RNA–Protein interactions for RNA: ENST00000526313.5

USH1C-204, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best)

Gene USH1C, Length 2,149 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-204ENST00000526313 NPSP0C0P6 89 aa11.6□□□□□ -0.55
USH1C-204ENST00000526313 C12orf54Q6X4T0 127 aa11.6□□□□□ -0.55
USH1C-204ENST00000526313 LINC01587Q99440 93 aa11.6□□□□□ -0.55
USH1C-204ENST00000526313 KIR2DL4Q99706 377 aa11.6□□□□□ -0.55
USH1C-204ENST00000526313 IGIPA6NJ69 53 aa11.59□□□□□ -0.55
USH1C-204ENST00000526313 A8MWV9 139 aa11.59□□□□□ -0.55
USH1C-204ENST00000526313 F8VRH5 84 aa11.59□□□□□ -0.55
USH1C-204ENST00000526313 HTN1P15515 57 aa11.59□□□□□ -0.55
USH1C-204ENST00000526313 BVES-AS1Q5T3Y7 98 aa11.59□□□□□ -0.55
USH1C-204ENST00000526313 STHQ8IWL8 128 aa11.59□□□□□ -0.55
USH1C-204ENST00000526313 BAALCQ8WXS3 180 aa11.59□□□□□ -0.55
USH1C-204ENST00000526313 SPXQ9BT56 116 aa11.59□□□□□ -0.55
USH1C-204ENST00000526313 CYSLTR1Q9Y271 337 aa11.59□□□□□ -0.55
USH1C-204ENST00000526313 PLNP26678 52 aa11.59□□□□□ -0.55
USH1C-204ENST00000526313 BEAN1Q3B7T3 259 aa11.59□□□□□ -0.55
USH1C-204ENST00000526313 OTOGQ6ZRI0 2925 aa11.58□□□□□ -0.56
USH1C-204ENST00000526313 SETD2Q9BYW2 2564 aaPredicted RBP11.58□□□□□ -0.56
USH1C-204ENST00000526313 KRTAP10-3P60369 221 aa11.58□□□□□ -0.56
USH1C-204ENST00000526313 PCP2Q8IVA1 136 aa11.58□□□□□ -0.56
USH1C-204ENST00000526313 C1orf158Q8N1D5 194 aa11.58□□□□□ -0.56
USH1C-204ENST00000526313 IGKV2D-26A0A0A0MRZ7 120 aa11.57□□□□□ -0.56
USH1C-204ENST00000526313 SAP30O75446 220 aa11.57□□□□□ -0.56
USH1C-204ENST00000526313 TSHBP01222 138 aa11.57□□□□□ -0.56
USH1C-204ENST00000526313 ZC2HC1BQ5TFG8 222 aa11.57□□□□□ -0.56
USH1C-204ENST00000526313 RHOHQ15669 191 aa11.57□□□□□ -0.56
USH1C-204ENST00000526313 NDUFA11Q86Y39 141 aa11.57□□□□□ -0.56
USH1C-204ENST00000526313 C19orf73Q9NVV2 129 aa11.57□□□□□ -0.56
USH1C-204ENST00000526313 XCL2Q9UBD3 114 aa11.57□□□□□ -0.56
USH1C-204ENST00000526313 CHTOPQ9Y3Y2 248 aaKnown RBP11.57□□□□□ -0.56
USH1C-204ENST00000526313 NSUN5P1Q3KNT7 163 aa11.56□□□□□ -0.56
USH1C-204ENST00000526313 TMEM141Q96I45 108 aa11.56□□□□□ -0.56
USH1C-204ENST00000526313 TIMM17AQ99595 171 aa11.56□□□□□ -0.56
USH1C-204ENST00000526313 TP53TG1Q9Y2A0 90 aa11.56□□□□□ -0.56
USH1C-204ENST00000526313 PRSS29PA6NIE9 313 aa11.56□□□□□ -0.56
USH1C-204ENST00000526313 NMUP48645 174 aa11.56□□□□□ -0.56
USH1C-204ENST00000526313 CFAP126Q5VTH2 177 aa11.56□□□□□ -0.56
USH1C-204ENST00000526313 IL17DQ8TAD2 202 aa11.56□□□□□ -0.56
USH1C-204ENST00000526313 SETXQ7Z333 2677 aaKnown RBP11.55□□□□□ -0.56
USH1C-204ENST00000526313 NACAE9PAV3 2078 aa11.55□□□□□ -0.56
USH1C-204ENST00000526313 GTSCR1Q86UQ5 136 aa11.55□□□□□ -0.56
USH1C-204ENST00000526313 I3L3M4 83 aa11.54□□□□□ -0.56
USH1C-204ENST00000526313 P0DMU3 169 aa11.54□□□□□ -0.56
USH1C-204ENST00000526313 FAM231AP0DMU4 169 aa11.54□□□□□ -0.56
USH1C-204ENST00000526313 FAM231CP0DMU5 169 aa11.54□□□□□ -0.56
USH1C-204ENST00000526313 TCTAP57738 103 aa11.54□□□□□ -0.56
USH1C-204ENST00000526313 RS1O15537 224 aa11.54□□□□□ -0.56
USH1C-204ENST00000526313 AZU1P20160 251 aa11.54□□□□□ -0.56
USH1C-204ENST00000526313 RPL39P62891 51 aaKnown RBP11.54□□□□□ -0.56
USH1C-204ENST00000526313 GIG44P09565 113 aaPredicted RBP11.53□□□□□ -0.56
USH1C-204ENST00000526313 TMEM97Q5BJF2 176 aa11.53□□□□□ -0.56
USH1C-204ENST00000526313 HIGD1BQ9P298 99 aa11.53□□□□□ -0.56
USH1C-204ENST00000526313 RHODO00212 210 aa11.53□□□□□ -0.56
USH1C-204ENST00000526313 Q6ZSN1 163 aa11.53□□□□□ -0.56
USH1C-204ENST00000526313 INAFM1C9JVW0 142 aa11.52□□□□□ -0.57
USH1C-204ENST00000526313 ORAOV1Q8WV07 137 aa11.52□□□□□ -0.57
USH1C-204ENST00000526313 NIPBLQ6KC79 2804 aaeCLIP11.52□□□□□ -0.57
USH1C-204ENST00000526313 IGHV3-73A0A0B4J1V6 119 aa11.51□□□□□ -0.57
USH1C-204ENST00000526313 PMVKQ15126 192 aa11.51□□□□□ -0.57
USH1C-204ENST00000526313 C20orf203Q8NBC4 194 aa11.51□□□□□ -0.57
USH1C-204ENST00000526313 RNASE8Q8TDE3 154 aaKnown RBP11.51□□□□□ -0.57
USH1C-204ENST00000526313 NOTCH2Q04721 2471 aa11.51□□□□□ -0.57
USH1C-204ENST00000526313 IGHV3-53P01767 116 aa11.51□□□□□ -0.57
USH1C-204ENST00000526313 HSD52Q0P140 79 aa11.51□□□□□ -0.57
USH1C-204ENST00000526313 LINC00482Q8N8I6 264 aa11.51□□□□□ -0.57
USH1C-204ENST00000526313 DEFB104AQ8WTQ1 72 aa11.51□□□□□ -0.57
USH1C-204ENST00000526313 CST9LQ9H4G1 147 aa11.51□□□□□ -0.57
USH1C-204ENST00000526313 COX11Q9Y6N1 276 aa11.51□□□□□ -0.57
USH1C-204ENST00000526313 MRPL16Q9NX20 251 aaKnown RBP11.5□□□□□ -0.57
USH1C-204ENST00000526313 IGLV4-69A0A075B6H9 119 aa11.5□□□□□ -0.57
USH1C-204ENST00000526313 SEC11AP67812 179 aa11.5□□□□□ -0.57
USH1C-204ENST00000526313 TTTY13Q9BZ97 58 aa11.5□□□□□ -0.57
USH1C-204ENST00000526313 TAX1BP3O14907 124 aa11.49□□□□□ -0.57
USH1C-204ENST00000526313 DNAJC30Q96LL9 226 aa11.49□□□□□ -0.57
USH1C-204ENST00000526313 PAPPA-AS1Q5QFB9 102 aa11.48□□□□□ -0.57
USH1C-204ENST00000526313 MAPKAPK5-AS1Q8N8E1 139 aa11.48□□□□□ -0.57
USH1C-204ENST00000526313 TMEM263Q8WUH6 116 aaKnown RBP11.48□□□□□ -0.57
USH1C-204ENST00000526313 Q9UF83 564 aa11.48□□□□□ -0.57
USH1C-204ENST00000526313 TRBV25-1A0A075B6N4 114 aa11.48□□□□□ -0.57
USH1C-204ENST00000526313 CSNK1G2-AS1Q8NCQ2 148 aa11.48□□□□□ -0.57
USH1C-204ENST00000526313 WFDC10AQ9H1F0 79 aa11.48□□□□□ -0.57
USH1C-204ENST00000526313 TNFRSF18Q9Y5U5 241 aa11.48□□□□□ -0.57
USH1C-204ENST00000526313 NSD1Q96L73 2696 aaPredicted RBP11.48□□□□□ -0.57
USH1C-204ENST00000526313 E9PLD3 99 aa11.47□□□□□ -0.57
USH1C-204ENST00000526313 PTTG1IPP53801 180 aa11.47□□□□□ -0.57
USH1C-204ENST00000526313 Q6ZVH6 145 aa11.47□□□□□ -0.57
USH1C-204ENST00000526313 PYGO1Q9Y3Y4 419 aa11.47□□□□□ -0.57
USH1C-204ENST00000526313 IGHV3OR16-12A0A075B7B8 117 aa11.46□□□□□ -0.57
USH1C-204ENST00000526313 C11orf86A6NJI1 115 aa11.46□□□□□ -0.57
USH1C-204ENST00000526313 DAZ2Q13117 558 aaKnown RBP11.46□□□□□ -0.57
USH1C-204ENST00000526313 C1QTNF4Q9BXJ3 329 aa11.45□□□□□ -0.58
USH1C-204ENST00000526313 PF4P02776 101 aa11.45□□□□□ -0.58
USH1C-204ENST00000526313 FAM104AQ969W3 186 aa11.45□□□□□ -0.58
USH1C-204ENST00000526313 FN1P02751 2386 aaKnown RBP11.44□□□□□ -0.58
USH1C-204ENST00000526313 TRAV8-6A0A0B4J262 113 aa11.44□□□□□ -0.58
USH1C-204ENST00000526313 PLAC8L1A1L4L8 177 aa11.44□□□□□ -0.58
USH1C-204ENST00000526313 CRLF1O75462 422 aa11.44□□□□□ -0.58
USH1C-204ENST00000526313 NFE4Q86UQ8 179 aa11.44□□□□□ -0.58
USH1C-204ENST00000526313 OR11H2Q8NH07 326 aa11.44□□□□□ -0.58
USH1C-204ENST00000526313 CHAC1Q9BUX1 264 aa11.44□□□□□ -0.58
USH1C-204ENST00000526313 C2CD3Q4AC94 2353 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms