RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 OR11H12B2RN74 326 aa11.26□□□□□ -0.61
CACNA1E-208ENST00000533229 SMIM13P0DJ93 91 aa11.26□□□□□ -0.61
CACNA1E-208ENST00000533229 Q6ZSV7 163 aa11.26□□□□□ -0.61
CACNA1E-208ENST00000533229 OR11H2Q8NH07 326 aa11.26□□□□□ -0.61
CACNA1E-208ENST00000533229 PHLDA1Q8WV24 401 aaPredicted RBP11.26□□□□□ -0.61
CACNA1E-208ENST00000533229 SPCS1Q9Y6A9 102 aa11.26□□□□□ -0.61
CACNA1E-208ENST00000533229 TENM4Q6N022 2769 aa11.25□□□□□ -0.61
CACNA1E-208ENST00000533229 MYMXA0A1B0GTQ4 84 aa11.25□□□□□ -0.61
CACNA1E-208ENST00000533229 C11orf86A6NJI1 115 aa11.25□□□□□ -0.61
CACNA1E-208ENST00000533229 A8MTW9 85 aa11.25□□□□□ -0.61
CACNA1E-208ENST00000533229 E9PLD3 99 aa11.25□□□□□ -0.61
CACNA1E-208ENST00000533229 RIPPLY3P57055 190 aa11.25□□□□□ -0.61
CACNA1E-208ENST00000533229 KLHL30-AS1Q8NEE0 82 aa11.25□□□□□ -0.61
CACNA1E-208ENST00000533229 PRADC1Q9BSG0 188 aa11.25□□□□□ -0.61
CACNA1E-208ENST00000533229 TRGV11A0A075B6L2 103 aa11.24□□□□□ -0.61
CACNA1E-208ENST00000533229 P0DMU3 169 aa11.24□□□□□ -0.61
CACNA1E-208ENST00000533229 FAM231AP0DMU4 169 aa11.24□□□□□ -0.61
CACNA1E-208ENST00000533229 FAM231CP0DMU5 169 aa11.24□□□□□ -0.61
CACNA1E-208ENST00000533229 PEMTQ9UBM1 199 aa11.24□□□□□ -0.61
CACNA1E-208ENST00000533229 NF1P21359 2839 aa11.24□□□□□ -0.61
CACNA1E-208ENST00000533229 NHP2Q9NX24 153 aaKnown RBP11.24□□□□□ -0.61
CACNA1E-208ENST00000533229 CCDC168Q8NDH2 2452 aa11.23□□□□□ -0.61
CACNA1E-208ENST00000533229 IGHV3-73A0A0B4J1V6 119 aa11.23□□□□□ -0.61
CACNA1E-208ENST00000533229 PROK1P58294 105 aa11.23□□□□□ -0.61
CACNA1E-208ENST00000533229 PMVKQ15126 192 aa11.23□□□□□ -0.61
CACNA1E-208ENST00000533229 TRPT1Q86TN4 253 aaKnown RBP11.23□□□□□ -0.61
CACNA1E-208ENST00000533229 TIMM17AQ99595 171 aa11.23□□□□□ -0.61
CACNA1E-208ENST00000533229 OPRPNQ99935 248 aaPredicted RBP11.23□□□□□ -0.61
CACNA1E-208ENST00000533229 MAP6D1Q9H9H5 199 aa11.23□□□□□ -0.61
CACNA1E-208ENST00000533229 DEFB114Q30KQ6 69 aa11.23□□□□□ -0.61
CACNA1E-208ENST00000533229 CD300EQ496F6 205 aaPredicted RBP11.23□□□□□ -0.61
CACNA1E-208ENST00000533229 SAMD5Q5TGI4 173 aa11.23□□□□□ -0.61
CACNA1E-208ENST00000533229 C11orf44Q8N8P7 122 aa11.23□□□□□ -0.61
CACNA1E-208ENST00000533229 TMEM141Q96I45 108 aa11.23□□□□□ -0.61
CACNA1E-208ENST00000533229 TRBV7-3A0A075B6L6 115 aa11.22□□□□□ -0.61
CACNA1E-208ENST00000533229 HIST1H4GQ99525 98 aa11.22□□□□□ -0.61
CACNA1E-208ENST00000533229 ESM1Q9NQ30 184 aa11.22□□□□□ -0.61
CACNA1E-208ENST00000533229 TRAV2A0A0B4J234 112 aa11.21□□□□□ -0.61
CACNA1E-208ENST00000533229 DNAJC9-AS1A6NH13 148 aa11.21□□□□□ -0.61
CACNA1E-208ENST00000533229 ZNRF2Q8NHG8 242 aa11.21□□□□□ -0.61
CACNA1E-208ENST00000533229 LINC01549A6NIU2 74 aa11.21□□□□□ -0.62
CACNA1E-208ENST00000533229 G3V4G9 280 aa11.21□□□□□ -0.62
CACNA1E-208ENST00000533229 FABP2P12104 132 aa11.21□□□□□ -0.62
CACNA1E-208ENST00000533229 TAL2Q16559 108 aa11.21□□□□□ -0.62
CACNA1E-208ENST00000533229 NSUN5P1Q3KNT7 163 aa11.21□□□□□ -0.62
CACNA1E-208ENST00000533229 Q9UF83 564 aa11.21□□□□□ -0.62
CACNA1E-208ENST00000533229 TMEM86BQ8N661 226 aa11.2□□□□□ -0.62
CACNA1E-208ENST00000533229 DYNLRB2Q8TF09 96 aa11.2□□□□□ -0.62
CACNA1E-208ENST00000533229 PLEKHB2Q96CS7 222 aa11.2□□□□□ -0.62
CACNA1E-208ENST00000533229 FLNAP21333 2647 aaKnown RBP11.2□□□□□ -0.62
CACNA1E-208ENST00000533229 OR5A1Q8NGJ0 315 aa11.2□□□□□ -0.62
CACNA1E-208ENST00000533229 RAX2Q96IS3 184 aa11.2□□□□□ -0.62
CACNA1E-208ENST00000533229 SPAG8Q99932 426 aaPredicted RBP11.2□□□□□ -0.62
CACNA1E-208ENST00000533229 ZNF815PA8K554 130 aa11.19□□□□□ -0.62
CACNA1E-208ENST00000533229 I3L3M4 83 aa11.19□□□□□ -0.62
CACNA1E-208ENST00000533229 C20orf203Q8NBC4 194 aa11.19□□□□□ -0.62
CACNA1E-208ENST00000533229 A0A1W2PRX2 142 aa11.18□□□□□ -0.62
CACNA1E-208ENST00000533229 RHOHQ15669 191 aa11.18□□□□□ -0.62
CACNA1E-208ENST00000533229 C12orf74Q32Q52 190 aa11.18□□□□□ -0.62
CACNA1E-208ENST00000533229 Q6ZSN1 163 aa11.18□□□□□ -0.62
CACNA1E-208ENST00000533229 TSPEAR-AS2P59090 65 aa11.17□□□□□ -0.62
CACNA1E-208ENST00000533229 PAPPA-AS1Q5QFB9 102 aa11.17□□□□□ -0.62
CACNA1E-208ENST00000533229 M0R2P5 195 aa11.17□□□□□ -0.62
CACNA1E-208ENST00000533229 ODF3L2Q3SX64 289 aa11.17□□□□□ -0.62
CACNA1E-208ENST00000533229 TMEM170BQ5T4T1 132 aa11.17□□□□□ -0.62
CACNA1E-208ENST00000533229 C11orf72Q8NBR9 251 aa11.17□□□□□ -0.62
CACNA1E-208ENST00000533229 PDZD2O15018 2839 aa11.16□□□□□ -0.62
CACNA1E-208ENST00000533229 IGLL5B9A064 214 aa11.16□□□□□ -0.62
CACNA1E-208ENST00000533229 CD28P10747 220 aa11.16□□□□□ -0.62
CACNA1E-208ENST00000533229 LINC01587Q99440 93 aa11.16□□□□□ -0.62
CACNA1E-208ENST00000533229 EDA2RQ9HAV5 297 aa11.16□□□□□ -0.62
CACNA1E-208ENST00000533229 NIPBLQ6KC79 2804 aaeCLIP11.16□□□□□ -0.62
CACNA1E-208ENST00000533229 KRTAP1-1Q07627 177 aa11.15□□□□□ -0.62
CACNA1E-208ENST00000533229 SCGB1D4Q6XE38 83 aa11.15□□□□□ -0.62
CACNA1E-208ENST00000533229 SCGB2A2Q13296 93 aa11.15□□□□□ -0.62
CACNA1E-208ENST00000533229 FHL3Q13643 280 aa11.15□□□□□ -0.62
CACNA1E-208ENST00000533229 CFAP126Q5VTH2 177 aa11.15□□□□□ -0.62
CACNA1E-208ENST00000533229 FAM104AQ969W3 186 aa11.15□□□□□ -0.62
CACNA1E-208ENST00000533229 ANK3Q12955 4377 aaKnown RBP11.14□□□□□ -0.63
CACNA1E-208ENST00000533229 IGLV4-3A0A075B6K6 122 aa11.14□□□□□ -0.63
CACNA1E-208ENST00000533229 A8MWV9 139 aa11.14□□□□□ -0.63
CACNA1E-208ENST00000533229 ZNF415Q09FC8 603 aa11.14□□□□□ -0.63
CACNA1E-208ENST00000533229 A0A1B0GWB2 263 aa11.14□□□□□ -0.63
CACNA1E-208ENST00000533229 AZU1P20160 251 aa11.14□□□□□ -0.63
CACNA1E-208ENST00000533229 NFE4Q86UQ8 179 aa11.14□□□□□ -0.63
CACNA1E-208ENST00000533229 XCL2Q9UBD3 114 aa11.14□□□□□ -0.63
CACNA1E-208ENST00000533229 ACANP16112 2415 aa11.13□□□□□ -0.63
CACNA1E-208ENST00000533229 TEX48A0A1B0GUV7 120 aa11.13□□□□□ -0.63
CACNA1E-208ENST00000533229 CCL24O00175 119 aa11.13□□□□□ -0.63
CACNA1E-208ENST00000533229 HERVK_113P61574 105 aa11.13□□□□□ -0.63
CACNA1E-208ENST00000533229 CEMP1Q6PRD7 247 aaPredicted RBP11.13□□□□□ -0.63
CACNA1E-208ENST00000533229 AMELXQ99217 191 aa11.13□□□□□ -0.63
CACNA1E-208ENST00000533229 CITED2Q99967 270 aaPredicted RBP11.13□□□□□ -0.63
CACNA1E-208ENST00000533229 MRPL16Q9NX20 251 aaKnown RBP11.13□□□□□ -0.63
CACNA1E-208ENST00000533229 SETD2Q9BYW2 2564 aaPredicted RBP11.13□□□□□ -0.63
CACNA1E-208ENST00000533229 A0A0J9YY99 117 aa11.12□□□□□ -0.63
CACNA1E-208ENST00000533229 WNK1Q9H4A3 2382 aa11.12□□□□□ -0.63
CACNA1E-208ENST00000533229 INSP01308 110 aa11.12□□□□□ -0.63
CACNA1E-208ENST00000533229 RPL24P83731 157 aaKnown RBP11.12□□□□□ -0.63
CACNA1E-208ENST00000533229 PIK3CD-AS1Q5SR53 167 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms