RNA–Protein interactions for RNA: ENST00000529714.5

SMCO4-205, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 3

Gene SMCO4, Length 355 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-205ENST00000529714 NIT2Q9NQR4 276 aa9.51□□□□□ -0.89
SMCO4-205ENST00000529714 TRBV7-3A0A075B6L6 115 aa9.5□□□□□ -0.89
SMCO4-205ENST00000529714 RPL36AP83881 106 aaKnown RBP9.5□□□□□ -0.89
SMCO4-205ENST00000529714 NEXN-AS1Q8NBZ9 246 aa9.5□□□□□ -0.89
SMCO4-205ENST00000529714 RPL36ALQ969Q0 106 aaKnown RBP9.5□□□□□ -0.89
SMCO4-205ENST00000529714 A0A096LPF7 62 aa9.49□□□□□ -0.89
SMCO4-205ENST00000529714 TRAV26-2A0A0B4J265 109 aa9.49□□□□□ -0.89
SMCO4-205ENST00000529714 TRBV6-5A0A0K0K1A5 114 aa9.49□□□□□ -0.89
SMCO4-205ENST00000529714 LOC100131303A0A0U1RQF7 123 aa9.49□□□□□ -0.89
SMCO4-205ENST00000529714 SCO1O75880 301 aa9.49□□□□□ -0.89
SMCO4-205ENST00000529714 P0DMU3 169 aa9.49□□□□□ -0.89
SMCO4-205ENST00000529714 FAM231AP0DMU4 169 aa9.49□□□□□ -0.89
SMCO4-205ENST00000529714 FAM231CP0DMU5 169 aa9.49□□□□□ -0.89
SMCO4-205ENST00000529714 SRIP30626 198 aa9.49□□□□□ -0.89
SMCO4-205ENST00000529714 CKS2P33552 79 aa9.49□□□□□ -0.89
SMCO4-205ENST00000529714 CASC10Q5T4H9 136 aa9.49□□□□□ -0.89
SMCO4-205ENST00000529714 Q9UF83 564 aa9.49□□□□□ -0.89
SMCO4-205ENST00000529714 APLNQ9ULZ1 77 aa9.49□□□□□ -0.89
SMCO4-205ENST00000529714 GAGE12JA6NER3 117 aa9.48□□□□□ -0.89
SMCO4-205ENST00000529714 COLCA2A8K830 154 aa9.48□□□□□ -0.89
SMCO4-205ENST00000529714 NUDT3O95989 172 aa9.48□□□□□ -0.89
SMCO4-205ENST00000529714 APCSP02743 223 aa9.48□□□□□ -0.89
SMCO4-205ENST00000529714 UBE2D3P61077 147 aa9.48□□□□□ -0.89
SMCO4-205ENST00000529714 UBE2D2P62837 147 aa9.48□□□□□ -0.89
SMCO4-205ENST00000529714 GAGE1Q13065 139 aa9.48□□□□□ -0.89
SMCO4-205ENST00000529714 GAGE4Q13068 117 aa9.48□□□□□ -0.89
SMCO4-205ENST00000529714 GAGE5Q13069 117 aa9.48□□□□□ -0.89
SMCO4-205ENST00000529714 GAGE13Q4V321 117 aa9.48□□□□□ -0.89
SMCO4-205ENST00000529714 NEGR1Q7Z3B1 354 aa9.48□□□□□ -0.89
SMCO4-205ENST00000529714 ORMDL3Q8N138 153 aa9.48□□□□□ -0.89
SMCO4-205ENST00000529714 ZNRF2Q8NHG8 242 aa9.48□□□□□ -0.89
SMCO4-205ENST00000529714 LAMTOR2Q9Y2Q5 125 aa9.48□□□□□ -0.89
SMCO4-205ENST00000529714 TNFRSF18Q9Y5U5 241 aa9.48□□□□□ -0.89
SMCO4-205ENST00000529714 D6R8Y8 96 aa9.47□□□□□ -0.89
SMCO4-205ENST00000529714 PHOX2AO14813 284 aa9.47□□□□□ -0.89
SMCO4-205ENST00000529714 OR10J3Q5JRS4 329 aa9.47□□□□□ -0.89
SMCO4-205ENST00000529714 NRACQ8N912 160 aa9.47□□□□□ -0.89
SMCO4-205ENST00000529714 RPL39LQ96EH5 51 aaKnown RBP9.47□□□□□ -0.89
SMCO4-205ENST00000529714 MRPL18Q9H0U6 180 aaKnown RBP9.47□□□□□ -0.89
SMCO4-205ENST00000529714 SMKR1H3BMG3 65 aa9.46□□□□□ -0.9
SMCO4-205ENST00000529714 GAS8-AS1O95177 125 aa9.46□□□□□ -0.9
SMCO4-205ENST00000529714 NCR2O95944 276 aa9.46□□□□□ -0.9
SMCO4-205ENST00000529714 RPS10P46783 165 aaKnown RBP9.46□□□□□ -0.9
SMCO4-205ENST00000529714 TIRAPP58753 221 aa9.46□□□□□ -0.9
SMCO4-205ENST00000529714 DAZ4Q86SG3 579 aaKnown RBP9.46□□□□□ -0.9
SMCO4-205ENST00000529714 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.46□□□□□ -0.9
SMCO4-205ENST00000529714 ATP6V0E2Q8NHE4 81 aa9.46□□□□□ -0.9
SMCO4-205ENST00000529714 C20orf78Q9BR46 151 aa9.46□□□□□ -0.9
SMCO4-205ENST00000529714 DAZ3Q9NR90 486 aaKnown RBP9.46□□□□□ -0.9
SMCO4-205ENST00000529714 TRAPPC1Q9Y5R8 145 aa9.46□□□□□ -0.9
SMCO4-205ENST00000529714 TNFRSF6BO95407 300 aa9.45□□□□□ -0.9
SMCO4-205ENST00000529714 RAB5AP20339 215 aa9.45□□□□□ -0.9
SMCO4-205ENST00000529714 RPL32P62910 135 aaKnown RBP9.45□□□□□ -0.9
SMCO4-205ENST00000529714 FABP9Q0Z7S8 132 aa9.45□□□□□ -0.9
SMCO4-205ENST00000529714 PRELID3AQ96N28 172 aa9.45□□□□□ -0.9
SMCO4-205ENST00000529714 ST20Q9HBF5 79 aa9.45□□□□□ -0.9
SMCO4-205ENST00000529714 TENM2Q9NT68 2774 aa9.44□□□□□ -0.9
SMCO4-205ENST00000529714 SDHAF1A6NFY7 115 aa9.44□□□□□ -0.9
SMCO4-205ENST00000529714 SUMO2P61956 95 aaKnown RBP9.44□□□□□ -0.9
SMCO4-205ENST00000529714 TMEM97Q5BJF2 176 aa9.44□□□□□ -0.9
SMCO4-205ENST00000529714 TMEM70Q9BUB7 260 aa9.44□□□□□ -0.9
SMCO4-205ENST00000529714 GTSF1LQ9H1H1 148 aa9.44□□□□□ -0.9
SMCO4-205ENST00000529714 TRBV27A0A0K0K1C4 114 aa9.43□□□□□ -0.9
SMCO4-205ENST00000529714 NPYP01303 97 aa9.43□□□□□ -0.9
SMCO4-205ENST00000529714 POLR2KP53803 58 aaKnown RBP9.43□□□□□ -0.9
SMCO4-205ENST00000529714 LYPD5Q6UWN5 251 aa9.43□□□□□ -0.9
SMCO4-205ENST00000529714 PRSS47A8MTI9 375 aa9.42□□□□□ -0.9
SMCO4-205ENST00000529714 CCL18P55774 89 aa9.42□□□□□ -0.9
SMCO4-205ENST00000529714 KIAA1644Q3SXP7 199 aa9.42□□□□□ -0.9
SMCO4-205ENST00000529714 ALKBH7Q9BT30 221 aaPredicted RBP9.42□□□□□ -0.9
SMCO4-205ENST00000529714 I3L3M4 83 aa9.41□□□□□ -0.9
SMCO4-205ENST00000529714 VCYO14598 125 aa9.41□□□□□ -0.9
SMCO4-205ENST00000529714 ESRGQ1W209 222 aa9.41□□□□□ -0.9
SMCO4-205ENST00000529714 SMIM2Q9BVW6 85 aa9.41□□□□□ -0.9
SMCO4-205ENST00000529714 MAP1LC3AQ9H492 121 aa9.41□□□□□ -0.9
SMCO4-205ENST00000529714 ALMS1Q8TCU4 4167 aa9.4□□□□□ -0.9
SMCO4-205ENST00000529714 LELP1Q5T871 98 aa9.4□□□□□ -0.9
SMCO4-205ENST00000529714 MRPS16Q9Y3D3 137 aaKnown RBP9.4□□□□□ -0.9
SMCO4-205ENST00000529714 VPS13DQ5THJ4 4388 aa9.4□□□□□ -0.9
SMCO4-205ENST00000529714 TRBV6-8A0A0A6YYG3 113 aa9.39□□□□□ -0.91
SMCO4-205ENST00000529714 IGHV3-38A0A0C4DH36 116 aa9.39□□□□□ -0.91
SMCO4-205ENST00000529714 TCAPO15273 167 aa9.39□□□□□ -0.91
SMCO4-205ENST00000529714 TRGC2P03986 189 aa9.39□□□□□ -0.91
SMCO4-205ENST00000529714 PMCHP20382 165 aa9.39□□□□□ -0.91
SMCO4-205ENST00000529714 COTL1Q14019 142 aa9.39□□□□□ -0.91
SMCO4-205ENST00000529714 LGALS9CQ6DKI2 356 aa9.39□□□□□ -0.91
SMCO4-205ENST00000529714 KIR2DL4Q99706 377 aa9.39□□□□□ -0.91
SMCO4-205ENST00000529714 UPK3BQ9BT76 320 aa9.39□□□□□ -0.91
SMCO4-205ENST00000529714 LINC00588Q9Y4M8 146 aa9.39□□□□□ -0.91
SMCO4-205ENST00000529714 DNAH1Q9P2D7 4330 aa9.39□□□□□ -0.91
SMCO4-205ENST00000529714 LYSTQ99698 3801 aa9.39□□□□□ -0.91
SMCO4-205ENST00000529714 IQCJQ1A5X6 159 aa9.38□□□□□ -0.91
SMCO4-205ENST00000529714 NTM-AS1Q6ZSK4 140 aa9.38□□□□□ -0.91
SMCO4-205ENST00000529714 NXT2Q9NPJ8 142 aaKnown RBP9.38□□□□□ -0.91
SMCO4-205ENST00000529714 IGLV2-18A0A075B6J9 118 aa9.37□□□□□ -0.91
SMCO4-205ENST00000529714 TRBV25-1A0A075B6N4 114 aa9.37□□□□□ -0.91
SMCO4-205ENST00000529714 IGHV1-24A0A0C4DH33 117 aa9.37□□□□□ -0.91
SMCO4-205ENST00000529714 K7EMI3 77 aa9.37□□□□□ -0.91
SMCO4-205ENST00000529714 TSHBP01222 138 aa9.37□□□□□ -0.91
SMCO4-205ENST00000529714 UBE2DNLQ8IWF7 75 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms