0.9
BDNF-218ENST00000533246 TRPT1Q86TN4 253 aaKnown RBP9.4□□□□□ -0.9
BDNF-218ENST00000533246 TMEM190Q8WZ59 177 aa9.4□□□□□ -0.9
BDNF-218ENST00000533246 HIST2H2BDQ6DRA6 164 aa9.4□□□□□ -0.9
BDNF-218ENST00000533246 JPT2Q9H910 190 aa9.4□□□□□ -0.9
BDNF-218ENST00000533246 LRP4O75096 1905 aa9.4□□□□□ -0.91
BDNF-218ENST00000533246 TRANK1O15050 2925 aa9.4□□□□□ -0.91
BDNF-218ENST00000533246 LMO4P61968 165 aa9.4□□□□□ -0.91
BDNF-218ENST00000533246 C3orf22Q8N5N4 141 aa9.4□□□□□ -0.91
BDNF-218ENST00000533246 NDUFC2O95298 119 aa9.39□□□□□ -0.91
BDNF-218ENST00000533246 TAL2Q16559 108 aa9.39□□□□□ -0.91
BDNF-218ENST00000533246 C10orf105Q8TEF2 133 aa9.39□□□□□ -0.91
BDNF-218ENST00000533246 COPS9Q8WXC6 57 aa9.39□□□□□ -0.91
BDNF-218ENST00000533246 FREM2Q5SZK8 3169 aa9.39□□□□□ -0.91
BDNF-218ENST00000533246 WI2-2373I1.2A0A1W2PRP0 233 aa9.39□□□□□ -0.91
BDNF-218ENST00000533246 PLEKHB2Q96CS7 222 aa9.39□□□□□ -0.91
BDNF-218ENST00000533246 C6orf226Q5I0X4 101 aa9.39□□□□□ -0.91
BDNF-218ENST00000533246 LINC00574Q9H8X3 128 aa9.39□□□□□ -0.91
BDNF-218ENST00000533246 SIRPDQ9H106 197 aa9.38□□□□□ -0.91
BDNF-218ENST00000533246 INS-IGF2F8WCM5 200 aa9.38□□□□□ -0.91
BDNF-218ENST00000533246 A0A1B0GX51 115 aa9.38□□□□□ -0.91
BDNF-218ENST00000533246 C19orf71A6NCJ1 209 aa9.38□□□□□ -0.91
BDNF-218ENST00000533246 IGF1P05019 195 aa9.38□□□□□ -0.91
BDNF-218ENST00000533246 RBM3P98179 157 aaKnown RBP9.38□□□□□ -0.91
BDNF-218ENST00000533246 FBXL19-AS1Q494R0 122 aa9.37□□□□□ -0.91
BDNF-218ENST00000533246 RNF152Q8N8N0 203 aa9.37□□□□□ -0.91
BDNF-218ENST00000533246 VCANP13611 3396 aa9.37□□□□□ -0.91
BDNF-218ENST00000533246 PFN2P35080 140 aa9.37□□□□□ -0.91
BDNF-218ENST00000533246 RPL39P62891 51 aaKnown RBP9.37□□□□□ -0.91
BDNF-218ENST00000533246 DSCR8Q96T75 97 aa9.37□□□□□ -0.91
BDNF-218ENST00000533246 PRO1854Q9UHT4 67 aa9.37□□□□□ -0.91
BDNF-218ENST00000533246 I3L3M4 83 aa9.36□□□□□ -0.91
BDNF-218ENST00000533246 SZT2Q5T011 3432 aa9.36□□□□□ -0.91
BDNF-218ENST00000533246 FAM236DA0A1B0GTK5 79 aa9.36□□□□□ -0.91
BDNF-218ENST00000533246 FAM236CP0DP71 79 aa9.36□□□□□ -0.91
BDNF-218ENST00000533246 Q8N1Y9 231 aa9.36□□□□□ -0.91
BDNF-218ENST00000533246 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.36□□□□□ -0.91
BDNF-218ENST00000533246 IGKV2-29A2NJV5 120 aaPredicted RBP9.36□□□□□ -0.91
BDNF-218ENST00000533246 ELANEP08246 267 aa9.36□□□□□ -0.91
BDNF-218ENST00000533246 HIGD1BQ9P298 99 aa9.36□□□□□ -0.91
BDNF-218ENST00000533246 CCDC140Q96MF4 163 aa9.35□□□□□ -0.91
BDNF-218ENST00000533246 EDN2P20800 178 aa9.35□□□□□ -0.91
BDNF-218ENST00000533246 MLST8Q9BVC4 326 aa9.35□□□□□ -0.91
BDNF-218ENST00000533246 IGHV4OR15-8A0A075B7B6 117 aa9.34□□□□□ -0.91
BDNF-218ENST00000533246 A0A087WW49 117 aa9.34□□□□□ -0.91
BDNF-218ENST00000533246 RBAKDNA6NC62 111 aa9.34□□□□□ -0.91
BDNF-218ENST00000533246 LGALS1P09382 135 aaKnown RBP9.34□□□□□ -0.91
BDNF-218ENST00000533246 CFAP126Q5VTH2 177 aa9.34□□□□□ -0.91
BDNF-218ENST00000533246 CLPSL2Q6UWE3 100 aa9.34□□□□□ -0.91
BDNF-218ENST00000533246 NDUFA12Q9UI09 145 aa9.34□□□□□ -0.91
BDNF-218ENST00000533246 J3QQQ9 107 aa9.34□□□□□ -0.91
BDNF-218ENST00000533246 U3KQE9 123 aa9.34□□□□□ -0.91
BDNF-218ENST00000533246 TCL1BO95988 128 aa9.34□□□□□ -0.92
BDNF-218ENST00000533246 C10orf99Q6UWK7 81 aa9.34□□□□□ -0.92
BDNF-218ENST00000533246 NFE4Q86UQ8 179 aa9.34□□□□□ -0.92
BDNF-218ENST00000533246 AGRNO00468 2067 aa9.34□□□□□ -0.92
BDNF-218ENST00000533246 LAMA1P25391 3075 aa9.33□□□□□ -0.92
BDNF-218ENST00000533246 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.33□□□□□ -0.92
BDNF-218ENST00000533246 TEX49A0A1B0GTD5 131 aa9.33□□□□□ -0.92
BDNF-218ENST00000533246 CRLF1O75462 422 aa9.33□□□□□ -0.92
BDNF-218ENST00000533246 NXPH4O95158 308 aa9.33□□□□□ -0.92
BDNF-218ENST00000533246 C4orf26Q17RF5 130 aa9.33□□□□□ -0.92
BDNF-218ENST00000533246 MRPL53Q96EL3 112 aaKnown RBP9.33□□□□□ -0.92
BDNF-218ENST00000533246 NOP10Q9NPE3 64 aaKnown RBP9.33□□□□□ -0.92
BDNF-218ENST00000533246 MDFICQ9P1T7 246 aa9.33□□□□□ -0.92
BDNF-218ENST00000533246 A0A0J9YXV3 536 aa9.33□□□□□ -0.92
BDNF-218ENST00000533246 TMEM243Q9BU79 118 aa9.33□□□□□ -0.92
BDNF-218ENST00000533246 DNAH14Q0VDD8 3507 aa9.33□□□□□ -0.92
BDNF-218ENST00000533246 CRIP1P50238 77 aa9.33□□□□□ -0.92
BDNF-218ENST00000533246 RASL10AQ92737 203 aa9.33□□□□□ -0.92
BDNF-218ENST00000533246 SPANXDQ9BXN6 97 aa9.33□□□□□ -0.92
BDNF-218ENST00000533246 ATOX1O00244 68 aa9.32□□□□□ -0.92
BDNF-218ENST00000533246 ESM1Q9NQ30 184 aa9.32□□□□□ -0.92
BDNF-218ENST00000533246 ANKRD17O75179 2603 aaKnown RBP9.32□□□□□ -0.92
BDNF-218ENST00000533246 A0A1B0GXF2 115 aa9.32□□□□□ -0.92
BDNF-218ENST00000533246 SUMO4Q6EEV6 95 aa9.32□□□□□ -0.92
BDNF-218ENST00000533246 MBD6Q96DN6 1003 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms