RNA–Protein interactions for RNA: ENST00000525913.1

SSH3-204, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2

Gene SSH3, Length 264 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-204ENST00000525913 KRTAP11-1Q8IUC1 163 aa4.14□□□□□ -1.75
SSH3-204ENST00000525913 C5orf17Q8NAS9 161 aa4.14□□□□□ -1.75
SSH3-204ENST00000525913 LINC00526Q96FQ7 95 aa4.14□□□□□ -1.75
SSH3-204ENST00000525913 KRTAP4-7Q9BYR0 210 aa4.14□□□□□ -1.75
SSH3-204ENST00000525913 EPDR1Q9UM22 224 aa4.14□□□□□ -1.75
SSH3-204ENST00000525913 PHLDA3Q9Y5J5 127 aa4.14□□□□□ -1.75
SSH3-204ENST00000525913 IGHV1-24A0A0C4DH33 117 aa4.13□□□□□ -1.75
SSH3-204ENST00000525913 HMGB3O15347 200 aaKnown RBP4.13□□□□□ -1.75
SSH3-204ENST00000525913 MT-ND6P03923 174 aa4.13□□□□□ -1.75
SSH3-204ENST00000525913 AMTP48728 403 aa4.13□□□□□ -1.75
SSH3-204ENST00000525913 LINC01547P58512 204 aaPredicted RBP4.13□□□□□ -1.75
SSH3-204ENST00000525913 RAB2AP61019 212 aa4.13□□□□□ -1.75
SSH3-204ENST00000525913 ZFP69Q49AA0 526 aa4.13□□□□□ -1.75
SSH3-204ENST00000525913 LCE2CQ5TA81 110 aa4.13□□□□□ -1.75
SSH3-204ENST00000525913 PQLC2Q6ZP29 291 aa4.13□□□□□ -1.75
SSH3-204ENST00000525913 PHF5AQ7RTV0 110 aaKnown RBP4.13□□□□□ -1.75
SSH3-204ENST00000525913 AQP10Q96PS8 301 aa4.13□□□□□ -1.75
SSH3-204ENST00000525913 KRTAP4-12Q9BQ66 201 aa4.13□□□□□ -1.75
SSH3-204ENST00000525913 SSBP4Q9BWG4 385 aaPredicted RBP4.13□□□□□ -1.75
SSH3-204ENST00000525913 RBM38Q9H0Z9 239 aaKnown RBP4.13□□□□□ -1.75
SSH3-204ENST00000525913 KCNIP2Q9NS61 270 aa4.13□□□□□ -1.75
SSH3-204ENST00000525913 TRAV6A0A075B6T7 132 aa4.12□□□□□ -1.75
SSH3-204ENST00000525913 TRAV1-1A0A0B4J248 108 aa4.12□□□□□ -1.75
SSH3-204ENST00000525913 TRAV34A0A0B4J273 112 aa4.12□□□□□ -1.75
SSH3-204ENST00000525913 NAP1L6A6NFF2 107 aa4.12□□□□□ -1.75
SSH3-204ENST00000525913 C17orf112F2Z3M2 114 aa4.12□□□□□ -1.75
SSH3-204ENST00000525913 H0YIZ8 118 aa4.12□□□□□ -1.75
SSH3-204ENST00000525913 H3BMQ9 156 aa4.12□□□□□ -1.75
SSH3-204ENST00000525913 K7EQM0 130 aa4.12□□□□□ -1.75
SSH3-204ENST00000525913 M0R036 132 aa4.12□□□□□ -1.75
SSH3-204ENST00000525913 TPT1P13693 172 aaKnown RBP4.12□□□□□ -1.75
SSH3-204ENST00000525913 SUMO1P63165 101 aaKnown RBP4.12□□□□□ -1.75
SSH3-204ENST00000525913 C9orf116Q5BN46 136 aaPredicted RBP4.12□□□□□ -1.75
SSH3-204ENST00000525913 COX8CQ7Z4L0 72 aa4.12□□□□□ -1.75
SSH3-204ENST00000525913 ZFP82Q8N141 532 aa4.12□□□□□ -1.75
SSH3-204ENST00000525913 ZNF471Q9BX82 626 aaPredicted RBP4.12□□□□□ -1.75
SSH3-204ENST00000525913 KRTAP4-1Q9BYQ7 146 aa4.12□□□□□ -1.75
SSH3-204ENST00000525913 ARL2-SNX15V9GYD0 113 aa4.12□□□□□ -1.75
SSH3-204ENST00000525913 SH2D1AO60880 128 aa4.11□□□□□ -1.75
SSH3-204ENST00000525913 LORP23490 312 aaPredicted RBP4.11□□□□□ -1.75
SSH3-204ENST00000525913 RPL12P30050 165 aaKnown RBP4.11□□□□□ -1.75
SSH3-204ENST00000525913 TMBIM6P55061 237 aa4.11□□□□□ -1.75
SSH3-204ENST00000525913 CYCSP99999 105 aaKnown RBP4.11□□□□□ -1.75
SSH3-204ENST00000525913 FOXI1Q12951 378 aa4.11□□□□□ -1.75
SSH3-204ENST00000525913 GAGE2BQ13066 116 aa4.11□□□□□ -1.75
SSH3-204ENST00000525913 ZNF56Q15929 161 aa4.11□□□□□ -1.75
SSH3-204ENST00000525913 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.11□□□□□ -1.75
SSH3-204ENST00000525913 CHCHD10Q8WYQ3 142 aaPredicted RBP4.11□□□□□ -1.75
SSH3-204ENST00000525913 MRPS26Q9BYN8 205 aaKnown RBP4.11□□□□□ -1.75
SSH3-204ENST00000525913 TMSB15BA0A087X1C1 80 aa4.1□□□□□ -1.75
SSH3-204ENST00000525913 STAG3L2P0CL84 134 aa4.1□□□□□ -1.75
SSH3-204ENST00000525913 STAG3L3P0CL85 134 aa4.1□□□□□ -1.75
SSH3-204ENST00000525913 ARL14EPLP0DKL9 152 aa4.1□□□□□ -1.75
SSH3-204ENST00000525913 RPL13AP40429 203 aaKnown RBP4.1□□□□□ -1.75
SSH3-204ENST00000525913 SULT1A2P50226 295 aa4.1□□□□□ -1.75
SSH3-204ENST00000525913 UBE2D1P51668 147 aa4.1□□□□□ -1.75
SSH3-204ENST00000525913 TPRXLQ17RH7 258 aa4.1□□□□□ -1.75
SSH3-204ENST00000525913 ZNF674Q2M3X9 581 aa4.1□□□□□ -1.75
SSH3-204ENST00000525913 LINC01559Q495D7 138 aa4.1□□□□□ -1.75
SSH3-204ENST00000525913 CARD19Q96LW7 228 aa4.1□□□□□ -1.75
SSH3-204ENST00000525913 SDHCQ99643 169 aaPredicted RBP4.1□□□□□ -1.75
SSH3-204ENST00000525913 SEC22CQ9BRL7 303 aa4.1□□□□□ -1.75
SSH3-204ENST00000525913 TMEM243Q9BU79 118 aa4.1□□□□□ -1.75
SSH3-204ENST00000525913 RPP21Q9H633 154 aaKnown RBP4.1□□□□□ -1.75
SSH3-204ENST00000525913 CARHSP1Q9Y2V2 147 aaKnown RBP4.1□□□□□ -1.75
SSH3-204ENST00000525913 IGKV3OR2-268A0A0C4DH90 116 aa4.09□□□□□ -1.75
SSH3-204ENST00000525913 A0A1W2PPV4 95 aa4.09□□□□□ -1.75
SSH3-204ENST00000525913 F5H697 171 aa4.09□□□□□ -1.75
SSH3-204ENST00000525913 M0QY20 66 aa4.09□□□□□ -1.75
SSH3-204ENST00000525913 SYCNQ0VAF6 134 aa4.09□□□□□ -1.75
SSH3-204ENST00000525913 OR10AG1Q8NH19 301 aa4.09□□□□□ -1.75
SSH3-204ENST00000525913 CDIP1Q9H305 208 aa4.09□□□□□ -1.75
SSH3-204ENST00000525913 WFDC1Q9HC57 220 aa4.09□□□□□ -1.75
SSH3-204ENST00000525913 PKIGQ9Y2B9 76 aa4.09□□□□□ -1.75
SSH3-204ENST00000525913 LOC107984640A0A0U1RRK4 108 aa4.08□□□□□ -1.76
SSH3-204ENST00000525913 SNAI2O43623 268 aa4.08□□□□□ -1.76
SSH3-204ENST00000525913 BCL2P10415 239 aa4.08□□□□□ -1.76
SSH3-204ENST00000525913 GCHFRP30047 84 aa4.08□□□□□ -1.76
SSH3-204ENST00000525913 CNPY1Q3B7I2 92 aa4.08□□□□□ -1.76
SSH3-204ENST00000525913 RETNLBQ9BQ08 111 aa4.08□□□□□ -1.76
SSH3-204ENST00000525913 A0A087WZ39 114 aa4.07□□□□□ -1.76
SSH3-204ENST00000525913 IGHV1-58A0A0C4DH39 117 aa4.07□□□□□ -1.76
SSH3-204ENST00000525913 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.07□□□□□ -1.76
SSH3-204ENST00000525913 PLA2G10O15496 165 aa4.07□□□□□ -1.76
SSH3-204ENST00000525913 MEF2BQ02080 365 aaPredicted RBP4.07□□□□□ -1.76
SSH3-204ENST00000525913 FAM162BQ5T6X4 162 aa4.07□□□□□ -1.76
SSH3-204ENST00000525913 Q86TA4 180 aa4.07□□□□□ -1.76
SSH3-204ENST00000525913 KRTAP7-1Q8IUC3 87 aa4.07□□□□□ -1.76
SSH3-204ENST00000525913 NUP35Q8NFH5 326 aa4.07□□□□□ -1.76
SSH3-204ENST00000525913 SCGB1C1Q8TD33 95 aa4.07□□□□□ -1.76
SSH3-204ENST00000525913 RAB24Q969Q5 203 aa4.07□□□□□ -1.76
SSH3-204ENST00000525913 PGLYRP4Q96LB8 373 aa4.07□□□□□ -1.76
SSH3-204ENST00000525913 MED28Q9H204 178 aa4.07□□□□□ -1.76
SSH3-204ENST00000525913 A0A087X002 238 aa4.06□□□□□ -1.76
SSH3-204ENST00000525913 MUC21A0A140T8X8 626 aa4.06□□□□□ -1.76
SSH3-204ENST00000525913 A0A1W2PRE2 83 aa4.06□□□□□ -1.76
SSH3-204ENST00000525913 SIX6O95475 246 aa4.06□□□□□ -1.76
SSH3-204ENST00000525913 FGF6P10767 208 aa4.06□□□□□ -1.76
SSH3-204ENST00000525913 EIF5AP63241 154 aaKnown RBP4.06□□□□□ -1.76
SSH3-204ENST00000525913 SMIM3Q9BZL3 60 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms