RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 TRBV10-1A0A0K0K1A3 114 aa7.22□□□□□ -1.25
VPS13B-212ENST00000524330 PAPPA-AS1Q5QFB9 102 aa7.22□□□□□ -1.25
VPS13B-212ENST00000524330 ZNF664Q8N3J9 261 aa7.22□□□□□ -1.25
VPS13B-212ENST00000524330 CSNK1G2-AS1Q8NCQ2 148 aa7.22□□□□□ -1.25
VPS13B-212ENST00000524330 IL17DQ8TAD2 202 aa7.22□□□□□ -1.25
VPS13B-212ENST00000524330 TOMM6Q96B49 74 aa7.22□□□□□ -1.25
VPS13B-212ENST00000524330 TMEM141Q96I45 108 aa7.22□□□□□ -1.25
VPS13B-212ENST00000524330 PAM16Q9Y3D7 125 aa7.22□□□□□ -1.25
VPS13B-212ENST00000524330 A0A096LNJ9 63 aa7.21□□□□□ -1.26
VPS13B-212ENST00000524330 GIG44P09565 113 aaPredicted RBP7.21□□□□□ -1.26
VPS13B-212ENST00000524330 RPL36AP83881 106 aaKnown RBP7.21□□□□□ -1.26
VPS13B-212ENST00000524330 CDPF1Q6NVV7 123 aa7.21□□□□□ -1.26
VPS13B-212ENST00000524330 C2orf66Q6UXQ4 117 aa7.21□□□□□ -1.26
VPS13B-212ENST00000524330 ERASQ7Z444 233 aa7.21□□□□□ -1.26
VPS13B-212ENST00000524330 Q8N976 141 aa7.21□□□□□ -1.26
VPS13B-212ENST00000524330 RPL36ALQ969Q0 106 aaKnown RBP7.21□□□□□ -1.26
VPS13B-212ENST00000524330 C18orf15Q96N68 181 aa7.21□□□□□ -1.26
VPS13B-212ENST00000524330 PRO1933Q9H354 126 aa7.21□□□□□ -1.26
VPS13B-212ENST00000524330 NOP10Q9NPE3 64 aaKnown RBP7.21□□□□□ -1.26
VPS13B-212ENST00000524330 IGHV3-73A0A0B4J1V6 119 aa7.2□□□□□ -1.26
VPS13B-212ENST00000524330 TRAV12-1A0A0B4J245 112 aa7.2□□□□□ -1.26
VPS13B-212ENST00000524330 DDTP30046 118 aa7.2□□□□□ -1.26
VPS13B-212ENST00000524330 RIPPLY3P57055 190 aa7.2□□□□□ -1.26
VPS13B-212ENST00000524330 DEFA6Q01524 100 aa7.2□□□□□ -1.26
VPS13B-212ENST00000524330 UFSP1Q6NVU6 142 aa7.2□□□□□ -1.26
VPS13B-212ENST00000524330 LINC00173Q6ZV60 143 aa7.2□□□□□ -1.26
VPS13B-212ENST00000524330 PMCHL2Q9BQD1 86 aa7.2□□□□□ -1.26
VPS13B-212ENST00000524330 UQCR10Q9UDW1 63 aa7.2□□□□□ -1.26
VPS13B-212ENST00000524330 TRGV4A0A0C4DH28 118 aa7.19□□□□□ -1.26
VPS13B-212ENST00000524330 TEX48A0A1B0GUV7 120 aa7.19□□□□□ -1.26
VPS13B-212ENST00000524330 GAGE12BA1L429 117 aa7.19□□□□□ -1.26
VPS13B-212ENST00000524330 LYRM9A8MSI8 78 aa7.19□□□□□ -1.26
VPS13B-212ENST00000524330 K7EQD1 137 aa7.19□□□□□ -1.26
VPS13B-212ENST00000524330 GAGE7O76087 117 aa7.19□□□□□ -1.26
VPS13B-212ENST00000524330 GAGE12FP0CL80 117 aa7.19□□□□□ -1.26
VPS13B-212ENST00000524330 GAGE12GP0CL81 117 aa7.19□□□□□ -1.26
VPS13B-212ENST00000524330 GAGE12IP0CL82 117 aa7.19□□□□□ -1.26
VPS13B-212ENST00000524330 PLNP26678 52 aa7.19□□□□□ -1.26
VPS13B-212ENST00000524330 COTL1Q14019 142 aa7.19□□□□□ -1.26
VPS13B-212ENST00000524330 TIMM17AQ99595 171 aa7.19□□□□□ -1.26
VPS13B-212ENST00000524330 MIEN1Q9BRT3 115 aa7.19□□□□□ -1.26
VPS13B-212ENST00000524330 PRADC1Q9BSG0 188 aa7.19□□□□□ -1.26
VPS13B-212ENST00000524330 SETXQ7Z333 2677 aaKnown RBP7.19□□□□□ -1.26
VPS13B-212ENST00000524330 A0A087WX48 190 aa7.18□□□□□ -1.26
VPS13B-212ENST00000524330 DPM2O94777 84 aa7.18□□□□□ -1.26
VPS13B-212ENST00000524330 IGKCP01834 107 aa7.18□□□□□ -1.26
VPS13B-212ENST00000524330 PRM2P04554 102 aa7.18□□□□□ -1.26
VPS13B-212ENST00000524330 NPSP0C0P6 89 aa7.18□□□□□ -1.26
VPS13B-212ENST00000524330 MIFP14174 115 aa7.18□□□□□ -1.26
VPS13B-212ENST00000524330 TMEM97Q5BJF2 176 aa7.18□□□□□ -1.26
VPS13B-212ENST00000524330 Q6ZTI0 123 aa7.18□□□□□ -1.26
VPS13B-212ENST00000524330 DAZ4Q86SG3 579 aaKnown RBP7.18□□□□□ -1.26
VPS13B-212ENST00000524330 ATOH7Q8N100 152 aa7.18□□□□□ -1.26
VPS13B-212ENST00000524330 DAZ3Q9NR90 486 aaKnown RBP7.18□□□□□ -1.26
VPS13B-212ENST00000524330 TP53TG1Q9Y2A0 90 aa7.18□□□□□ -1.26
VPS13B-212ENST00000524330 TRBV7-3A0A075B6L6 115 aa7.17□□□□□ -1.26
VPS13B-212ENST00000524330 TRBV6-4A0A1B0GX49 114 aa7.17□□□□□ -1.26
VPS13B-212ENST00000524330 A8MZ25 164 aa7.17□□□□□ -1.26
VPS13B-212ENST00000524330 MRPL52Q86TS9 123 aaKnown RBP7.17□□□□□ -1.26
VPS13B-212ENST00000524330 PRIMA1Q86XR5 153 aa7.17□□□□□ -1.26
VPS13B-212ENST00000524330 NEXN-AS1Q8NBZ9 246 aa7.17□□□□□ -1.26
VPS13B-212ENST00000524330 CHTOPQ9Y3Y2 248 aaKnown RBP7.17□□□□□ -1.26
VPS13B-212ENST00000524330 F8VRH5 84 aa7.16□□□□□ -1.26
VPS13B-212ENST00000524330 IGHV4-30-4P0DP06 118 aa7.16□□□□□ -1.26
VPS13B-212ENST00000524330 CRYBA4P53673 196 aa7.16□□□□□ -1.26
VPS13B-212ENST00000524330 EMP1P54849 157 aa7.16□□□□□ -1.26
VPS13B-212ENST00000524330 EGFEM1PQ0D2K5 195 aa7.16□□□□□ -1.26
VPS13B-212ENST00000524330 PMVKQ15126 192 aa7.16□□□□□ -1.26
VPS13B-212ENST00000524330 NEGR1Q7Z3B1 354 aa7.16□□□□□ -1.26
VPS13B-212ENST00000524330 C20orf203Q8NBC4 194 aa7.16□□□□□ -1.26
VPS13B-212ENST00000524330 OR11H2Q8NH07 326 aa7.16□□□□□ -1.26
VPS13B-212ENST00000524330 ZMAT4Q9H898 229 aa7.16□□□□□ -1.26
VPS13B-212ENST00000524330 SETD2Q9BYW2 2564 aaPredicted RBP7.15□□□□□ -1.26
VPS13B-212ENST00000524330 FLNBO75369 2602 aaKnown RBP7.15□□□□□ -1.26
VPS13B-212ENST00000524330 NF1P21359 2839 aa7.15□□□□□ -1.26
VPS13B-212ENST00000524330 TSHBP01222 138 aa7.15□□□□□ -1.26
VPS13B-212ENST00000524330 IGLC3P0DOY3 106 aa7.15□□□□□ -1.26
VPS13B-212ENST00000524330 HNRNPA3P51991 378 aaKnown RBP7.15□□□□□ -1.26
VPS13B-212ENST00000524330 HERVK_113P61574 105 aa7.15□□□□□ -1.26
VPS13B-212ENST00000524330 ODF1Q14990 250 aa7.15□□□□□ -1.26
VPS13B-212ENST00000524330 DEFB135Q30KP9 77 aa7.15□□□□□ -1.26
VPS13B-212ENST00000524330 SLC25A34Q6PIV7 304 aa7.15□□□□□ -1.26
VPS13B-212ENST00000524330 ZNRF2Q8NHG8 242 aa7.15□□□□□ -1.26
VPS13B-212ENST00000524330 RNF183Q96D59 192 aa7.15□□□□□ -1.26
VPS13B-212ENST00000524330 ZNF479Q96JC4 524 aa7.15□□□□□ -1.26
VPS13B-212ENST00000524330 SPANXA1Q9NS26 97 aa7.15□□□□□ -1.26
VPS13B-212ENST00000524330 PYGO1Q9Y3Y4 419 aa7.15□□□□□ -1.26
VPS13B-212ENST00000524330 PLAC8L1A1L4L8 177 aa7.14□□□□□ -1.27
VPS13B-212ENST00000524330 DGAT2L7PQ6IED9 249 aa7.14□□□□□ -1.27
VPS13B-212ENST00000524330 LINC00612Q8N6U2 182 aa7.14□□□□□ -1.27
VPS13B-212ENST00000524330 SPATA3Q8NHX4 192 aa7.14□□□□□ -1.27
VPS13B-212ENST00000524330 BAALCQ8WXS3 180 aa7.14□□□□□ -1.27
VPS13B-212ENST00000524330 VCX2Q9H322 139 aa7.14□□□□□ -1.27
VPS13B-212ENST00000524330 BAHCC1Q9P281 2608 aa7.14□□□□□ -1.27
VPS13B-212ENST00000524330 X6R8D5 127 aa7.14□□□□□ -1.27
VPS13B-212ENST00000524330 hDV102S1A0JD36 115 aa7.13□□□□□ -1.27
VPS13B-212ENST00000524330 IGIPA6NJ69 53 aa7.13□□□□□ -1.27
VPS13B-212ENST00000524330 LINC00587B1AMM8 73 aa7.13□□□□□ -1.27
VPS13B-212ENST00000524330 UBE2L6O14933 153 aa7.13□□□□□ -1.27
VPS13B-212ENST00000524330 SPART-AS1P0CW21 52 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms