RNA–Protein interactions for RNA: ENST00000531326.1

PTPN11-204, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 4

Gene PTPN11, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-204ENST00000531326 MRPL23Q16540 153 aaKnown RBP12.21□□□□□ -0.45
PTPN11-204ENST00000531326 PRADC1Q9BSG0 188 aa12.21□□□□□ -0.45
PTPN11-204ENST00000531326 Q9UF83 564 aa12.21□□□□□ -0.45
PTPN11-204ENST00000531326 NAT8BQ9UHF3 227 aa12.21□□□□□ -0.45
PTPN11-204ENST00000531326 PPP1R2P9O14990 202 aa12.2□□□□□ -0.46
PTPN11-204ENST00000531326 SMIM17P0DL12 118 aa12.2□□□□□ -0.46
PTPN11-204ENST00000531326 RAB4BP61018 213 aa12.2□□□□□ -0.46
PTPN11-204ENST00000531326 CARHSP1Q9Y2V2 147 aaKnown RBP12.2□□□□□ -0.46
PTPN11-204ENST00000531326 A0A1B0GUT8 65 aa12.19□□□□□ -0.46
PTPN11-204ENST00000531326 MT-ND4LP03901 98 aa12.19□□□□□ -0.46
PTPN11-204ENST00000531326 LINC00694P0DN24 101 aa12.19□□□□□ -0.46
PTPN11-204ENST00000531326 ZNF56Q15929 161 aa12.19□□□□□ -0.46
PTPN11-204ENST00000531326 Q6ZRN7 208 aaPredicted RBP12.19□□□□□ -0.46
PTPN11-204ENST00000531326 ANAPC16Q96DE5 110 aa12.19□□□□□ -0.46
PTPN11-204ENST00000531326 SRIP30626 198 aa12.18□□□□□ -0.46
PTPN11-204ENST00000531326 BORCS7Q96B45 105 aa12.18□□□□□ -0.46
PTPN11-204ENST00000531326 DPH3P1Q9H4G8 78 aa12.18□□□□□ -0.46
PTPN11-204ENST00000531326 F5H697 171 aa12.17□□□□□ -0.46
PTPN11-204ENST00000531326 MGPP08493 103 aa12.17□□□□□ -0.46
PTPN11-204ENST00000531326 NEGR1Q7Z3B1 354 aa12.17□□□□□ -0.46
PTPN11-204ENST00000531326 TRBV10-1A0A0K0K1A3 114 aa12.16□□□□□ -0.46
PTPN11-204ENST00000531326 GAGE12JA6NER3 117 aa12.16□□□□□ -0.46
PTPN11-204ENST00000531326 GAGE1Q13065 139 aa12.16□□□□□ -0.46
PTPN11-204ENST00000531326 GAGE4Q13068 117 aa12.16□□□□□ -0.46
PTPN11-204ENST00000531326 GAGE5Q13069 117 aa12.16□□□□□ -0.46
PTPN11-204ENST00000531326 GAGE13Q4V321 117 aa12.16□□□□□ -0.46
PTPN11-204ENST00000531326 SUMO4Q6EEV6 95 aa12.16□□□□□ -0.46
PTPN11-204ENST00000531326 LYPD5Q6UWN5 251 aa12.16□□□□□ -0.46
PTPN11-204ENST00000531326 HERC1Q15751 4861 aa12.15□□□□□ -0.46
PTPN11-204ENST00000531326 RIGQ13278 110 aa12.15□□□□□ -0.46
PTPN11-204ENST00000531326 SH2D6Q7Z4S9 175 aa12.15□□□□□ -0.46
PTPN11-204ENST00000531326 M0QY20 66 aa12.14□□□□□ -0.47
PTPN11-204ENST00000531326 SIVA1O15304 175 aa12.14□□□□□ -0.47
PTPN11-204ENST00000531326 FUSP35637 526 aaKnown RBP eCLIP12.14□□□□□ -0.47
PTPN11-204ENST00000531326 SMIM15Q7Z3B0 74 aa12.14□□□□□ -0.47
PTPN11-204ENST00000531326 SLC7A5P1Q8MH63 180 aa12.14□□□□□ -0.47
PTPN11-204ENST00000531326 NEXN-AS1Q8NBZ9 246 aa12.14□□□□□ -0.47
PTPN11-204ENST00000531326 CLRN3Q8NCR9 226 aa12.13□□□□□ -0.47
PTPN11-204ENST00000531326 CTDSP1Q9GZU7 261 aa12.13□□□□□ -0.47
PTPN11-204ENST00000531326 TMEM191AQ9H0A3 160 aa12.13□□□□□ -0.47
PTPN11-204ENST00000531326 TNFRSF18Q9Y5U5 241 aa12.13□□□□□ -0.47
PTPN11-204ENST00000531326 A0A1B0GXF2 115 aa12.12□□□□□ -0.47
PTPN11-204ENST00000531326 C7orf77A4D0Y5 90 aa12.12□□□□□ -0.47
PTPN11-204ENST00000531326 TIRAPP58753 221 aa12.12□□□□□ -0.47
PTPN11-204ENST00000531326 ATP6V0E2Q8NHE4 81 aa12.12□□□□□ -0.47
PTPN11-204ENST00000531326 FAT1Q14517 4588 aa12.11□□□□□ -0.47
PTPN11-204ENST00000531326 TRBV7-3A0A075B6L6 115 aa12.11□□□□□ -0.47
PTPN11-204ENST00000531326 UBE2D3P61077 147 aa12.11□□□□□ -0.47
PTPN11-204ENST00000531326 UBE2D2P62837 147 aa12.11□□□□□ -0.47
PTPN11-204ENST00000531326 RPL36AP83881 106 aaKnown RBP12.11□□□□□ -0.47
PTPN11-204ENST00000531326 MRPL54Q6P161 138 aaKnown RBP12.11□□□□□ -0.47
PTPN11-204ENST00000531326 RPL36ALQ969Q0 106 aaKnown RBP12.11□□□□□ -0.47
PTPN11-204ENST00000531326 RNF185Q96GF1 192 aa12.11□□□□□ -0.47
PTPN11-204ENST00000531326 TRAV26-2A0A0B4J265 109 aa12.1□□□□□ -0.47
PTPN11-204ENST00000531326 A0A1B0GW15 77 aa12.1□□□□□ -0.47
PTPN11-204ENST00000531326 APOC3P02656 99 aa12.1□□□□□ -0.47
PTPN11-204ENST00000531326 CAMPP49913 170 aa12.1□□□□□ -0.47
PTPN11-204ENST00000531326 GATD1Q8NB37 220 aa12.1□□□□□ -0.47
PTPN11-204ENST00000531326 IMMP2LQ96T52 175 aa12.1□□□□□ -0.47
PTPN11-204ENST00000531326 GTSF1LQ9H1H1 148 aa12.1□□□□□ -0.47
PTPN11-204ENST00000531326 A0A087WWC5 75 aa12.09□□□□□ -0.47
PTPN11-204ENST00000531326 H7C1H1 209 aa12.09□□□□□ -0.47
PTPN11-204ENST00000531326 RAB4AP20338 218 aa12.09□□□□□ -0.47
PTPN11-204ENST00000531326 RHEBQ15382 184 aa12.09□□□□□ -0.47
PTPN11-204ENST00000531326 RASL11AQ6T310 242 aa12.09□□□□□ -0.47
PTPN11-204ENST00000531326 ATP5L2Q7Z4Y8 100 aa12.09□□□□□ -0.47
PTPN11-204ENST00000531326 AMN1Q8IY45 258 aa12.09□□□□□ -0.47
PTPN11-204ENST00000531326 PGPEP1Q9NXJ5 209 aa12.09□□□□□ -0.47
PTPN11-204ENST00000531326 EPM2AB3EWF7 344 aa12.08□□□□□ -0.48
PTPN11-204ENST00000531326 XGP55808 180 aa12.08□□□□□ -0.48
PTPN11-204ENST00000531326 HBBP68871 147 aa12.08□□□□□ -0.48
PTPN11-204ENST00000531326 NDUFA5Q16718 116 aa12.08□□□□□ -0.48
PTPN11-204ENST00000531326 DNAJC30Q96LL9 226 aa12.08□□□□□ -0.48
PTPN11-204ENST00000531326 TMEM242Q9NWH2 141 aa12.08□□□□□ -0.48
PTPN11-204ENST00000531326 GAS8-AS1O95177 125 aa12.07□□□□□ -0.48
PTPN11-204ENST00000531326 DNAH10OSP0CZ25 163 aa12.07□□□□□ -0.48
PTPN11-204ENST00000531326 SVBPQ8N300 66 aa12.07□□□□□ -0.48
PTPN11-204ENST00000531326 RPS10P5Q9NQ39 176 aa12.07□□□□□ -0.48
PTPN11-204ENST00000531326 NIT2Q9NQR4 276 aa12.07□□□□□ -0.48
PTPN11-204ENST00000531326 S100A8P05109 93 aa12.06□□□□□ -0.48
PTPN11-204ENST00000531326 LELP1Q5T871 98 aa12.06□□□□□ -0.48
PTPN11-204ENST00000531326 FAM104BQ5XKR9 115 aa12.06□□□□□ -0.48
PTPN11-204ENST00000531326 FRZBQ92765 325 aa12.06□□□□□ -0.48
PTPN11-204ENST00000531326 RPL39LQ96EH5 51 aaKnown RBP12.06□□□□□ -0.48
PTPN11-204ENST00000531326 BTF3L4Q96K17 158 aa12.06□□□□□ -0.48
PTPN11-204ENST00000531326 IGHV3-38A0A0C4DH36 116 aa12.05□□□□□ -0.48
PTPN11-204ENST00000531326 SNAPINO95295 136 aa12.05□□□□□ -0.48
PTPN11-204ENST00000531326 CDPF1Q6NVV7 123 aa12.05□□□□□ -0.48
PTPN11-204ENST00000531326 WFDC10BQ8IUB3 73 aa12.05□□□□□ -0.48
PTPN11-204ENST00000531326 A0A087WTM6 91 aa12.04□□□□□ -0.48
PTPN11-204ENST00000531326 EREGO14944 169 aa12.04□□□□□ -0.48
PTPN11-204ENST00000531326 KRTAP10-1P60331 282 aa12.04□□□□□ -0.48
PTPN11-204ENST00000531326 MRPL51Q4U2R6 128 aaKnown RBP12.04□□□□□ -0.48
PTPN11-204ENST00000531326 KCNIP4Q6PIL6 250 aa12.04□□□□□ -0.48
PTPN11-204ENST00000531326 MRAP2Q96G30 205 aa12.04□□□□□ -0.48
PTPN11-204ENST00000531326 TRAV9-1A0A075B6T8 112 aa12.03□□□□□ -0.48
PTPN11-204ENST00000531326 RPS10P46783 165 aaKnown RBP12.03□□□□□ -0.48
PTPN11-204ENST00000531326 DAZ4Q86SG3 579 aaKnown RBP12.03□□□□□ -0.48
PTPN11-204ENST00000531326 NFE4Q86UQ8 179 aa12.03□□□□□ -0.48
PTPN11-204ENST00000531326 DAZ3Q9NR90 486 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms