RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 BAALCQ8WXS3 180 aa14.74□□□□□ -0.05
TRAPPC4-210ENST00000531290 EIF5A2Q9GZV4 153 aaKnown RBP14.74□□□□□ -0.05
TRAPPC4-210ENST00000531290 KLK12Q9UKR0 248 aa14.74□□□□□ -0.05
TRAPPC4-210ENST00000531290 VPS13BQ7Z7G8 4022 aa14.74□□□□□ -0.05
TRAPPC4-210ENST00000531290 TRBV7-3A0A075B6L6 115 aa14.73□□□□□ -0.05
TRAPPC4-210ENST00000531290 TMEM250H0YL14 139 aa14.73□□□□□ -0.05
TRAPPC4-210ENST00000531290 IGLV2-8P01709 118 aa14.73□□□□□ -0.05
TRAPPC4-210ENST00000531290 OR5AL1P0C617 328 aa14.73□□□□□ -0.05
TRAPPC4-210ENST00000531290 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.72□□□□□ -0.05
TRAPPC4-210ENST00000531290 IGKV2D-24A0A075B6R9 120 aa14.72□□□□□ -0.05
TRAPPC4-210ENST00000531290 OR10AG1Q8NH19 301 aa14.72□□□□□ -0.05
TRAPPC4-210ENST00000531290 UBE2WQ96B02 151 aa14.72□□□□□ -0.05
TRAPPC4-210ENST00000531290 CHCHD7Q9BUK0 85 aa14.72□□□□□ -0.05
TRAPPC4-210ENST00000531290 TPPP3Q9BW30 176 aa14.72□□□□□ -0.05
TRAPPC4-210ENST00000531290 SSBP4Q9BWG4 385 aaPredicted RBP14.72□□□□□ -0.05
TRAPPC4-210ENST00000531290 TMEM262E9PQX1 116 aa14.71□□□□□ -0.05
TRAPPC4-210ENST00000531290 SNAI2O43623 268 aa14.71□□□□□ -0.05
TRAPPC4-210ENST00000531290 CEBPGP53567 150 aa14.71□□□□□ -0.05
TRAPPC4-210ENST00000531290 RAB4BP61018 213 aa14.71□□□□□ -0.05
TRAPPC4-210ENST00000531290 UBE2D3P61077 147 aa14.71□□□□□ -0.05
TRAPPC4-210ENST00000531290 SSTP61278 116 aa14.71□□□□□ -0.05
TRAPPC4-210ENST00000531290 UBE2D2P62837 147 aa14.71□□□□□ -0.05
TRAPPC4-210ENST00000531290 Q8N976 141 aa14.71□□□□□ -0.05
TRAPPC4-210ENST00000531290 TRBV20OR9-2A0A075B6H5 130 aa14.7□□□□□ -0.06
TRAPPC4-210ENST00000531290 C19orf71A6NCJ1 209 aa14.7□□□□□ -0.06
TRAPPC4-210ENST00000531290 SMIM17P0DL12 118 aa14.7□□□□□ -0.06
TRAPPC4-210ENST00000531290 ZNF56Q15929 161 aa14.7□□□□□ -0.06
TRAPPC4-210ENST00000531290 FER1L6-AS1Q8NA97 138 aa14.7□□□□□ -0.06
TRAPPC4-210ENST00000531290 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.69□□□□□ -0.06
TRAPPC4-210ENST00000531290 OR10G8Q8NGN5 311 aa14.69□□□□□ -0.06
TRAPPC4-210ENST00000531290 DNAJC30Q96LL9 226 aa14.69□□□□□ -0.06
TRAPPC4-210ENST00000531290 MUC21A0A0G2JKD1 596 aa14.68□□□□□ -0.06
TRAPPC4-210ENST00000531290 MUC21A0A140T8X8 626 aa14.68□□□□□ -0.06
TRAPPC4-210ENST00000531290 OCC1Q8TAD7 63 aa14.68□□□□□ -0.06
TRAPPC4-210ENST00000531290 TRBV6-8A0A0A6YYG3 113 aa14.67□□□□□ -0.06
TRAPPC4-210ENST00000531290 F2Z2F3 143 aa14.67□□□□□ -0.06
TRAPPC4-210ENST00000531290 Q0VG73 95 aa14.67□□□□□ -0.06
TRAPPC4-210ENST00000531290 SRRM2Q9UQ35 2752 aaKnown RBP14.67□□□□□ -0.06
TRAPPC4-210ENST00000531290 F5H697 171 aa14.66□□□□□ -0.06
TRAPPC4-210ENST00000531290 GZMBP10144 247 aa14.66□□□□□ -0.06
TRAPPC4-210ENST00000531290 CACNG7P62955 275 aa14.66□□□□□ -0.06
TRAPPC4-210ENST00000531290 Q6ZSA8 131 aa14.66□□□□□ -0.06
TRAPPC4-210ENST00000531290 NUDT10Q8NFP7 164 aa14.66□□□□□ -0.06
TRAPPC4-210ENST00000531290 NUDT11Q96G61 164 aa14.66□□□□□ -0.06
TRAPPC4-210ENST00000531290 FAM210AQ96ND0 272 aa14.66□□□□□ -0.06
TRAPPC4-210ENST00000531290 AP1S3Q96PC3 154 aa14.66□□□□□ -0.06
TRAPPC4-210ENST00000531290 NEXN-AS1Q8NBZ9 246 aa14.65□□□□□ -0.06
TRAPPC4-210ENST00000531290 MYCBP2O75592 4640 aa14.64□□□□□ -0.07
TRAPPC4-210ENST00000531290 NDUFS6O75380 124 aaKnown RBP14.64□□□□□ -0.07
TRAPPC4-210ENST00000531290 IGLC6P0CF74 106 aa14.64□□□□□ -0.07
TRAPPC4-210ENST00000531290 TEX261Q6UWH6 196 aa14.64□□□□□ -0.07
TRAPPC4-210ENST00000531290 RPP21Q9H633 154 aaKnown RBP14.64□□□□□ -0.07
TRAPPC4-210ENST00000531290 PLA2G1BP04054 148 aaKnown RBP14.63□□□□□ -0.07
TRAPPC4-210ENST00000531290 LINC01620Q4KN68 170 aa14.63□□□□□ -0.07
TRAPPC4-210ENST00000531290 ATRAIDQ6UW56 229 aa14.63□□□□□ -0.07
TRAPPC4-210ENST00000531290 SMIM7Q9BQ49 75 aa14.63□□□□□ -0.07
TRAPPC4-210ENST00000531290 C1orf43Q9BWL3 253 aa14.63□□□□□ -0.07
TRAPPC4-210ENST00000531290 DMBT1Q9UGM3 2413 aaPredicted RBP14.63□□□□□ -0.07
TRAPPC4-210ENST00000531290 CRPP02741 224 aa14.62□□□□□ -0.07
TRAPPC4-210ENST00000531290 PKIAP61925 76 aa14.62□□□□□ -0.07
TRAPPC4-210ENST00000531290 C15orf54Q8N8G6 183 aa14.62□□□□□ -0.07
TRAPPC4-210ENST00000531290 CHCHD5Q9BSY4 110 aa14.62□□□□□ -0.07
TRAPPC4-210ENST00000531290 RNASE7Q9H1E1 156 aaKnown RBP14.62□□□□□ -0.07
TRAPPC4-210ENST00000531290 ZNF727A8MUV8 499 aa14.61□□□□□ -0.07
TRAPPC4-210ENST00000531290 K7EN84 100 aa14.61□□□□□ -0.07
TRAPPC4-210ENST00000531290 TMEM97Q5BJF2 176 aa14.61□□□□□ -0.07
TRAPPC4-210ENST00000531290 LYZL1Q6UWQ5 148 aa14.61□□□□□ -0.07
TRAPPC4-210ENST00000531290 ANGP03950 147 aaKnown RBP14.6□□□□□ -0.07
TRAPPC4-210ENST00000531290 TRGC1P0CF51 173 aa14.6□□□□□ -0.07
TRAPPC4-210ENST00000531290 C14orf177Q52M58 125 aa14.6□□□□□ -0.07
TRAPPC4-210ENST00000531290 ENHOQ6UWT2 76 aa14.6□□□□□ -0.07
TRAPPC4-210ENST00000531290 LINC00528Q8N1L1 170 aa14.6□□□□□ -0.07
TRAPPC4-210ENST00000531290 GATCO43716 136 aaKnown RBP14.59□□□□□ -0.07
TRAPPC4-210ENST00000531290 MPV17L2Q567V2 206 aa14.59□□□□□ -0.07
TRAPPC4-210ENST00000531290 WDR73Q6P4I2 378 aa14.59□□□□□ -0.07
TRAPPC4-210ENST00000531290 MGPP08493 103 aa14.58□□□□□ -0.08
TRAPPC4-210ENST00000531290 SRP19P09132 144 aaKnown RBP14.58□□□□□ -0.08
TRAPPC4-210ENST00000531290 NTF3P20783 257 aa14.58□□□□□ -0.08
TRAPPC4-210ENST00000531290 PEA15Q15121 130 aa14.58□□□□□ -0.08
TRAPPC4-210ENST00000531290 KIF25-AS1Q9Y6Z4 181 aa14.58□□□□□ -0.08
TRAPPC4-210ENST00000531290 A8MWL6 223 aa14.57□□□□□ -0.08
TRAPPC4-210ENST00000531290 H7C1H1 209 aa14.57□□□□□ -0.08
TRAPPC4-210ENST00000531290 TWIST1Q15672 202 aa14.57□□□□□ -0.08
TRAPPC4-210ENST00000531290 FAM231DQ6ZW35 169 aa14.57□□□□□ -0.08
TRAPPC4-210ENST00000531290 J3QL48 77 aa14.56□□□□□ -0.08
TRAPPC4-210ENST00000531290 FAM74A3Q4VXF1 159 aa14.56□□□□□ -0.08
TRAPPC4-210ENST00000531290 SCXQ7RTU7 201 aa14.56□□□□□ -0.08
TRAPPC4-210ENST00000531290 SMIM15Q7Z3B0 74 aa14.56□□□□□ -0.08
TRAPPC4-210ENST00000531290 FLG2Q5D862 2391 aaPredicted RBP14.56□□□□□ -0.08
TRAPPC4-210ENST00000531290 CTRLP40313 264 aa14.55□□□□□ -0.08
TRAPPC4-210ENST00000531290 NTM-AS1Q6ZSK4 140 aa14.55□□□□□ -0.08
TRAPPC4-210ENST00000531290 CHAC1Q9BUX1 264 aa14.55□□□□□ -0.08
TRAPPC4-210ENST00000531290 TRBV25-1A0A075B6N4 114 aa14.54□□□□□ -0.08
TRAPPC4-210ENST00000531290 MIAQ16674 131 aa14.54□□□□□ -0.08
TRAPPC4-210ENST00000531290 LINC01551Q86U37 167 aa14.54□□□□□ -0.08
TRAPPC4-210ENST00000531290 BORCS7Q96B45 105 aa14.54□□□□□ -0.08
TRAPPC4-210ENST00000531290 DPH3P1Q9H4G8 78 aa14.54□□□□□ -0.08
TRAPPC4-210ENST00000531290 RAB14P61106 215 aa14.53□□□□□ -0.08
TRAPPC4-210ENST00000531290 GAGE6Q13070 117 aa14.53□□□□□ -0.08
TRAPPC4-210ENST00000531290 TMEM241Q24JQ0 296 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms