RNA–Protein interactions for RNA: ENST00000525214.1

COPB1-203, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-203ENST00000525214 NPC2P61916 151 aa0.79□□□□□ -2.28
COPB1-203ENST00000525214 CCL8P80075 99 aa0.79□□□□□ -2.28
COPB1-203ENST00000525214 SSBP1Q04837 148 aaKnown RBP0.79□□□□□ -2.28
COPB1-203ENST00000525214 ZNF56Q15929 161 aa0.79□□□□□ -2.28
COPB1-203ENST00000525214 FAM74A4Q5TZK3 123 aa0.79□□□□□ -2.28
COPB1-203ENST00000525214 MRPL54Q6P161 138 aaKnown RBP0.79□□□□□ -2.28
COPB1-203ENST00000525214 ZNF818PQ6ZRF7 136 aa0.79□□□□□ -2.28
COPB1-203ENST00000525214 C5orf56Q8N8D9 126 aa0.79□□□□□ -2.28
COPB1-203ENST00000525214 C14orf144Q96I85 54 aa0.79□□□□□ -2.28
COPB1-203ENST00000525214 CNTRLQ7Z7A1 2325 aa0.78□□□□□ -2.28
COPB1-203ENST00000525214 RREB1Q92766 1687 aa0.78□□□□□ -2.28
COPB1-203ENST00000525214 BCORL1Q5H9F3 1711 aa0.78□□□□□ -2.28
COPB1-203ENST00000525214 AFDNP55196 1824 aaKnown RBP0.78□□□□□ -2.28
COPB1-203ENST00000525214 FXYD1O00168 92 aa0.78□□□□□ -2.28
COPB1-203ENST00000525214 CATR1Q13166 79 aa0.78□□□□□ -2.28
COPB1-203ENST00000525214 SPINK13Q1W4C9 94 aa0.78□□□□□ -2.28
COPB1-203ENST00000525214 GTF2H5Q6ZYL4 71 aa0.78□□□□□ -2.28
COPB1-203ENST00000525214 Q86TA4 180 aa0.78□□□□□ -2.28
COPB1-203ENST00000525214 SPTSSBQ8NFR3 76 aa0.78□□□□□ -2.28
COPB1-203ENST00000525214 LINC00208Q96KT6 92 aa0.78□□□□□ -2.28
COPB1-203ENST00000525214 TMEM14BQ9NUH8 114 aa0.78□□□□□ -2.28
COPB1-203ENST00000525214 CUL7Q14999 1698 aa0.78□□□□□ -2.29
COPB1-203ENST00000525214 MUC22E2RYF6 1773 aaPredicted RBP0.78□□□□□ -2.29
COPB1-203ENST00000525214 MYH8P13535 1937 aa0.77□□□□□ -2.29
COPB1-203ENST00000525214 NAV3Q8IVL0 2385 aa0.77□□□□□ -2.29
COPB1-203ENST00000525214 TRBV7-1A0A0A6YYK4 115 aa0.77□□□□□ -2.29
COPB1-203ENST00000525214 CCL3L1P16619 93 aa0.77□□□□□ -2.29
COPB1-203ENST00000525214 RBM3P98179 157 aaKnown RBP0.77□□□□□ -2.29
COPB1-203ENST00000525214 C9orf153Q5TBE3 101 aa0.77□□□□□ -2.29
COPB1-203ENST00000525214 C20orf197Q8N268 126 aa0.77□□□□□ -2.29
COPB1-203ENST00000525214 SVBPQ8N300 66 aa0.77□□□□□ -2.29
COPB1-203ENST00000525214 Q8N8P6 123 aa0.77□□□□□ -2.29
COPB1-203ENST00000525214 COX7B2Q8TF08 81 aa0.77□□□□□ -2.29
COPB1-203ENST00000525214 C10orf82Q8WW14 230 aa0.77□□□□□ -2.29
COPB1-203ENST00000525214 QRICH2Q9H0J4 1663 aa0.77□□□□□ -2.29
COPB1-203ENST00000525214 RBBP6Q7Z6E9 1792 aaKnown RBP0.76□□□□□ -2.29
COPB1-203ENST00000525214 NWD2Q9ULI1 1742 aa0.76□□□□□ -2.29
COPB1-203ENST00000525214 NRKQ7Z2Y5 1582 aa0.76□□□□□ -2.29
COPB1-203ENST00000525214 TRAV13-2A0A0B4J235 113 aa0.76□□□□□ -2.29
COPB1-203ENST00000525214 FAM24AA6NFZ4 105 aa0.76□□□□□ -2.29
COPB1-203ENST00000525214 OOSP1A8MZH6 123 aa0.76□□□□□ -2.29
COPB1-203ENST00000525214 SSSCA1O60232 199 aa0.76□□□□□ -2.29
COPB1-203ENST00000525214 SIX6O95475 246 aa0.76□□□□□ -2.29
COPB1-203ENST00000525214 SMIM6P0DI80 62 aa0.76□□□□□ -2.29
COPB1-203ENST00000525214 RBP2P50120 134 aa0.76□□□□□ -2.29
COPB1-203ENST00000525214 UBE2D1P51668 147 aa0.76□□□□□ -2.29
COPB1-203ENST00000525214 ATP5EP56381 51 aaPredicted RBP0.76□□□□□ -2.29
COPB1-203ENST00000525214 INSL4Q14641 139 aa0.76□□□□□ -2.29
COPB1-203ENST00000525214 AQP10Q96PS8 301 aa0.76□□□□□ -2.29
COPB1-203ENST00000525214 DSCR8Q96T75 97 aa0.76□□□□□ -2.29
COPB1-203ENST00000525214 ZNF469Q96JG9 3925 aaPredicted RBP0.76□□□□□ -2.29
COPB1-203ENST00000525214 PZPP20742 1482 aa0.75□□□□□ -2.29
COPB1-203ENST00000525214 PXDNQ92626 1479 aa0.75□□□□□ -2.29
COPB1-203ENST00000525214 MRC2Q9UBG0 1479 aa0.75□□□□□ -2.29
COPB1-203ENST00000525214 CPSF1Q10570 1443 aaKnown RBP0.75□□□□□ -2.29
COPB1-203ENST00000525214 UBE2L5PA0A1B0GUS4 154 aa0.75□□□□□ -2.29
COPB1-203ENST00000525214 HCG22E2RYF7 251 aa0.75□□□□□ -2.29
COPB1-203ENST00000525214 IFITM1P13164 125 aa0.75□□□□□ -2.29
COPB1-203ENST00000525214 UBE2L3P68036 154 aaKnown RBP0.75□□□□□ -2.29
COPB1-203ENST00000525214 C5orf38Q86SI9 138 aa0.75□□□□□ -2.29
COPB1-203ENST00000525214 CYP4F30PQ9H0H9 118 aa0.75□□□□□ -2.29
COPB1-203ENST00000525214 V9GYV3 84 aa0.75□□□□□ -2.29
COPB1-203ENST00000525214 PLXNA1Q9UIW2 1896 aa0.75□□□□□ -2.29
COPB1-203ENST00000525214 PARP14Q460N5 1801 aa0.75□□□□□ -2.29
COPB1-203ENST00000525214 NRXN2Q9P2S2 1712 aa0.75□□□□□ -2.29
COPB1-203ENST00000525214 LRRC37A3O60309 1634 aa0.75□□□□□ -2.29
COPB1-203ENST00000525214 CADP27708 2225 aa0.74□□□□□ -2.29
COPB1-203ENST00000525214 ARFGEF1Q9Y6D6 1849 aa0.74□□□□□ -2.29
COPB1-203ENST00000525214 TMEM218A2RU14 115 aa0.74□□□□□ -2.29
COPB1-203ENST00000525214 K7EIL1 84 aa0.74□□□□□ -2.29
COPB1-203ENST00000525214 EDDM3BP56851 147 aa0.74□□□□□ -2.29
COPB1-203ENST00000525214 ELOF1P60002 83 aaKnown RBP0.74□□□□□ -2.29
COPB1-203ENST00000525214 DCDP81605 110 aaKnown RBP0.74□□□□□ -2.29
COPB1-203ENST00000525214 HSD52Q0P140 79 aa0.74□□□□□ -2.29
COPB1-203ENST00000525214 COMMD6Q7Z4G1 85 aa0.74□□□□□ -2.29
COPB1-203ENST00000525214 Q8N6K4 173 aa0.74□□□□□ -2.29
COPB1-203ENST00000525214 ACBD7Q8N6N7 88 aa0.74□□□□□ -2.29
COPB1-203ENST00000525214 PLAC4Q8WY50 150 aa0.74□□□□□ -2.29
COPB1-203ENST00000525214 SCP2D1Q9UJQ7 156 aa0.74□□□□□ -2.29
COPB1-203ENST00000525214 DOCK1Q14185 1865 aa0.73□□□□□ -2.29
COPB1-203ENST00000525214 AHCTF1Q8WYP5 2266 aa0.73□□□□□ -2.29
COPB1-203ENST00000525214 PPIP5K1Q6PFW1 1433 aa0.73□□□□□ -2.29
COPB1-203ENST00000525214 CASKIN1Q8WXD9 1431 aa0.73□□□□□ -2.29
COPB1-203ENST00000525214 PHIPQ8WWQ0 1821 aa0.73□□□□□ -2.29
COPB1-203ENST00000525214 JMJD1CQ15652 2540 aa0.73□□□□□ -2.29
COPB1-203ENST00000525214 ZNF462Q96JM2 2506 aa0.73□□□□□ -2.29
COPB1-203ENST00000525214 A0A096LNT2 108 aa0.73□□□□□ -2.29
COPB1-203ENST00000525214 H3BQ15 152 aa0.73□□□□□ -2.29
COPB1-203ENST00000525214 SPINK8P0C7L1 97 aa0.73□□□□□ -2.29
COPB1-203ENST00000525214 MYOZ3Q8TDC0 251 aa0.73□□□□□ -2.29
COPB1-203ENST00000525214 LINC00312Q9Y6C7 94 aa0.73□□□□□ -2.29
COPB1-203ENST00000525214 PATJQ8NI35 1801 aa0.73□□□□□ -2.29
COPB1-203ENST00000525214 VPS8Q8N3P4 1428 aa0.72□□□□□ -2.29
COPB1-203ENST00000525214 ASXL3Q9C0F0 2248 aa0.72□□□□□ -2.29
COPB1-203ENST00000525214 TRAV30A0A087WSZ9 112 aa0.72□□□□□ -2.29
COPB1-203ENST00000525214 S100A8P05109 93 aa0.72□□□□□ -2.29
COPB1-203ENST00000525214 RPL37P61927 97 aaKnown RBP0.72□□□□□ -2.29
COPB1-203ENST00000525214 C10orf128Q5T292 105 aa0.72□□□□□ -2.29
COPB1-203ENST00000525214 TTC9CQ8N5M4 171 aa0.72□□□□□ -2.29
COPB1-203ENST00000525214 DPH3P1Q9H4G8 78 aa0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms