RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 SRIP30626 198 aa8.35□□□□□ -1.07
CAPN1-223ENST00000533079 HIST1H2BBP33778 126 aa8.35□□□□□ -1.07
CAPN1-223ENST00000533079 HIST1H2BDP58876 126 aa8.35□□□□□ -1.07
CAPN1-223ENST00000533079 HIST1H2BCP62807 126 aa8.35□□□□□ -1.07
CAPN1-223ENST00000533079 HIST2H2BEQ16778 126 aa8.35□□□□□ -1.07
CAPN1-223ENST00000533079 COA6Q5JTJ3 125 aaKnown RBP8.35□□□□□ -1.07
CAPN1-223ENST00000533079 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.35□□□□□ -1.07
CAPN1-223ENST00000533079 Q6ZSA8 131 aa8.35□□□□□ -1.07
CAPN1-223ENST00000533079 OR2D3Q8NGH3 330 aa8.35□□□□□ -1.07
CAPN1-223ENST00000533079 HIST1H2BHQ93079 126 aa8.35□□□□□ -1.07
CAPN1-223ENST00000533079 FAM19A4Q96LR4 140 aa8.35□□□□□ -1.07
CAPN1-223ENST00000533079 HIST1H2BNQ99877 126 aa8.35□□□□□ -1.07
CAPN1-223ENST00000533079 HIST1H2BMQ99879 126 aa8.35□□□□□ -1.07
CAPN1-223ENST00000533079 TRAPPC1Q9Y5R8 145 aa8.35□□□□□ -1.07
CAPN1-223ENST00000533079 A0A1B0GW15 77 aa8.34□□□□□ -1.07
CAPN1-223ENST00000533079 HIGD1CA8MV81 97 aa8.34□□□□□ -1.07
CAPN1-223ENST00000533079 SH2D1AO60880 128 aa8.34□□□□□ -1.07
CAPN1-223ENST00000533079 HLA-DQA1P01909 254 aa8.34□□□□□ -1.07
CAPN1-223ENST00000533079 ORM1P02763 201 aa8.34□□□□□ -1.07
CAPN1-223ENST00000533079 S100A6P06703 90 aa8.34□□□□□ -1.07
CAPN1-223ENST00000533079 GTSF1Q8WW33 167 aa8.34□□□□□ -1.07
CAPN1-223ENST00000533079 C8orf49Q96NF6 230 aa8.34□□□□□ -1.07
CAPN1-223ENST00000533079 A0A1B0GXF2 115 aa8.33□□□□□ -1.08
CAPN1-223ENST00000533079 KLLNB2CW77 178 aa8.33□□□□□ -1.08
CAPN1-223ENST00000533079 K7EQD1 137 aa8.33□□□□□ -1.08
CAPN1-223ENST00000533079 TRGC1P0CF51 173 aa8.33□□□□□ -1.08
CAPN1-223ENST00000533079 PRB4P10163 310 aaPredicted RBP8.33□□□□□ -1.08
CAPN1-223ENST00000533079 CRISP2P16562 243 aa8.33□□□□□ -1.08
CAPN1-223ENST00000533079 FABP9Q0Z7S8 132 aa8.33□□□□□ -1.08
CAPN1-223ENST00000533079 ERCC8Q13216 396 aa8.33□□□□□ -1.08
CAPN1-223ENST00000533079 LINC01559Q495D7 138 aa8.33□□□□□ -1.08
CAPN1-223ENST00000533079 ZFP82Q8N141 532 aa8.33□□□□□ -1.08
CAPN1-223ENST00000533079 GATD1Q8NB37 220 aa8.33□□□□□ -1.08
CAPN1-223ENST00000533079 FAM30AQ9NZY2 134 aa8.33□□□□□ -1.08
CAPN1-223ENST00000533079 IGHV3-53P01767 116 aa8.32□□□□□ -1.08
CAPN1-223ENST00000533079 ZNF415Q09FC8 603 aa8.32□□□□□ -1.08
CAPN1-223ENST00000533079 FHL2Q14192 279 aa8.32□□□□□ -1.08
CAPN1-223ENST00000533079 TMEM136Q6ZRR5 245 aa8.32□□□□□ -1.08
CAPN1-223ENST00000533079 Q8TAT8 98 aa8.32□□□□□ -1.08
CAPN1-223ENST00000533079 DNAH8Q96JB1 4490 aa8.31□□□□□ -1.08
CAPN1-223ENST00000533079 S100A8P05109 93 aa8.31□□□□□ -1.08
CAPN1-223ENST00000533079 ZNF80P51504 273 aaPredicted RBP8.31□□□□□ -1.08
CAPN1-223ENST00000533079 SNRPEP62304 92 aaKnown RBP8.31□□□□□ -1.08
CAPN1-223ENST00000533079 RIGQ13278 110 aa8.31□□□□□ -1.08
CAPN1-223ENST00000533079 SH2D6Q7Z4S9 175 aa8.31□□□□□ -1.08
CAPN1-223ENST00000533079 LRP1Q07954 4544 aaKnown RBP8.31□□□□□ -1.08
CAPN1-223ENST00000533079 TRGV4A0A0C4DH28 118 aa8.3□□□□□ -1.08
CAPN1-223ENST00000533079 IGHV3-38A0A0C4DH36 116 aa8.3□□□□□ -1.08
CAPN1-223ENST00000533079 A0A1B0GUT8 65 aa8.3□□□□□ -1.08
CAPN1-223ENST00000533079 F2Z2F3 143 aa8.3□□□□□ -1.08
CAPN1-223ENST00000533079 IGLC6P0CF74 106 aa8.3□□□□□ -1.08
CAPN1-223ENST00000533079 HBBP68871 147 aa8.3□□□□□ -1.08
CAPN1-223ENST00000533079 LINC01556Q5JQF7 62 aa8.3□□□□□ -1.08
CAPN1-223ENST00000533079 ZFAND2AQ8N6M9 145 aa8.3□□□□□ -1.08
CAPN1-223ENST00000533079 CNFNQ9BYD5 112 aa8.3□□□□□ -1.08
CAPN1-223ENST00000533079 MRPL18Q9H0U6 180 aaKnown RBP8.3□□□□□ -1.08
CAPN1-223ENST00000533079 MRPL16Q9NX20 251 aaKnown RBP8.3□□□□□ -1.08
CAPN1-223ENST00000533079 TRAV21A0A0B4J279 112 aa8.29□□□□□ -1.08
CAPN1-223ENST00000533079 IBA57-AS1B1ANH7 110 aa8.29□□□□□ -1.08
CAPN1-223ENST00000533079 GYPEP15421 78 aa8.29□□□□□ -1.08
CAPN1-223ENST00000533079 CTRLP40313 264 aa8.29□□□□□ -1.08
CAPN1-223ENST00000533079 NDUFA6P56556 154 aa8.29□□□□□ -1.08
CAPN1-223ENST00000533079 TIRAPP58753 221 aa8.29□□□□□ -1.08
CAPN1-223ENST00000533079 Q0VG73 95 aa8.29□□□□□ -1.08
CAPN1-223ENST00000533079 TDRG1Q3Y452 100 aa8.29□□□□□ -1.08
CAPN1-223ENST00000533079 MRPL54Q6P161 138 aaKnown RBP8.29□□□□□ -1.08
CAPN1-223ENST00000533079 PGLYRP4Q96LB8 373 aa8.29□□□□□ -1.08
CAPN1-223ENST00000533079 SSBP4Q9BWG4 385 aaPredicted RBP8.29□□□□□ -1.08
CAPN1-223ENST00000533079 APCSP02743 223 aa8.28□□□□□ -1.08
CAPN1-223ENST00000533079 LAGE3Q14657 143 aa8.28□□□□□ -1.08
CAPN1-223ENST00000533079 DNLZQ5SXM8 178 aa8.28□□□□□ -1.08
CAPN1-223ENST00000533079 BORCS7Q96B45 105 aa8.28□□□□□ -1.08
CAPN1-223ENST00000533079 FAT3Q8TDW7 4589 aa8.27□□□□□ -1.09
CAPN1-223ENST00000533079 IGHV1OR15-1A0A075B7D0 117 aa8.27□□□□□ -1.09
CAPN1-223ENST00000533079 IGKV3D-20A0A0C4DH25 116 aa8.27□□□□□ -1.09
CAPN1-223ENST00000533079 GPX1P07203 203 aa8.27□□□□□ -1.09
CAPN1-223ENST00000533079 GZMBP10144 247 aa8.27□□□□□ -1.09
CAPN1-223ENST00000533079 OR10J3Q5JRS4 329 aa8.27□□□□□ -1.09
CAPN1-223ENST00000533079 DMRTA1Q5VZB9 504 aa8.27□□□□□ -1.09
CAPN1-223ENST00000533079 OR5AL1P0C617 328 aa8.26□□□□□ -1.09
CAPN1-223ENST00000533079 ESDP10768 282 aa8.26□□□□□ -1.09
CAPN1-223ENST00000533079 RNASE4P34096 147 aaKnown RBP8.26□□□□□ -1.09
CAPN1-223ENST00000533079 LYZL1Q6UWQ5 148 aa8.26□□□□□ -1.09
CAPN1-223ENST00000533079 FER1L6-AS1Q8NA97 138 aa8.26□□□□□ -1.09
CAPN1-223ENST00000533079 TM2D2Q9BX73 214 aa8.26□□□□□ -1.09
CAPN1-223ENST00000533079 C11orf21Q9P2W6 132 aa8.26□□□□□ -1.09
CAPN1-223ENST00000533079 RS1O15537 224 aa8.25□□□□□ -1.09
CAPN1-223ENST00000533079 SNAI2O43623 268 aa8.25□□□□□ -1.09
CAPN1-223ENST00000533079 KRTAP10-4P60372 401 aaPredicted RBP8.25□□□□□ -1.09
CAPN1-223ENST00000533079 RAB4BP61018 213 aa8.25□□□□□ -1.09
CAPN1-223ENST00000533079 SCXQ7RTU7 201 aa8.25□□□□□ -1.09
CAPN1-223ENST00000533079 HIST3H2BBQ8N257 126 aa8.25□□□□□ -1.09
CAPN1-223ENST00000533079 RASL10AQ92737 203 aa8.25□□□□□ -1.09
CAPN1-223ENST00000533079 ZNF479Q96JC4 524 aa8.25□□□□□ -1.09
CAPN1-223ENST00000533079 PACRGQ96M98 296 aaPredicted RBP8.25□□□□□ -1.09
CAPN1-223ENST00000533079 Q9HAA7 133 aa8.25□□□□□ -1.09
CAPN1-223ENST00000533079 TP53TG3Q9ULZ0 132 aa8.25□□□□□ -1.09
CAPN1-223ENST00000533079 TRAV8-6A0A0B4J262 113 aa8.24□□□□□ -1.09
CAPN1-223ENST00000533079 ARMS2P0C7Q2 107 aa8.24□□□□□ -1.09
CAPN1-223ENST00000533079 CAMPP49913 170 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms