RNA–Protein interactions for RNA: ENST00000525918.1

VPS26B-203, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-203ENST00000525918 MAP1LC3B2A6NCE7 125 aa6.87□□□□□ -1.31
VPS26B-203ENST00000525918 GIPP09681 153 aaPredicted RBP6.87□□□□□ -1.31
VPS26B-203ENST00000525918 RPL19P84098 196 aaKnown RBP6.87□□□□□ -1.31
VPS26B-203ENST00000525918 CST9LP1Q5W188 147 aa6.87□□□□□ -1.31
VPS26B-203ENST00000525918 ZNF471Q9BX82 626 aaPredicted RBP6.87□□□□□ -1.31
VPS26B-203ENST00000525918 MAP1LC3BQ9GZQ8 125 aa6.87□□□□□ -1.31
VPS26B-203ENST00000525918 PRR34Q9NV39 138 aa6.87□□□□□ -1.31
VPS26B-203ENST00000525918 PKHD1L1Q86WI1 4243 aa6.87□□□□□ -1.31
VPS26B-203ENST00000525918 F5H697 171 aa6.86□□□□□ -1.31
VPS26B-203ENST00000525918 CXCL1P09341 107 aa6.86□□□□□ -1.31
VPS26B-203ENST00000525918 AKR1C3P42330 323 aa6.86□□□□□ -1.31
VPS26B-203ENST00000525918 SDIM1Q6ZPB5 146 aa6.86□□□□□ -1.31
VPS26B-203ENST00000525918 NTM-AS1Q6ZSK4 140 aa6.86□□□□□ -1.31
VPS26B-203ENST00000525918 LINC00269Q8N2A0 174 aa6.86□□□□□ -1.31
VPS26B-203ENST00000525918 CLRN3Q8NCR9 226 aa6.86□□□□□ -1.31
VPS26B-203ENST00000525918 OR10AG1Q8NH19 301 aa6.86□□□□□ -1.31
VPS26B-203ENST00000525918 STOML3Q8TAV4 291 aa6.86□□□□□ -1.31
VPS26B-203ENST00000525918 SSBP4Q9BWG4 385 aaPredicted RBP6.86□□□□□ -1.31
VPS26B-203ENST00000525918 VAX2Q9UIW0 290 aa6.86□□□□□ -1.31
VPS26B-203ENST00000525918 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.86□□□□□ -1.31
VPS26B-203ENST00000525918 FXYD6-FXYD2A0A087WZ82 144 aa6.85□□□□□ -1.31
VPS26B-203ENST00000525918 A0A0D9SG52 128 aa6.85□□□□□ -1.31
VPS26B-203ENST00000525918 SNAI2O43623 268 aa6.85□□□□□ -1.31
VPS26B-203ENST00000525918 S100A9P06702 114 aaKnown RBP6.85□□□□□ -1.31
VPS26B-203ENST00000525918 OR5AL1P0C617 328 aa6.85□□□□□ -1.31
VPS26B-203ENST00000525918 RBX1P62877 108 aa6.85□□□□□ -1.31
VPS26B-203ENST00000525918 SPANXN1Q5VSR9 72 aa6.85□□□□□ -1.31
VPS26B-203ENST00000525918 KRTAP26-1Q6PEX3 210 aa6.85□□□□□ -1.31
VPS26B-203ENST00000525918 Q6ZRU5 148 aa6.85□□□□□ -1.31
VPS26B-203ENST00000525918 DERL1Q9BUN8 251 aa6.85□□□□□ -1.31
VPS26B-203ENST00000525918 TRBV25-1A0A075B6N4 114 aa6.84□□□□□ -1.31
VPS26B-203ENST00000525918 A6NJY4 79 aa6.84□□□□□ -1.31
VPS26B-203ENST00000525918 PANO1I0J062 215 aa6.84□□□□□ -1.31
VPS26B-203ENST00000525918 SMIM17P0DL12 118 aa6.84□□□□□ -1.31
VPS26B-203ENST00000525918 GAGE6Q13070 117 aa6.84□□□□□ -1.31
VPS26B-203ENST00000525918 CLPSL2Q6UWE3 100 aa6.84□□□□□ -1.31
VPS26B-203ENST00000525918 MLST8Q9BVC4 326 aa6.84□□□□□ -1.31
VPS26B-203ENST00000525918 KRTAP4-8Q9BYQ9 185 aa6.84□□□□□ -1.31
VPS26B-203ENST00000525918 MUC21A0A0G2JKD1 596 aa6.83□□□□□ -1.32
VPS26B-203ENST00000525918 MUC21A0A140T8X8 626 aa6.83□□□□□ -1.32
VPS26B-203ENST00000525918 PAGE4O60829 102 aa6.83□□□□□ -1.32
VPS26B-203ENST00000525918 MT1HL1P0DM35 61 aa6.83□□□□□ -1.32
VPS26B-203ENST00000525918 CNBPP62633 177 aaKnown RBP6.83□□□□□ -1.32
VPS26B-203ENST00000525918 REG3AQ06141 175 aa6.83□□□□□ -1.32
VPS26B-203ENST00000525918 CIRBPQ14011 172 aaKnown RBP6.83□□□□□ -1.32
VPS26B-203ENST00000525918 KIF25-AS1Q9Y6Z4 181 aa6.83□□□□□ -1.32
VPS26B-203ENST00000525918 IGLV10-54A0A075B6I4 117 aa6.82□□□□□ -1.32
VPS26B-203ENST00000525918 TRAV8-4A0A0B4J246 113 aa6.82□□□□□ -1.32
VPS26B-203ENST00000525918 IGHV1-24A0A0C4DH33 117 aa6.82□□□□□ -1.32
VPS26B-203ENST00000525918 hDV102S1A0JD36 115 aa6.82□□□□□ -1.32
VPS26B-203ENST00000525918 P01737 135 aa6.82□□□□□ -1.32
VPS26B-203ENST00000525918 SSTP61278 116 aa6.82□□□□□ -1.32
VPS26B-203ENST00000525918 IQCJQ1A5X6 159 aa6.82□□□□□ -1.32
VPS26B-203ENST00000525918 BAGE2Q86Y30 109 aa6.82□□□□□ -1.32
VPS26B-203ENST00000525918 DPH3Q96FX2 82 aa6.82□□□□□ -1.32
VPS26B-203ENST00000525918 CYTL1Q9NRR1 136 aa6.82□□□□□ -1.32
VPS26B-203ENST00000525918 IGHV3-64A0A075B6Q5 118 aa6.81□□□□□ -1.32
VPS26B-203ENST00000525918 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.81□□□□□ -1.32
VPS26B-203ENST00000525918 SFT2D1Q8WV19 159 aa6.81□□□□□ -1.32
VPS26B-203ENST00000525918 RNF185Q96GF1 192 aa6.81□□□□□ -1.32
VPS26B-203ENST00000525918 AP1S3Q96PC3 154 aa6.81□□□□□ -1.32
VPS26B-203ENST00000525918 AP5S1Q9NUS5 200 aa6.81□□□□□ -1.32
VPS26B-203ENST00000525918 A0A1B0GUV1 79 aa6.8□□□□□ -1.32
VPS26B-203ENST00000525918 SCO2A0A1W2PP80 73 aa6.8□□□□□ -1.32
VPS26B-203ENST00000525918 H7C1H1 209 aa6.8□□□□□ -1.32
VPS26B-203ENST00000525918 M0QY20 66 aa6.8□□□□□ -1.32
VPS26B-203ENST00000525918 ARPC5O15511 151 aa6.8□□□□□ -1.32
VPS26B-203ENST00000525918 PFDN1O60925 122 aa6.8□□□□□ -1.32
VPS26B-203ENST00000525918 GZMBP10144 247 aa6.8□□□□□ -1.32
VPS26B-203ENST00000525918 TMUB2Q71RG4 321 aa6.8□□□□□ -1.32
VPS26B-203ENST00000525918 C20orf203Q8NBC4 194 aa6.8□□□□□ -1.32
VPS26B-203ENST00000525918 MBD3L1Q8WWY6 194 aa6.8□□□□□ -1.32
VPS26B-203ENST00000525918 A0A087WYN8 130 aa6.79□□□□□ -1.32
VPS26B-203ENST00000525918 G3V3Q6 166 aa6.79□□□□□ -1.32
VPS26B-203ENST00000525918 IGLV4-60A0A075B6I1 120 aa6.78□□□□□ -1.32
VPS26B-203ENST00000525918 UMAD1C9J7I0 102 aa6.78□□□□□ -1.32
VPS26B-203ENST00000525918 SLPIP03973 132 aa6.78□□□□□ -1.32
VPS26B-203ENST00000525918 MGPP08493 103 aa6.78□□□□□ -1.32
VPS26B-203ENST00000525918 FAM213BQ8TBF2 198 aa6.78□□□□□ -1.32
VPS26B-203ENST00000525918 SPACA4Q8TDM5 124 aa6.78□□□□□ -1.32
VPS26B-203ENST00000525918 TMEM243Q9BU79 118 aa6.78□□□□□ -1.32
VPS26B-203ENST00000525918 A0A1B0GV50 99 aa6.77□□□□□ -1.33
VPS26B-203ENST00000525918 CHTF8P0CG12 524 aa6.77□□□□□ -1.33
VPS26B-203ENST00000525918 RPL35P42766 123 aaKnown RBP6.77□□□□□ -1.33
VPS26B-203ENST00000525918 RAB5CP51148 216 aa6.77□□□□□ -1.33
VPS26B-203ENST00000525918 NKX2-5P52952 324 aaPredicted RBP6.77□□□□□ -1.33
VPS26B-203ENST00000525918 SUMO4Q6EEV6 95 aa6.77□□□□□ -1.33
VPS26B-203ENST00000525918 KCNRGQ8N5I3 272 aa6.77□□□□□ -1.33
VPS26B-203ENST00000525918 PGLYRP4Q96LB8 373 aa6.77□□□□□ -1.33
VPS26B-203ENST00000525918 DPH3P1Q9H4G8 78 aa6.77□□□□□ -1.33
VPS26B-203ENST00000525918 UBE2L6O14933 153 aa6.76□□□□□ -1.33
VPS26B-203ENST00000525918 H2AFB1P0C5Y9 115 aa6.76□□□□□ -1.33
VPS26B-203ENST00000525918 IGLC6P0CF74 106 aa6.76□□□□□ -1.33
VPS26B-203ENST00000525918 RPS20P60866 119 aaKnown RBP6.76□□□□□ -1.33
VPS26B-203ENST00000525918 CACNG7P62955 275 aa6.76□□□□□ -1.33
VPS26B-203ENST00000525918 WDR73Q6P4I2 378 aa6.76□□□□□ -1.33
VPS26B-203ENST00000525918 RASL11AQ6T310 242 aa6.76□□□□□ -1.33
VPS26B-203ENST00000525918 FER1L6-AS1Q8NA97 138 aa6.76□□□□□ -1.33
VPS26B-203ENST00000525918 C7orf33Q8WU49 177 aa6.76□□□□□ -1.33
VPS26B-203ENST00000525918 TPPP3Q9BW30 176 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms