RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 FAM231AP0DMU4 169 aa8.61□□□□□ -1.03
LINC01001-201ENST00000526704 FAM231CP0DMU5 169 aa8.61□□□□□ -1.03
LINC01001-201ENST00000526704 IGHV3-30-5P0DP03 117 aa8.61□□□□□ -1.03
LINC01001-201ENST00000526704 UBE2D3P61077 147 aa8.61□□□□□ -1.03
LINC01001-201ENST00000526704 UBE2D2P62837 147 aa8.61□□□□□ -1.03
LINC01001-201ENST00000526704 NFE4Q86UQ8 179 aa8.61□□□□□ -1.03
LINC01001-201ENST00000526704 ZNF418Q8TF45 676 aaPredicted RBP8.61□□□□□ -1.03
LINC01001-201ENST00000526704 APOMO95445 188 aa8.6□□□□□ -1.03
LINC01001-201ENST00000526704 INSL3P51460 131 aa8.6□□□□□ -1.03
LINC01001-201ENST00000526704 CFAP126Q5VTH2 177 aa8.6□□□□□ -1.03
LINC01001-201ENST00000526704 NDUFA11Q86Y39 141 aa8.6□□□□□ -1.03
LINC01001-201ENST00000526704 SLC25A29Q8N8R3 303 aa8.6□□□□□ -1.03
LINC01001-201ENST00000526704 DLX4Q92988 240 aaPredicted RBP8.6□□□□□ -1.03
LINC01001-201ENST00000526704 J3QQQ9 107 aa8.6□□□□□ -1.03
LINC01001-201ENST00000526704 SMCPP49901 116 aaPredicted RBP8.6□□□□□ -1.03
LINC01001-201ENST00000526704 SFTA2Q6UW10 78 aa8.6□□□□□ -1.03
LINC01001-201ENST00000526704 IGSF10Q6WRI0 2623 aa8.6□□□□□ -1.03
LINC01001-201ENST00000526704 ATP6V0E2Q8NHE4 81 aa8.59□□□□□ -1.03
LINC01001-201ENST00000526704 DUX5Q96PT3 197 aa8.59□□□□□ -1.03
LINC01001-201ENST00000526704 RBMY1A1P0DJD3 496 aaKnown RBP8.59□□□□□ -1.03
LINC01001-201ENST00000526704 RBMY1CP0DJD4 496 aa8.59□□□□□ -1.03
LINC01001-201ENST00000526704 RBMY1FQ15415 496 aaKnown RBP8.59□□□□□ -1.03
LINC01001-201ENST00000526704 RNF152Q8N8N0 203 aa8.59□□□□□ -1.03
LINC01001-201ENST00000526704 C20orf203Q8NBC4 194 aa8.59□□□□□ -1.03
LINC01001-201ENST00000526704 A0A096LNT2 108 aa8.58□□□□□ -1.04
LINC01001-201ENST00000526704 LOC107984156A0A0G2JMH3 177 aa8.58□□□□□ -1.04
LINC01001-201ENST00000526704 TMEM223A0PJW6 202 aa8.58□□□□□ -1.04
LINC01001-201ENST00000526704 CFC1BP0CG36 223 aa8.58□□□□□ -1.04
LINC01001-201ENST00000526704 CFC1P0CG37 223 aa8.58□□□□□ -1.04
LINC01001-201ENST00000526704 FOXI1Q12951 378 aa8.58□□□□□ -1.04
LINC01001-201ENST00000526704 LYRM7Q5U5X0 104 aa8.58□□□□□ -1.04
LINC01001-201ENST00000526704 ARL17AQ8IVW1 177 aa8.58□□□□□ -1.04
LINC01001-201ENST00000526704 LINC01356Q8N9X3 169 aa8.58□□□□□ -1.04
LINC01001-201ENST00000526704 CR1P17927 2039 aa8.58□□□□□ -1.04
LINC01001-201ENST00000526704 I3L3M4 83 aa8.58□□□□□ -1.04
LINC01001-201ENST00000526704 LGALS3P17931 250 aaKnown RBP8.58□□□□□ -1.04
LINC01001-201ENST00000526704 HOXD3P31249 432 aaPredicted RBP8.58□□□□□ -1.04
LINC01001-201ENST00000526704 PSMB2P49721 201 aa8.58□□□□□ -1.04
LINC01001-201ENST00000526704 TRGV11A0A075B6L2 103 aa8.57□□□□□ -1.04
LINC01001-201ENST00000526704 SPINK8P0C7L1 97 aa8.57□□□□□ -1.04
LINC01001-201ENST00000526704 ZNF22P17026 224 aaPredicted RBP8.57□□□□□ -1.04
LINC01001-201ENST00000526704 DSCR9P59020 149 aa8.57□□□□□ -1.04
LINC01001-201ENST00000526704 CDIP1Q9H305 208 aa8.57□□□□□ -1.04
LINC01001-201ENST00000526704 IGLV4-3A0A075B6K6 122 aa8.57□□□□□ -1.04
LINC01001-201ENST00000526704 LEPROTO15243 131 aa8.57□□□□□ -1.04
LINC01001-201ENST00000526704 C1QTNF4Q9BXJ3 329 aa8.57□□□□□ -1.04
LINC01001-201ENST00000526704 MXRA5Q9NR99 2828 aa8.56□□□□□ -1.04
LINC01001-201ENST00000526704 RHODO00212 210 aa8.56□□□□□ -1.04
LINC01001-201ENST00000526704 ZNF702PQ9H963 129 aa8.56□□□□□ -1.04
LINC01001-201ENST00000526704 VPREB3Q9UKI3 123 aa8.56□□□□□ -1.04
LINC01001-201ENST00000526704 PIEZO1Q92508 2521 aa8.56□□□□□ -1.04
LINC01001-201ENST00000526704 USP9YO00507 2555 aaPredicted RBP8.56□□□□□ -1.04
LINC01001-201ENST00000526704 MAPK1IP1LQ8NDC0 245 aa8.56□□□□□ -1.04
LINC01001-201ENST00000526704 VCX2Q9H322 139 aa8.56□□□□□ -1.04
LINC01001-201ENST00000526704 KNCNA6PVL3 124 aa8.55□□□□□ -1.04
LINC01001-201ENST00000526704 EIF4EBP3O60516 100 aaPredicted RBP8.55□□□□□ -1.04
LINC01001-201ENST00000526704 TCL1BO95988 128 aa8.55□□□□□ -1.04
LINC01001-201ENST00000526704 ELANEP08246 267 aa8.55□□□□□ -1.04
LINC01001-201ENST00000526704 C10orf126Q8N4M7 172 aa8.55□□□□□ -1.04
LINC01001-201ENST00000526704 EDA2RQ9HAV5 297 aa8.55□□□□□ -1.04
LINC01001-201ENST00000526704 IGHV3-64A0A075B6Q5 118 aa8.55□□□□□ -1.04
LINC01001-201ENST00000526704 A0A0J9YXV3 536 aa8.55□□□□□ -1.04
LINC01001-201ENST00000526704 FAM104AQ969W3 186 aa8.55□□□□□ -1.04
LINC01001-201ENST00000526704 UBE2E2Q96LR5 201 aa8.55□□□□□ -1.04
LINC01001-201ENST00000526704 AKAP9Q99996 3911 aa8.55□□□□□ -1.04
LINC01001-201ENST00000526704 PRRC2AP48634 2157 aaKnown RBP8.55□□□□□ -1.04
LINC01001-201ENST00000526704 FBN2P35556 2912 aa8.54□□□□□ -1.04
LINC01001-201ENST00000526704 J3QLI3 93 aa8.54□□□□□ -1.04
LINC01001-201ENST00000526704 ERG28Q9UKR5 140 aa8.54□□□□□ -1.04
LINC01001-201ENST00000526704 MYO18BQ8IUG5 2567 aa8.54□□□□□ -1.04
LINC01001-201ENST00000526704 CACNA1AO00555 2505 aa8.54□□□□□ -1.04
LINC01001-201ENST00000526704 IGHV3-73A0A0B4J1V6 119 aa8.54□□□□□ -1.04
LINC01001-201ENST00000526704 TGFAP01135 160 aa8.54□□□□□ -1.04
LINC01001-201ENST00000526704 MT-ATP8P03928 68 aa8.54□□□□□ -1.04
LINC01001-201ENST00000526704 PROK1P58294 105 aa8.54□□□□□ -1.04
LINC01001-201ENST00000526704 PRO1854Q9UHT4 67 aa8.54□□□□□ -1.04
LINC01001-201ENST00000526704 POLQO75417 2590 aa8.53□□□□□ -1.04
LINC01001-201ENST00000526704 RBMY1BA6NDE4 496 aaKnown RBP8.53□□□□□ -1.04
LINC01001-201ENST00000526704 RBMY1EA6NEQ0 496 aaKnown RBP8.53□□□□□ -1.04
LINC01001-201ENST00000526704 FSHBP01225 129 aa8.53□□□□□ -1.04
LINC01001-201ENST00000526704 RBMY1DP0C7P1 496 aaKnown RBP8.53□□□□□ -1.04
LINC01001-201ENST00000526704 DEFB136Q30KP8 78 aa8.53□□□□□ -1.04
LINC01001-201ENST00000526704 C18orf65Q6ZTR6 163 aa8.53□□□□□ -1.04
LINC01001-201ENST00000526704 Q6ZUT4 128 aa8.53□□□□□ -1.04
LINC01001-201ENST00000526704 A4D1N5 150 aa8.53□□□□□ -1.04
LINC01001-201ENST00000526704 A8MTW9 85 aa8.53□□□□□ -1.04
LINC01001-201ENST00000526704 HTN1P15515 57 aa8.53□□□□□ -1.04
LINC01001-201ENST00000526704 SLURP1P55000 103 aa8.53□□□□□ -1.04
LINC01001-201ENST00000526704 PTH2Q96A98 100 aa8.53□□□□□ -1.04
LINC01001-201ENST00000526704 PRM2P04554 102 aa8.52□□□□□ -1.05
LINC01001-201ENST00000526704 DEFB131AP59861 70 aa8.52□□□□□ -1.05
LINC01001-201ENST00000526704 Q6YL49 198 aa8.52□□□□□ -1.05
LINC01001-201ENST00000526704 RNF183Q96D59 192 aa8.52□□□□□ -1.05
LINC01001-201ENST00000526704 PYGO1Q9Y3Y4 419 aa8.52□□□□□ -1.05
LINC01001-201ENST00000526704 TRBV20-1A0A075B6N2 111 aa8.52□□□□□ -1.05
LINC01001-201ENST00000526704 TRAV2A0A0B4J234 112 aa8.52□□□□□ -1.05
LINC01001-201ENST00000526704 CD28P10747 220 aa8.52□□□□□ -1.05
LINC01001-201ENST00000526704 XGP55808 180 aa8.52□□□□□ -1.05
LINC01001-201ENST00000526704 TMEM263Q8WUH6 116 aaKnown RBP8.52□□□□□ -1.05
LINC01001-201ENST00000526704 SBSPONQ8IVN8 264 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms