RNA–Protein interactions for RNA: ENST00000530516.1

NUP98-218, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 391 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-218ENST00000530516 NDUFAF1Q9Y375 327 aa-0.43□□□□□ -2.48
NUP98-218ENST00000530516 UHRF1BP1LA0JNW5 1464 aa-0.43□□□□□ -2.48
NUP98-218ENST00000530516 DNAH10Q8IVF4 4471 aa-0.43□□□□□ -2.48
NUP98-218ENST00000530516 PLCE1Q9P212 2302 aa-0.43□□□□□ -2.48
NUP98-218ENST00000530516 PPRC1Q5VV67 1664 aaKnown RBP-0.43□□□□□ -2.48
NUP98-218ENST00000530516 PBRM1Q86U86 1689 aa-0.43□□□□□ -2.48
NUP98-218ENST00000530516 C2CD3Q4AC94 2353 aa-0.43□□□□□ -2.48
NUP98-218ENST00000530516 WNK1Q9H4A3 2382 aa-0.43□□□□□ -2.48
NUP98-218ENST00000530516 CSMD1Q96PZ7 3565 aa-0.44□□□□□ -2.48
NUP98-218ENST00000530516 NBEAQ8NFP9 2946 aa-0.44□□□□□ -2.48
NUP98-218ENST00000530516 PI4KAP42356 2102 aa-0.44□□□□□ -2.48
NUP98-218ENST00000530516 E5RI56 91 aa-0.44□□□□□ -2.48
NUP98-218ENST00000530516 SPRR2DP22532 72 aa-0.44□□□□□ -2.48
NUP98-218ENST00000530516 PSPHP78330 225 aa-0.44□□□□□ -2.48
NUP98-218ENST00000530516 KRTAP20-1Q3LI63 56 aa-0.44□□□□□ -2.48
NUP98-218ENST00000530516 HSD17B12Q53GQ0 312 aa-0.44□□□□□ -2.48
NUP98-218ENST00000530516 CYP2G1PQ6ZSU1 146 aa-0.44□□□□□ -2.48
NUP98-218ENST00000530516 SLC25A26Q70HW3 274 aa-0.44□□□□□ -2.48
NUP98-218ENST00000530516 SLC35B3Q9H1N7 401 aa-0.44□□□□□ -2.48
NUP98-218ENST00000530516 TRAPPC2LQ9UL33 140 aa-0.44□□□□□ -2.48
NUP98-218ENST00000530516 PLXNB2O15031 1838 aa-0.44□□□□□ -2.48
NUP98-218ENST00000530516 PCNX1Q96RV3 2341 aa-0.44□□□□□ -2.48
NUP98-218ENST00000530516 CFAP46Q8IYW2 2715 aa-0.44□□□□□ -2.48
NUP98-218ENST00000530516 UTP20O75691 2785 aaKnown RBP-0.45□□□□□ -2.48
NUP98-218ENST00000530516 LRRK2Q5S007 2527 aa-0.45□□□□□ -2.48
NUP98-218ENST00000530516 PTPRMP28827 1452 aa-0.45□□□□□ -2.48
NUP98-218ENST00000530516 SLC25A5P05141 298 aaKnown RBP-0.45□□□□□ -2.48
NUP98-218ENST00000530516 CCL3L1P16619 93 aa-0.45□□□□□ -2.48
NUP98-218ENST00000530516 RBM3P98179 157 aaKnown RBP-0.45□□□□□ -2.48
NUP98-218ENST00000530516 SSBP1Q04837 148 aaKnown RBP-0.45□□□□□ -2.48
NUP98-218ENST00000530516 OR8B8Q15620 311 aa-0.45□□□□□ -2.48
NUP98-218ENST00000530516 OR2T2Q6IF00 324 aa-0.45□□□□□ -2.48
NUP98-218ENST00000530516 SLC48A1Q6P1K1 146 aa-0.45□□□□□ -2.48
NUP98-218ENST00000530516 TOMM20LQ6UXN7 152 aa-0.45□□□□□ -2.48
NUP98-218ENST00000530516 OR9Q1Q8NGQ5 310 aa-0.45□□□□□ -2.48
NUP98-218ENST00000530516 CCDC115Q96NT0 180 aa-0.45□□□□□ -2.48
NUP98-218ENST00000530516 CYP4F30PQ9H0H9 118 aa-0.45□□□□□ -2.48
NUP98-218ENST00000530516 PCBD2Q9H0N5 130 aa-0.45□□□□□ -2.48
NUP98-218ENST00000530516 MUC22E2RYF6 1773 aaPredicted RBP-0.45□□□□□ -2.48
NUP98-218ENST00000530516 MYO15AQ9UKN7 3530 aa-0.46□□□□□ -2.48
NUP98-218ENST00000530516 ZFHX4Q86UP3 3567 aa-0.46□□□□□ -2.48
NUP98-218ENST00000530516 MYH6P13533 1939 aa-0.46□□□□□ -2.48
NUP98-218ENST00000530516 IFT172Q9UG01 1749 aa-0.46□□□□□ -2.48
NUP98-218ENST00000530516 KDM3BQ7LBC6 1761 aa-0.46□□□□□ -2.48
NUP98-218ENST00000530516 A0A087WTM6 91 aa-0.46□□□□□ -2.48
NUP98-218ENST00000530516 A0A1B0GW64 132 aa-0.46□□□□□ -2.48
NUP98-218ENST00000530516 TCRAP04437 139 aa-0.46□□□□□ -2.48
NUP98-218ENST00000530516 SPRR2BP35325 72 aa-0.46□□□□□ -2.48
NUP98-218ENST00000530516 FAM74A4Q5TZK3 123 aa-0.46□□□□□ -2.48
NUP98-218ENST00000530516 SCP2D1Q9UJQ7 156 aa-0.46□□□□□ -2.48
NUP98-218ENST00000530516 ERG28Q9UKR5 140 aa-0.46□□□□□ -2.48
NUP98-218ENST00000530516 CHD7Q9P2D1 2997 aa-0.46□□□□□ -2.48
NUP98-218ENST00000530516 OVOS2A0A0G2JMS6 1433 aa-0.47□□□□□ -2.48
NUP98-218ENST00000530516 SPTBN1Q01082 2364 aaKnown RBP-0.47□□□□□ -2.48
NUP98-218ENST00000530516 HTTP42858 3142 aa-0.47□□□□□ -2.48
NUP98-218ENST00000530516 RELNP78509 3460 aa-0.47□□□□□ -2.48
NUP98-218ENST00000530516 TRBV7-1A0A0A6YYK4 115 aa-0.47□□□□□ -2.48
NUP98-218ENST00000530516 TMEM14DPA8MWL7 114 aa-0.47□□□□□ -2.48
NUP98-218ENST00000530516 ACYP2P14621 99 aa-0.47□□□□□ -2.48
NUP98-218ENST00000530516 RPL7P18124 248 aaKnown RBP-0.47□□□□□ -2.48
NUP98-218ENST00000530516 SPRR2EP22531 72 aa-0.47□□□□□ -2.48
NUP98-218ENST00000530516 GCHFRP30047 84 aa-0.47□□□□□ -2.48
NUP98-218ENST00000530516 Q6ZRX8 168 aa-0.47□□□□□ -2.48
NUP98-218ENST00000530516 UBE2DNLQ8IWF7 75 aa-0.47□□□□□ -2.48
NUP98-218ENST00000530516 C4orf33Q8N1A6 199 aa-0.47□□□□□ -2.48
NUP98-218ENST00000530516 DYNLRB2Q8TF09 96 aa-0.47□□□□□ -2.48
NUP98-218ENST00000530516 CNFNQ9BYD5 112 aa-0.47□□□□□ -2.48
NUP98-218ENST00000530516 URB1O60287 2271 aaKnown RBP-0.47□□□□□ -2.48
NUP98-218ENST00000530516 CNOT1A5YKK6 2376 aaKnown RBP-0.47□□□□□ -2.49
NUP98-218ENST00000530516 PKD1L2Q7Z442 2459 aa-0.47□□□□□ -2.49
NUP98-218ENST00000530516 SPTBN5Q9NRC6 3674 aaKnown RBP-0.48□□□□□ -2.49
NUP98-218ENST00000530516 GOLGA3Q08378 1498 aa-0.48□□□□□ -2.49
NUP98-218ENST00000530516 ZZEF1O43149 2961 aa-0.48□□□□□ -2.49
NUP98-218ENST00000530516 KALRNO60229 2985 aa-0.48□□□□□ -2.49
NUP98-218ENST00000530516 CDK5RAP2Q96SN8 1893 aa-0.48□□□□□ -2.49
NUP98-218ENST00000530516 DMXL2Q8TDJ6 3036 aa-0.48□□□□□ -2.49
NUP98-218ENST00000530516 CCDC179H3BU77 68 aa-0.48□□□□□ -2.49
NUP98-218ENST00000530516 YPEL1O60688 119 aa-0.48□□□□□ -2.49
NUP98-218ENST00000530516 DPM2O94777 84 aa-0.48□□□□□ -2.49
NUP98-218ENST00000530516 RBP4P02753 201 aa-0.48□□□□□ -2.49
NUP98-218ENST00000530516 TFF1P04155 84 aa-0.48□□□□□ -2.49
NUP98-218ENST00000530516 WFDC2Q14508 124 aa-0.48□□□□□ -2.49
NUP98-218ENST00000530516 INSL4Q14641 139 aa-0.48□□□□□ -2.49
NUP98-218ENST00000530516 SAMD13Q5VXD3 122 aa-0.48□□□□□ -2.49
NUP98-218ENST00000530516 ATP6V0E2Q8NHE4 81 aa-0.48□□□□□ -2.49
NUP98-218ENST00000530516 COX7B2Q8TF08 81 aa-0.48□□□□□ -2.49
NUP98-218ENST00000530516 Q96NJ1 140 aa-0.48□□□□□ -2.49
NUP98-218ENST00000530516 V9GYV3 84 aa-0.48□□□□□ -2.49
NUP98-218ENST00000530516 EYSQ5T1H1 3165 aa-0.49□□□□□ -2.49
NUP98-218ENST00000530516 GVINP1Q7Z2Y8 2422 aa-0.49□□□□□ -2.49
NUP98-218ENST00000530516 BORCS7-ASMTA0A0B4J1R7 106 aa-0.49□□□□□ -2.49
NUP98-218ENST00000530516 A0A0D9SFI3 127 aa-0.49□□□□□ -2.49
NUP98-218ENST00000530516 A0A1B0GV72 72 aa-0.49□□□□□ -2.49
NUP98-218ENST00000530516 M0R3E3 92 aa-0.49□□□□□ -2.49
NUP98-218ENST00000530516 DEGS1O15121 323 aa-0.49□□□□□ -2.49
NUP98-218ENST00000530516 SLC25A6P12236 298 aa-0.49□□□□□ -2.49
NUP98-218ENST00000530516 SPRR2AP35326 72 aa-0.49□□□□□ -2.49
NUP98-218ENST00000530516 DEFB109BQ30KR1 87 aa-0.49□□□□□ -2.49
NUP98-218ENST00000530516 KRTAP6-2Q3LI66 62 aa-0.49□□□□□ -2.49
NUP98-218ENST00000530516 TMEM91Q6ZNR0 172 aa-0.49□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms