RNA–Protein interactions for RNA: ENST00000525503.5

CCDC90B-203, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-203ENST00000525503 OCIAD2Q56VL3 154 aa12.13□□□□□ -0.47
CCDC90B-203ENST00000525503 PIK3CD-AS1Q5SR53 167 aa12.13□□□□□ -0.47
CCDC90B-203ENST00000525503 DEFB104AQ8WTQ1 72 aa12.13□□□□□ -0.47
CCDC90B-203ENST00000525503 DUX3Q96PT4 197 aa12.13□□□□□ -0.47
CCDC90B-203ENST00000525503 SPAG8Q99932 426 aaPredicted RBP12.13□□□□□ -0.47
CCDC90B-203ENST00000525503 CD300EQ496F6 205 aaPredicted RBP12.12□□□□□ -0.47
CCDC90B-203ENST00000525503 MAP6D1Q9H9H5 199 aa12.12□□□□□ -0.47
CCDC90B-203ENST00000525503 NAV2Q8IVL1 2488 aa12.12□□□□□ -0.47
CCDC90B-203ENST00000525503 RBMY1BA6NDE4 496 aaKnown RBP12.11□□□□□ -0.47
CCDC90B-203ENST00000525503 RBMY1EA6NEQ0 496 aaKnown RBP12.11□□□□□ -0.47
CCDC90B-203ENST00000525503 RBMY1DP0C7P1 496 aaKnown RBP12.11□□□□□ -0.47
CCDC90B-203ENST00000525503 HTN1P15515 57 aa12.11□□□□□ -0.47
CCDC90B-203ENST00000525503 ZNF415Q09FC8 603 aa12.11□□□□□ -0.47
CCDC90B-203ENST00000525503 DEFB114Q30KQ6 69 aa12.11□□□□□ -0.47
CCDC90B-203ENST00000525503 C12orf74Q32Q52 190 aa12.11□□□□□ -0.47
CCDC90B-203ENST00000525503 PTH2Q96A98 100 aa12.11□□□□□ -0.47
CCDC90B-203ENST00000525503 RAX2Q96IS3 184 aa12.11□□□□□ -0.47
CCDC90B-203ENST00000525503 A8MWV9 139 aa12.11□□□□□ -0.47
CCDC90B-203ENST00000525503 M0R2P5 195 aa12.11□□□□□ -0.47
CCDC90B-203ENST00000525503 LINC00467Q9BRT7 94 aa12.11□□□□□ -0.47
CCDC90B-203ENST00000525503 SCGB1D4Q6XE38 83 aa12.1□□□□□ -0.47
CCDC90B-203ENST00000525503 Q6ZSV7 163 aa12.1□□□□□ -0.47
CCDC90B-203ENST00000525503 C20orf203Q8NBC4 194 aa12.1□□□□□ -0.47
CCDC90B-203ENST00000525503 A0A1B0GWB2 263 aa12.09□□□□□ -0.47
CCDC90B-203ENST00000525503 K7ERU9 68 aa12.09□□□□□ -0.47
CCDC90B-203ENST00000525503 P0DMU3 169 aa12.09□□□□□ -0.47
CCDC90B-203ENST00000525503 FAM231AP0DMU4 169 aa12.09□□□□□ -0.47
CCDC90B-203ENST00000525503 FAM231CP0DMU5 169 aa12.09□□□□□ -0.47
CCDC90B-203ENST00000525503 EMP1P54849 157 aa12.09□□□□□ -0.47
CCDC90B-203ENST00000525503 TMEM170BQ5T4T1 132 aa12.09□□□□□ -0.47
CCDC90B-203ENST00000525503 NFE4Q86UQ8 179 aa12.09□□□□□ -0.47
CCDC90B-203ENST00000525503 PTPN13Q12923 2485 aa12.09□□□□□ -0.47
CCDC90B-203ENST00000525503 DNAJC9-AS1A6NH13 148 aa12.08□□□□□ -0.48
CCDC90B-203ENST00000525503 IGLL5B9A064 214 aa12.08□□□□□ -0.48
CCDC90B-203ENST00000525503 TRAV25A0A0B4J276 109 aa12.07□□□□□ -0.48
CCDC90B-203ENST00000525503 TMEM238LA0A1B0GVL6 79 aa12.07□□□□□ -0.48
CCDC90B-203ENST00000525503 A6NJY4 79 aa12.07□□□□□ -0.48
CCDC90B-203ENST00000525503 INSP01308 110 aa12.07□□□□□ -0.48
CCDC90B-203ENST00000525503 COTL1Q14019 142 aa12.07□□□□□ -0.48
CCDC90B-203ENST00000525503 ZNRF2Q8NHG8 242 aa12.07□□□□□ -0.48
CCDC90B-203ENST00000525503 CLUHP3Q96NS8 147 aa12.07□□□□□ -0.48
CCDC90B-203ENST00000525503 WFDC11Q8NEX6 87 aa12.07□□□□□ -0.48
CCDC90B-203ENST00000525503 LINC01587Q99440 93 aa12.07□□□□□ -0.48
CCDC90B-203ENST00000525503 SPXQ9BT56 116 aa12.07□□□□□ -0.48
CCDC90B-203ENST00000525503 EPG5Q9HCE0 2579 aa12.06□□□□□ -0.48
CCDC90B-203ENST00000525503 RNF151Q2KHN1 245 aa12.06□□□□□ -0.48
CCDC90B-203ENST00000525503 ZNF479Q96JC4 524 aa12.06□□□□□ -0.48
CCDC90B-203ENST00000525503 TNFRSF18Q9Y5U5 241 aa12.06□□□□□ -0.48
CCDC90B-203ENST00000525503 CREBBPQ92793 2442 aa12.06□□□□□ -0.48
CCDC90B-203ENST00000525503 IGHV3-73A0A0B4J1V6 119 aa12.05□□□□□ -0.48
CCDC90B-203ENST00000525503 SRSF9Q13242 221 aaKnown RBP eCLIP12.05□□□□□ -0.48
CCDC90B-203ENST00000525503 PLEKHB2Q96CS7 222 aa12.05□□□□□ -0.48
CCDC90B-203ENST00000525503 TEX15Q9BXT5 2789 aa12.05□□□□□ -0.48
CCDC90B-203ENST00000525503 DOPEY2Q9Y3R5 2298 aa12.05□□□□□ -0.48
CCDC90B-203ENST00000525503 AGRNO00468 2067 aa12.05□□□□□ -0.48
CCDC90B-203ENST00000525503 RHODO00212 210 aa12.05□□□□□ -0.48
CCDC90B-203ENST00000525503 VCX2Q9H322 139 aa12.05□□□□□ -0.48
CCDC90B-203ENST00000525503 PYGO1Q9Y3Y4 419 aa12.05□□□□□ -0.48
CCDC90B-203ENST00000525503 RRN3P1Q2M238 152 aa12.04□□□□□ -0.48
CCDC90B-203ENST00000525503 OPRPNQ99935 248 aaPredicted RBP12.04□□□□□ -0.48
CCDC90B-203ENST00000525503 ABCA12Q86UK0 2595 aa12.04□□□□□ -0.48
CCDC90B-203ENST00000525503 IGLV4-3A0A075B6K6 122 aa12.03□□□□□ -0.48
CCDC90B-203ENST00000525503 FHL3Q13643 280 aa12.03□□□□□ -0.48
CCDC90B-203ENST00000525503 CFAP126Q5VTH2 177 aa12.03□□□□□ -0.48
CCDC90B-203ENST00000525503 A0A0J9YY99 117 aa12.03□□□□□ -0.48
CCDC90B-203ENST00000525503 J3QQQ9 107 aa12.03□□□□□ -0.48
CCDC90B-203ENST00000525503 LGALS3P17931 250 aaKnown RBP12.03□□□□□ -0.48
CCDC90B-203ENST00000525503 CRYBA4P53673 196 aa12.03□□□□□ -0.48
CCDC90B-203ENST00000525503 C11orf72Q8NBR9 251 aa12.03□□□□□ -0.48
CCDC90B-203ENST00000525503 TMEM223A0PJW6 202 aa12.02□□□□□ -0.49
CCDC90B-203ENST00000525503 CCL24O00175 119 aa12.02□□□□□ -0.49
CCDC90B-203ENST00000525503 LEPROTO15243 131 aa12.02□□□□□ -0.49
CCDC90B-203ENST00000525503 CD28P10747 220 aa12.02□□□□□ -0.49
CCDC90B-203ENST00000525503 PROK1P58294 105 aa12.02□□□□□ -0.49
CCDC90B-203ENST00000525503 BEAN1Q3B7T3 259 aa12.02□□□□□ -0.49
CCDC90B-203ENST00000525503 DNAJC30Q96LL9 226 aa12.02□□□□□ -0.49
CCDC90B-203ENST00000525503 SPANXB1Q9NS25 103 aaPredicted RBP12.02□□□□□ -0.49
CCDC90B-203ENST00000525503 PRM2P04554 102 aa12.01□□□□□ -0.49
CCDC90B-203ENST00000525503 TSPEAR-AS2P59090 65 aa12.01□□□□□ -0.49
CCDC90B-203ENST00000525503 STHQ8IWL8 128 aa12.01□□□□□ -0.49
CCDC90B-203ENST00000525503 APCP25054 2843 aa12.01□□□□□ -0.49
CCDC90B-203ENST00000525503 ODF3L2Q3SX64 289 aa12.01□□□□□ -0.49
CCDC90B-203ENST00000525503 VPS25Q9BRG1 176 aa12.01□□□□□ -0.49
CCDC90B-203ENST00000525503 A0A1W2PRX2 142 aa12□□□□□ -0.49
CCDC90B-203ENST00000525503 HIST2H2BDQ6DRA6 164 aa12□□□□□ -0.49
CCDC90B-203ENST00000525503 SLC25A29Q8N8R3 303 aa12□□□□□ -0.49
CCDC90B-203ENST00000525503 ESM1Q9NQ30 184 aa12□□□□□ -0.49
CCDC90B-203ENST00000525503 RS1O15537 224 aa11.99□□□□□ -0.49
CCDC90B-203ENST00000525503 IGHV3-53P01767 116 aa11.99□□□□□ -0.49
CCDC90B-203ENST00000525503 ZNF22P17026 224 aaPredicted RBP11.99□□□□□ -0.49
CCDC90B-203ENST00000525503 UBE2D1P51668 147 aa11.99□□□□□ -0.49
CCDC90B-203ENST00000525503 Q6ZSN1 163 aa11.99□□□□□ -0.49
CCDC90B-203ENST00000525503 AMELXQ99217 191 aa11.99□□□□□ -0.49
CCDC90B-203ENST00000525503 MRPL16Q9NX20 251 aaKnown RBP11.99□□□□□ -0.49
CCDC90B-203ENST00000525503 A0A0J9YXV3 536 aa11.98□□□□□ -0.49
CCDC90B-203ENST00000525503 SAP30O75446 220 aa11.98□□□□□ -0.49
CCDC90B-203ENST00000525503 C11orf44Q8N8P7 122 aa11.98□□□□□ -0.49
CCDC90B-203ENST00000525503 SPANXA1Q9NS26 97 aa11.98□□□□□ -0.49
CCDC90B-203ENST00000525503 XCL2Q9UBD3 114 aa11.98□□□□□ -0.49
CCDC90B-203ENST00000525503 TSSC4Q9Y5U2 329 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 147.3 ms