RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 CFC1BP0CG36 223 aa11.6□□□□□ -0.55
PCDHA3-202ENST00000532566 CFC1P0CG37 223 aa11.6□□□□□ -0.55
PCDHA3-202ENST00000532566 C16orf74Q96GX8 76 aa11.6□□□□□ -0.55
PCDHA3-202ENST00000532566 DSCAML1Q8TD84 2053 aa11.6□□□□□ -0.55
PCDHA3-202ENST00000532566 H3BMM0 161 aa11.6□□□□□ -0.55
PCDHA3-202ENST00000532566 UBE2WQ96B02 151 aa11.6□□□□□ -0.55
PCDHA3-202ENST00000532566 A0A096LPF7 62 aa11.6□□□□□ -0.55
PCDHA3-202ENST00000532566 IGLL5B9A064 214 aa11.6□□□□□ -0.55
PCDHA3-202ENST00000532566 Q9H8V8 135 aa11.6□□□□□ -0.55
PCDHA3-202ENST00000532566 TAX1BP3O14907 124 aa11.59□□□□□ -0.55
PCDHA3-202ENST00000532566 K7EQG2 157 aa11.59□□□□□ -0.55
PCDHA3-202ENST00000532566 C11orf86A6NJI1 115 aa11.59□□□□□ -0.55
PCDHA3-202ENST00000532566 K7EQD1 137 aa11.59□□□□□ -0.55
PCDHA3-202ENST00000532566 C20orf173Q96LM9 149 aa11.59□□□□□ -0.55
PCDHA3-202ENST00000532566 ODF3Q96PU9 254 aa11.58□□□□□ -0.56
PCDHA3-202ENST00000532566 ANGP03950 147 aaKnown RBP11.58□□□□□ -0.56
PCDHA3-202ENST00000532566 LAMTOR3Q9UHA4 124 aa11.58□□□□□ -0.56
PCDHA3-202ENST00000532566 PRSS47A8MTI9 375 aa11.58□□□□□ -0.56
PCDHA3-202ENST00000532566 NXPH4O95158 308 aa11.57□□□□□ -0.56
PCDHA3-202ENST00000532566 DAZ2Q13117 558 aaKnown RBP11.57□□□□□ -0.56
PCDHA3-202ENST00000532566 DAZ4Q86SG3 579 aaKnown RBP11.57□□□□□ -0.56
PCDHA3-202ENST00000532566 ZFAND2AQ8N6M9 145 aa11.57□□□□□ -0.56
PCDHA3-202ENST00000532566 DAZ3Q9NR90 486 aaKnown RBP11.57□□□□□ -0.56
PCDHA3-202ENST00000532566 Q6YL49 198 aa11.57□□□□□ -0.56
PCDHA3-202ENST00000532566 LRRC75A-AS1Q8N1F1 130 aa11.57□□□□□ -0.56
PCDHA3-202ENST00000532566 C20orf203Q8NBC4 194 aa11.57□□□□□ -0.56
PCDHA3-202ENST00000532566 PRRC2CQ9Y520 2896 aaKnown RBP11.57□□□□□ -0.56
PCDHA3-202ENST00000532566 LGALS9O00182 355 aa11.56□□□□□ -0.56
PCDHA3-202ENST00000532566 IGHV4-31P0DP07 118 aa11.56□□□□□ -0.56
PCDHA3-202ENST00000532566 TRBV7-3A0A075B6L6 115 aa11.56□□□□□ -0.56
PCDHA3-202ENST00000532566 ZNF561-AS1K7EIQ3 104 aa11.56□□□□□ -0.56
PCDHA3-202ENST00000532566 SLC25A29Q8N8R3 303 aa11.56□□□□□ -0.56
PCDHA3-202ENST00000532566 CITED2Q99967 270 aaPredicted RBP11.56□□□□□ -0.56
PCDHA3-202ENST00000532566 SETD2Q9BYW2 2564 aaPredicted RBP11.56□□□□□ -0.56
PCDHA3-202ENST00000532566 INAFM2P0DMQ5 153 aa11.56□□□□□ -0.56
PCDHA3-202ENST00000532566 TRAV13-2A0A0B4J235 113 aa11.55□□□□□ -0.56
PCDHA3-202ENST00000532566 C9orf66Q5T8R8 295 aa11.55□□□□□ -0.56
PCDHA3-202ENST00000532566 MAP6D1Q9H9H5 199 aa11.55□□□□□ -0.56
PCDHA3-202ENST00000532566 A4D1N5 150 aa11.55□□□□□ -0.56
PCDHA3-202ENST00000532566 DNAJC9-AS1A6NH13 148 aa11.55□□□□□ -0.56
PCDHA3-202ENST00000532566 CLPSL2Q6UWE3 100 aa11.55□□□□□ -0.56
PCDHA3-202ENST00000532566 IFITM1P13164 125 aa11.55□□□□□ -0.56
PCDHA3-202ENST00000532566 ABCA12Q86UK0 2595 aa11.55□□□□□ -0.56
PCDHA3-202ENST00000532566 A0A0J9YY99 117 aa11.54□□□□□ -0.56
PCDHA3-202ENST00000532566 HERV-K104P63124 156 aa11.54□□□□□ -0.56
PCDHA3-202ENST00000532566 GAGE2AQ6NT46 116 aa11.54□□□□□ -0.56
PCDHA3-202ENST00000532566 XCL1P47992 114 aa11.54□□□□□ -0.56
PCDHA3-202ENST00000532566 UBE2DNLQ8IWF7 75 aa11.53□□□□□ -0.56
PCDHA3-202ENST00000532566 U3KQK5 164 aa11.53□□□□□ -0.56
PCDHA3-202ENST00000532566 C5orf38Q86SI9 138 aa11.53□□□□□ -0.56
PCDHA3-202ENST00000532566 MUSTN1Q8IVN3 82 aa11.53□□□□□ -0.56
PCDHA3-202ENST00000532566 CARD19Q96LW7 228 aa11.53□□□□□ -0.56
PCDHA3-202ENST00000532566 ATP6V0E2Q8NHE4 81 aa11.52□□□□□ -0.56
PCDHA3-202ENST00000532566 RNF185Q96GF1 192 aa11.52□□□□□ -0.56
PCDHA3-202ENST00000532566 GYPEP15421 78 aa11.52□□□□□ -0.57
PCDHA3-202ENST00000532566 CHD7Q9P2D1 2997 aa11.52□□□□□ -0.57
PCDHA3-202ENST00000532566 PRRC2AP48634 2157 aaKnown RBP11.52□□□□□ -0.57
PCDHA3-202ENST00000532566 GAGE12HA6NDE8 117 aa11.52□□□□□ -0.57
PCDHA3-202ENST00000532566 C10orf99Q6UWK7 81 aa11.52□□□□□ -0.57
PCDHA3-202ENST00000532566 CLPSL1A2RUU4 121 aa11.51□□□□□ -0.57
PCDHA3-202ENST00000532566 NTN5Q8WTR8 489 aaPredicted RBP11.51□□□□□ -0.57
PCDHA3-202ENST00000532566 LRRK2Q5S007 2527 aa11.51□□□□□ -0.57
PCDHA3-202ENST00000532566 TEX48A0A1B0GUV7 120 aa11.5□□□□□ -0.57
PCDHA3-202ENST00000532566 PIFOQ8TCI5 191 aa11.5□□□□□ -0.57
PCDHA3-202ENST00000532566 TMEM263Q8WUH6 116 aaKnown RBP11.5□□□□□ -0.57
PCDHA3-202ENST00000532566 OPRPNQ99935 248 aaPredicted RBP11.5□□□□□ -0.57
PCDHA3-202ENST00000532566 ADAMTS20P59510 1910 aa11.5□□□□□ -0.57
PCDHA3-202ENST00000532566 PSMB8P28062 276 aa11.5□□□□□ -0.57
PCDHA3-202ENST00000532566 TRBV10-1A0A0K0K1A3 114 aa11.5□□□□□ -0.57
PCDHA3-202ENST00000532566 Q6ZQT7 251 aa11.49□□□□□ -0.57
PCDHA3-202ENST00000532566 SH2D6Q7Z4S9 175 aa11.49□□□□□ -0.57
PCDHA3-202ENST00000532566 WFDC11Q8NEX6 87 aa11.49□□□□□ -0.57
PCDHA3-202ENST00000532566 LINC00310P59036 64 aa11.49□□□□□ -0.57
PCDHA3-202ENST00000532566 HIST1H4AP62805 103 aaKnown RBP11.49□□□□□ -0.57
PCDHA3-202ENST00000532566 C11orf21Q9P2W6 132 aa11.49□□□□□ -0.57
PCDHA3-202ENST00000532566 MRPS12O15235 138 aaKnown RBP11.48□□□□□ -0.57
PCDHA3-202ENST00000532566 DEFB114Q30KQ6 69 aa11.48□□□□□ -0.57
PCDHA3-202ENST00000532566 VSIG2Q96IQ7 327 aa11.48□□□□□ -0.57
PCDHA3-202ENST00000532566 TP73-AS1Q9UF72 201 aa11.48□□□□□ -0.57
PCDHA3-202ENST00000532566 SOCS3O14543 225 aa11.48□□□□□ -0.57
PCDHA3-202ENST00000532566 ATP5G1P05496 136 aa11.48□□□□□ -0.57
PCDHA3-202ENST00000532566 A0A1W2PPR1 153 aa11.48□□□□□ -0.57
PCDHA3-202ENST00000532566 PSCAO43653 123 aa11.47□□□□□ -0.57
PCDHA3-202ENST00000532566 NEXN-AS1Q8NBZ9 246 aa11.47□□□□□ -0.57
PCDHA3-202ENST00000532566 SPART-AS1P0CW21 52 aa11.47□□□□□ -0.57
PCDHA3-202ENST00000532566 Q6ZS46 218 aa11.47□□□□□ -0.57
PCDHA3-202ENST00000532566 RNASE8Q8TDE3 154 aaKnown RBP11.47□□□□□ -0.57
PCDHA3-202ENST00000532566 HTTP42858 3142 aa11.46□□□□□ -0.57
PCDHA3-202ENST00000532566 IGHV1-58A0A0C4DH39 117 aa11.46□□□□□ -0.57
PCDHA3-202ENST00000532566 P0DMU3 169 aa11.46□□□□□ -0.57
PCDHA3-202ENST00000532566 FAM231AP0DMU4 169 aa11.46□□□□□ -0.57
PCDHA3-202ENST00000532566 FAM231CP0DMU5 169 aa11.46□□□□□ -0.57
PCDHA3-202ENST00000532566 TNRC6BQ9UPQ9 1833 aaKnown RBP11.46□□□□□ -0.57
PCDHA3-202ENST00000532566 IGLV1-40P01703 118 aa11.46□□□□□ -0.57
PCDHA3-202ENST00000532566 MRPL23Q16540 153 aaKnown RBP11.46□□□□□ -0.57
PCDHA3-202ENST00000532566 IGHV3-30-3P0DP02 117 aa11.46□□□□□ -0.58
PCDHA3-202ENST00000532566 PRR9Q5T870 116 aa11.46□□□□□ -0.58
PCDHA3-202ENST00000532566 CEMP1Q6PRD7 247 aaPredicted RBP11.46□□□□□ -0.58
PCDHA3-202ENST00000532566 HHLA3Q9XRX5 114 aa11.46□□□□□ -0.58
PCDHA3-202ENST00000532566 CRLF1O75462 422 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms