RNA–Protein interactions for RNA: ENST00000528865.5

CSTF3-208, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 5

Gene CSTF3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-208ENST00000528865 FAM74A4Q5TZK3 123 aa6.14□□□□□ -1.43
CSTF3-208ENST00000528865 C10orf126Q8N4M7 172 aa6.14□□□□□ -1.43
CSTF3-208ENST00000528865 OPRPNQ99935 248 aaPredicted RBP6.14□□□□□ -1.43
CSTF3-208ENST00000528865 TSSC4Q9Y5U2 329 aaPredicted RBP6.14□□□□□ -1.43
CSTF3-208ENST00000528865 A8MWV9 139 aa6.13□□□□□ -1.43
CSTF3-208ENST00000528865 H3BMM0 161 aa6.13□□□□□ -1.43
CSTF3-208ENST00000528865 M0R2P5 195 aa6.13□□□□□ -1.43
CSTF3-208ENST00000528865 TGFAP01135 160 aa6.13□□□□□ -1.43
CSTF3-208ENST00000528865 TCTEX1D4Q5JR98 221 aa6.13□□□□□ -1.43
CSTF3-208ENST00000528865 DNAJC30Q96LL9 226 aa6.13□□□□□ -1.43
CSTF3-208ENST00000528865 LINC01600Q96MT4 127 aa6.13□□□□□ -1.43
CSTF3-208ENST00000528865 CLUHP3Q96NS8 147 aa6.13□□□□□ -1.43
CSTF3-208ENST00000528865 VCX2Q9H322 139 aa6.13□□□□□ -1.43
CSTF3-208ENST00000528865 PRO1854Q9UHT4 67 aa6.13□□□□□ -1.43
CSTF3-208ENST00000528865 CEP295Q9C0D2 2601 aa6.13□□□□□ -1.43
CSTF3-208ENST00000528865 A0A0B4J2C4 111 aa6.12□□□□□ -1.43
CSTF3-208ENST00000528865 A0A0J9YXV3 536 aa6.12□□□□□ -1.43
CSTF3-208ENST00000528865 RBMY1BA6NDE4 496 aaKnown RBP6.12□□□□□ -1.43
CSTF3-208ENST00000528865 RBMY1EA6NEQ0 496 aaKnown RBP6.12□□□□□ -1.43
CSTF3-208ENST00000528865 EIF4EBP3O60516 100 aaPredicted RBP6.12□□□□□ -1.43
CSTF3-208ENST00000528865 APOMO95445 188 aa6.12□□□□□ -1.43
CSTF3-208ENST00000528865 RBMY1DP0C7P1 496 aaKnown RBP6.12□□□□□ -1.43
CSTF3-208ENST00000528865 IGHV4-31P0DP07 118 aa6.12□□□□□ -1.43
CSTF3-208ENST00000528865 PSMB2P49721 201 aa6.12□□□□□ -1.43
CSTF3-208ENST00000528865 MRPS36P82909 103 aaKnown RBP6.12□□□□□ -1.43
CSTF3-208ENST00000528865 FOXI1Q12951 378 aa6.12□□□□□ -1.43
CSTF3-208ENST00000528865 BEAN1Q3B7T3 259 aa6.12□□□□□ -1.43
CSTF3-208ENST00000528865 DEFB104AQ8WTQ1 72 aa6.12□□□□□ -1.43
CSTF3-208ENST00000528865 TMEM263Q8WUH6 116 aaKnown RBP6.12□□□□□ -1.43
CSTF3-208ENST00000528865 NRGNQ92686 78 aa6.12□□□□□ -1.43
CSTF3-208ENST00000528865 C1QTNF4Q9BXJ3 329 aa6.12□□□□□ -1.43
CSTF3-208ENST00000528865 KNCNA6PVL3 124 aa6.11□□□□□ -1.43
CSTF3-208ENST00000528865 TCL1BO95988 128 aa6.11□□□□□ -1.43
CSTF3-208ENST00000528865 IGHV3-33P01772 117 aa6.11□□□□□ -1.43
CSTF3-208ENST00000528865 AZU1P20160 251 aa6.11□□□□□ -1.43
CSTF3-208ENST00000528865 DEFB131AP59861 70 aa6.11□□□□□ -1.43
CSTF3-208ENST00000528865 DUX5Q96PT3 197 aa6.11□□□□□ -1.43
CSTF3-208ENST00000528865 SPANXA1Q9NS26 97 aa6.11□□□□□ -1.43
CSTF3-208ENST00000528865 SPTAN1Q13813 2472 aaKnown RBP6.11□□□□□ -1.43
CSTF3-208ENST00000528865 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.1□□□□□ -1.43
CSTF3-208ENST00000528865 IGHV1-58A0A0C4DH39 117 aa6.1□□□□□ -1.43
CSTF3-208ENST00000528865 LOC107984156A0A0G2JMH3 177 aa6.1□□□□□ -1.43
CSTF3-208ENST00000528865 A0A0J9YXY3 114 aa6.1□□□□□ -1.43
CSTF3-208ENST00000528865 TINCRA0A1B0GVN0 87 aa6.1□□□□□ -1.43
CSTF3-208ENST00000528865 A4D1N5 150 aa6.1□□□□□ -1.43
CSTF3-208ENST00000528865 RS1O15537 224 aa6.1□□□□□ -1.43
CSTF3-208ENST00000528865 SLURP1P55000 103 aa6.1□□□□□ -1.43
CSTF3-208ENST00000528865 ZNF415Q09FC8 603 aa6.1□□□□□ -1.43
CSTF3-208ENST00000528865 MUSTN1Q8IVN3 82 aa6.1□□□□□ -1.43
CSTF3-208ENST00000528865 ARL17AQ8IVW1 177 aa6.1□□□□□ -1.43
CSTF3-208ENST00000528865 RNF183Q96D59 192 aa6.1□□□□□ -1.43
CSTF3-208ENST00000528865 CARD19Q96LW7 228 aa6.1□□□□□ -1.43
CSTF3-208ENST00000528865 SPXQ9BT56 116 aa6.1□□□□□ -1.43
CSTF3-208ENST00000528865 CHCHD7Q9BUK0 85 aa6.1□□□□□ -1.43
CSTF3-208ENST00000528865 PEMTQ9UBM1 199 aa6.1□□□□□ -1.43
CSTF3-208ENST00000528865 TNFRSF18Q9Y5U5 241 aa6.1□□□□□ -1.43
CSTF3-208ENST00000528865 KALRNO60229 2985 aa6.09□□□□□ -1.43
CSTF3-208ENST00000528865 DCHS2Q6V1P9 2916 aa6.09□□□□□ -1.43
CSTF3-208ENST00000528865 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.09□□□□□ -1.431e-13■■■■■ 50.6
CSTF3-208ENST00000528865 IGHV3-53P01767 116 aa6.09□□□□□ -1.43
CSTF3-208ENST00000528865 IGHV3-30-3P0DP02 117 aa6.09□□□□□ -1.43
CSTF3-208ENST00000528865 INSL3P51460 131 aa6.09□□□□□ -1.43
CSTF3-208ENST00000528865 PROK1P58294 105 aa6.09□□□□□ -1.43
CSTF3-208ENST00000528865 TIRAPP58753 221 aa6.09□□□□□ -1.43
CSTF3-208ENST00000528865 Q6ZSN1 163 aa6.09□□□□□ -1.43
CSTF3-208ENST00000528865 C18orf65Q6ZTR6 163 aa6.09□□□□□ -1.43
CSTF3-208ENST00000528865 TEN1Q86WV5 123 aa6.09□□□□□ -1.43
CSTF3-208ENST00000528865 LRRC75A-AS1Q8N1F1 130 aa6.09□□□□□ -1.43
CSTF3-208ENST00000528865 C11orf72Q8NBR9 251 aa6.09□□□□□ -1.43
CSTF3-208ENST00000528865 C4orf3Q8WVX3 66 aa6.09□□□□□ -1.43
CSTF3-208ENST00000528865 PPDPFLQ8WWR9 84 aa6.09□□□□□ -1.43
CSTF3-208ENST00000528865 LITAFQ99732 161 aa6.09□□□□□ -1.43
CSTF3-208ENST00000528865 BEX4Q9NWD9 120 aaPredicted RBP6.09□□□□□ -1.43
CSTF3-208ENST00000528865 ERG28Q9UKR5 140 aa6.09□□□□□ -1.43
CSTF3-208ENST00000528865 UBE2D4Q9Y2X8 147 aa6.09□□□□□ -1.43
CSTF3-208ENST00000528865 DCHS1Q96JQ0 3298 aa6.08□□□□□ -1.44
CSTF3-208ENST00000528865 TRAV25A0A0B4J276 109 aa6.08□□□□□ -1.44
CSTF3-208ENST00000528865 CD28P10747 220 aa6.08□□□□□ -1.44
CSTF3-208ENST00000528865 DEFB114Q30KQ6 69 aa6.08□□□□□ -1.44
CSTF3-208ENST00000528865 TMEM61Q8N0U2 210 aa6.08□□□□□ -1.44
CSTF3-208ENST00000528865 MTURNQ8N3F0 131 aa6.08□□□□□ -1.44
CSTF3-208ENST00000528865 TMEM86BQ8N661 226 aa6.08□□□□□ -1.44
CSTF3-208ENST00000528865 DUX3Q96PT4 197 aa6.08□□□□□ -1.44
CSTF3-208ENST00000528865 TIMM21Q9BVV7 248 aa6.08□□□□□ -1.44
CSTF3-208ENST00000528865 SPANXDQ9BXN6 97 aa6.08□□□□□ -1.44
CSTF3-208ENST00000528865 GTSF1LQ9H1H1 148 aa6.08□□□□□ -1.44
CSTF3-208ENST00000528865 CDIP1Q9H305 208 aa6.08□□□□□ -1.44
CSTF3-208ENST00000528865 MAP6D1Q9H9H5 199 aa6.08□□□□□ -1.44
CSTF3-208ENST00000528865 SPANXCQ9NY87 97 aa6.08□□□□□ -1.44
CSTF3-208ENST00000528865 IGLV5-45A0A087WSX0 123 aa6.07□□□□□ -1.44
CSTF3-208ENST00000528865 TRBV30A0A0K0K1B3 111 aa6.07□□□□□ -1.44
CSTF3-208ENST00000528865 TIMM17BO60830 172 aa6.07□□□□□ -1.44
CSTF3-208ENST00000528865 SCGB1C2P0DMR2 95 aa6.07□□□□□ -1.44
CSTF3-208ENST00000528865 FAM19A3Q7Z5A8 133 aa6.07□□□□□ -1.44
CSTF3-208ENST00000528865 VSIG2Q96IQ7 327 aa6.07□□□□□ -1.44
CSTF3-208ENST00000528865 CSMD1Q96PZ7 3565 aa6.07□□□□□ -1.44
CSTF3-208ENST00000528865 CSPG4Q6UVK1 2322 aa6.07□□□□□ -1.44
CSTF3-208ENST00000528865 DOPEY2Q9Y3R5 2298 aa6.06□□□□□ -1.44
CSTF3-208ENST00000528865 RELNP78509 3460 aa6.06□□□□□ -1.44
CSTF3-208ENST00000528865 IGHV3-73A0A0B4J1V6 119 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 144.9 ms