RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 TSPOP30536 169 aa6.37□□□□□ -1.39
CHMP4A-205ENST00000531158 URB1-AS1Q96HZ7 61 aa6.37□□□□□ -1.39
CHMP4A-205ENST00000531158 TMEM208Q9BTX3 173 aa6.37□□□□□ -1.39
CHMP4A-205ENST00000531158 SNHG12Q9BXW3 62 aa6.37□□□□□ -1.39
CHMP4A-205ENST00000531158 UQCR10Q9UDW1 63 aa6.37□□□□□ -1.39
CHMP4A-205ENST00000531158 PAM16Q9Y3D7 125 aa6.37□□□□□ -1.39
CHMP4A-205ENST00000531158 A0A1B0GV90 55 aa6.36□□□□□ -1.39
CHMP4A-205ENST00000531158 M0R3E3 92 aa6.36□□□□□ -1.39
CHMP4A-205ENST00000531158 INSP01308 110 aa6.36□□□□□ -1.39
CHMP4A-205ENST00000531158 FUSP35637 526 aaKnown RBP eCLIP6.36□□□□□ -1.39
CHMP4A-205ENST00000531158 SPATA45Q537H7 98 aa6.36□□□□□ -1.39
CHMP4A-205ENST00000531158 FAM19A2Q8N3H0 131 aa6.36□□□□□ -1.39
CHMP4A-205ENST00000531158 C16orf92Q96LL3 132 aa6.36□□□□□ -1.39
CHMP4A-205ENST00000531158 TMEM70Q9BUB7 260 aa6.36□□□□□ -1.39
CHMP4A-205ENST00000531158 HMCN2Q8NDA2 5059 aa6.35□□□□□ -1.39
CHMP4A-205ENST00000531158 IGHV1-24A0A0C4DH33 117 aa6.35□□□□□ -1.39
CHMP4A-205ENST00000531158 CBY3A6NI87 242 aa6.35□□□□□ -1.39
CHMP4A-205ENST00000531158 SH2D1AO60880 128 aa6.35□□□□□ -1.39
CHMP4A-205ENST00000531158 ATP5G1P05496 136 aa6.35□□□□□ -1.39
CHMP4A-205ENST00000531158 ARMS2P0C7Q2 107 aa6.35□□□□□ -1.39
CHMP4A-205ENST00000531158 IGLC3P0DOY3 106 aa6.35□□□□□ -1.39
CHMP4A-205ENST00000531158 CRIP1P50238 77 aa6.35□□□□□ -1.39
CHMP4A-205ENST00000531158 CCL18P55774 89 aa6.35□□□□□ -1.39
CHMP4A-205ENST00000531158 Q6ZRN7 208 aaPredicted RBP6.35□□□□□ -1.39
CHMP4A-205ENST00000531158 Q9H8V8 135 aa6.35□□□□□ -1.39
CHMP4A-205ENST00000531158 TRAV9-2A0A087WT02 112 aa6.34□□□□□ -1.39
CHMP4A-205ENST00000531158 IGKV2-40A0A087WW87 121 aaPredicted RBP6.34□□□□□ -1.39
CHMP4A-205ENST00000531158 LEPROTL1O95214 131 aa6.34□□□□□ -1.39
CHMP4A-205ENST00000531158 IGKV2D-40P01614 121 aaPredicted RBP6.34□□□□□ -1.39
CHMP4A-205ENST00000531158 LINC00614P0C842 121 aa6.34□□□□□ -1.39
CHMP4A-205ENST00000531158 IGLC6P0CF74 106 aa6.34□□□□□ -1.39
CHMP4A-205ENST00000531158 XGP55808 180 aa6.34□□□□□ -1.39
CHMP4A-205ENST00000531158 KIR3DS1Q14943 382 aa6.34□□□□□ -1.39
CHMP4A-205ENST00000531158 TDRG1Q3Y452 100 aa6.34□□□□□ -1.39
CHMP4A-205ENST00000531158 PET117Q6UWS5 81 aa6.34□□□□□ -1.39
CHMP4A-205ENST00000531158 LINC00612Q8N6U2 182 aa6.34□□□□□ -1.39
CHMP4A-205ENST00000531158 RNASE8Q8TDE3 154 aaKnown RBP6.34□□□□□ -1.39
CHMP4A-205ENST00000531158 C8orf49Q96NF6 230 aa6.34□□□□□ -1.39
CHMP4A-205ENST00000531158 CNFNQ9BYD5 112 aa6.34□□□□□ -1.39
CHMP4A-205ENST00000531158 PPP1R14DQ9NXH3 145 aa6.34□□□□□ -1.39
CHMP4A-205ENST00000531158 HSPB8Q9UJY1 196 aa6.34□□□□□ -1.39
CHMP4A-205ENST00000531158 TRAV26-1A0A087WT03 109 aa6.33□□□□□ -1.4
CHMP4A-205ENST00000531158 SYS1-DBNDD2H3BUS1 97 aa6.33□□□□□ -1.4
CHMP4A-205ENST00000531158 ESRGQ1W209 222 aa6.33□□□□□ -1.4
CHMP4A-205ENST00000531158 LINC01559Q495D7 138 aa6.33□□□□□ -1.4
CHMP4A-205ENST00000531158 SAMD13Q5VXD3 122 aa6.33□□□□□ -1.4
CHMP4A-205ENST00000531158 FER1L6-AS1Q8NA97 138 aa6.33□□□□□ -1.4
CHMP4A-205ENST00000531158 UPK3BQ9BT76 320 aa6.33□□□□□ -1.4
CHMP4A-205ENST00000531158 ST20Q9HBF5 79 aa6.33□□□□□ -1.4
CHMP4A-205ENST00000531158 AP5S1Q9NUS5 200 aa6.33□□□□□ -1.4
CHMP4A-205ENST00000531158 A0A0J9YY99 117 aa6.32□□□□□ -1.4
CHMP4A-205ENST00000531158 DUSP14O95147 198 aaKnown RBP6.32□□□□□ -1.4
CHMP4A-205ENST00000531158 HNRNPA3P51991 378 aaKnown RBP6.32□□□□□ -1.4
CHMP4A-205ENST00000531158 HIST1H1AQ02539 215 aaPredicted RBP6.32□□□□□ -1.4
CHMP4A-205ENST00000531158 SERTAD4-AS1Q5TG53 156 aa6.32□□□□□ -1.4
CHMP4A-205ENST00000531158 FAM104BQ5XKR9 115 aa6.32□□□□□ -1.4
CHMP4A-205ENST00000531158 LYZL1Q6UWQ5 148 aa6.32□□□□□ -1.4
CHMP4A-205ENST00000531158 ORMDL3Q8N138 153 aa6.32□□□□□ -1.4
CHMP4A-205ENST00000531158 SYT8Q8NBV8 401 aa6.32□□□□□ -1.4
CHMP4A-205ENST00000531158 OR10AG1Q8NH19 301 aa6.32□□□□□ -1.4
CHMP4A-205ENST00000531158 MAP1LC3CQ9BXW4 147 aa6.32□□□□□ -1.4
CHMP4A-205ENST00000531158 TMEM191AQ9H0A3 160 aa6.32□□□□□ -1.4
CHMP4A-205ENST00000531158 NOP10Q9NPE3 64 aaKnown RBP6.32□□□□□ -1.4
CHMP4A-205ENST00000531158 LAMTOR2Q9Y2Q5 125 aa6.32□□□□□ -1.4
CHMP4A-205ENST00000531158 MRPS16Q9Y3D3 137 aaKnown RBP6.32□□□□□ -1.4
CHMP4A-205ENST00000531158 LENEPQ9Y5L5 61 aa6.32□□□□□ -1.4
CHMP4A-205ENST00000531158 FABP5P3A8MUU1 101 aa6.31□□□□□ -1.4
CHMP4A-205ENST00000531158 PPBPP02775 128 aa6.31□□□□□ -1.4
CHMP4A-205ENST00000531158 HTN1P15515 57 aa6.31□□□□□ -1.4
CHMP4A-205ENST00000531158 LINC00315P59091 139 aa6.31□□□□□ -1.4
CHMP4A-205ENST00000531158 TTC32Q5I0X7 151 aa6.31□□□□□ -1.4
CHMP4A-205ENST00000531158 COL5A1-AS1Q5SY13 56 aa6.31□□□□□ -1.4
CHMP4A-205ENST00000531158 FA2HQ7L5A8 372 aa6.31□□□□□ -1.4
CHMP4A-205ENST00000531158 ZNF738Q8NE65 137 aa6.31□□□□□ -1.4
CHMP4A-205ENST00000531158 OR8A1Q8NGG7 326 aa6.31□□□□□ -1.4
CHMP4A-205ENST00000531158 TMEM263Q8WUH6 116 aaKnown RBP6.31□□□□□ -1.4
CHMP4A-205ENST00000531158 C16orf74Q96GX8 76 aa6.31□□□□□ -1.4
CHMP4A-205ENST00000531158 LINC01587Q99440 93 aa6.31□□□□□ -1.4
CHMP4A-205ENST00000531158 VGLL1Q99990 258 aa6.31□□□□□ -1.4
CHMP4A-205ENST00000531158 TCAPO15273 167 aa6.3□□□□□ -1.4
CHMP4A-205ENST00000531158 Q5VSD8 79 aa6.3□□□□□ -1.4
CHMP4A-205ENST00000531158 LINC01545Q5VT33 79 aa6.3□□□□□ -1.4
CHMP4A-205ENST00000531158 Q6ZN92 141 aa6.3□□□□□ -1.4
CHMP4A-205ENST00000531158 C9orf47Q6ZRZ4 202 aa6.3□□□□□ -1.4
CHMP4A-205ENST00000531158 Q8TAT8 98 aa6.3□□□□□ -1.4
CHMP4A-205ENST00000531158 VSIG2Q96IQ7 327 aa6.3□□□□□ -1.4
CHMP4A-205ENST00000531158 PRELID3AQ96N28 172 aa6.3□□□□□ -1.4
CHMP4A-205ENST00000531158 TPPP3Q9BW30 176 aa6.3□□□□□ -1.4
CHMP4A-205ENST00000531158 TIMM8BQ9Y5J9 83 aaPredicted RBP6.3□□□□□ -1.4
CHMP4A-205ENST00000531158 TNFRSF18Q9Y5U5 241 aa6.3□□□□□ -1.4
CHMP4A-205ENST00000531158 LINC01546A6NGU7 62 aa6.29□□□□□ -1.4
CHMP4A-205ENST00000531158 HSBP1L1C9JCN9 74 aa6.29□□□□□ -1.4
CHMP4A-205ENST00000531158 CDKN1BP46527 198 aa6.29□□□□□ -1.4
CHMP4A-205ENST00000531158 ZNF80P51504 273 aaPredicted RBP6.29□□□□□ -1.4
CHMP4A-205ENST00000531158 ZNF138P52744 262 aa6.29□□□□□ -1.4
CHMP4A-205ENST00000531158 KRTAP10-1P60331 282 aa6.29□□□□□ -1.4
CHMP4A-205ENST00000531158 GAGE1Q13065 139 aa6.29□□□□□ -1.4
CHMP4A-205ENST00000531158 MRPL51Q4U2R6 128 aaKnown RBP6.29□□□□□ -1.4
CHMP4A-205ENST00000531158 TMEM78Q5T7P6 136 aa6.29□□□□□ -1.4
CHMP4A-205ENST00000531158 PRSS3P2Q8NHM4 247 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms