RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 ACACBO00763 2458 aa8.16□□□□□ -1.1
HDAC9-228ENST00000524023 I3L3M4 83 aa8.15□□□□□ -1.1
HDAC9-228ENST00000524023 RBMY1A1P0DJD3 496 aaKnown RBP8.15□□□□□ -1.1
HDAC9-228ENST00000524023 RBMY1CP0DJD4 496 aa8.15□□□□□ -1.1
HDAC9-228ENST00000524023 RBMY1FQ15415 496 aaKnown RBP8.15□□□□□ -1.1
HDAC9-228ENST00000524023 ETDBQ3ZM63 59 aa8.15□□□□□ -1.1
HDAC9-228ENST00000524023 Q6YL49 198 aa8.15□□□□□ -1.1
HDAC9-228ENST00000524023 SH2D6Q7Z4S9 175 aa8.15□□□□□ -1.1
HDAC9-228ENST00000524023 MTURNQ8N3F0 131 aa8.15□□□□□ -1.1
HDAC9-228ENST00000524023 AMELXQ99217 191 aa8.15□□□□□ -1.1
HDAC9-228ENST00000524023 J3QQQ9 107 aa8.15□□□□□ -1.11
HDAC9-228ENST00000524023 TSPAN13O95857 204 aa8.15□□□□□ -1.11
HDAC9-228ENST00000524023 FSHBP01225 129 aa8.15□□□□□ -1.11
HDAC9-228ENST00000524023 IGHV3-30P01768 117 aa8.15□□□□□ -1.11
HDAC9-228ENST00000524023 IGHV3-30-5P0DP03 117 aa8.15□□□□□ -1.11
HDAC9-228ENST00000524023 TCTEX1D4Q5JR98 221 aa8.15□□□□□ -1.11
HDAC9-228ENST00000524023 SLC25A29Q8N8R3 303 aa8.15□□□□□ -1.11
HDAC9-228ENST00000524023 APOMO95445 188 aa8.14□□□□□ -1.11
HDAC9-228ENST00000524023 KNCNA6PVL3 124 aa8.14□□□□□ -1.11
HDAC9-228ENST00000524023 NDUFA11Q86Y39 141 aa8.14□□□□□ -1.11
HDAC9-228ENST00000524023 TEX15Q9BXT5 2789 aa8.13□□□□□ -1.11
HDAC9-228ENST00000524023 TMEM223A0PJW6 202 aa8.13□□□□□ -1.11
HDAC9-228ENST00000524023 J3QR89 54 aa8.13□□□□□ -1.11
HDAC9-228ENST00000524023 LGALS3P17931 250 aaKnown RBP8.13□□□□□ -1.11
HDAC9-228ENST00000524023 SLURP1P55000 103 aa8.13□□□□□ -1.11
HDAC9-228ENST00000524023 DLX4Q92988 240 aaPredicted RBP8.13□□□□□ -1.11
HDAC9-228ENST00000524023 EDA2RQ9HAV5 297 aa8.13□□□□□ -1.11
HDAC9-228ENST00000524023 BEX4Q9NWD9 120 aaPredicted RBP8.13□□□□□ -1.11
HDAC9-228ENST00000524023 FAM208BQ5VWN6 2430 aa8.13□□□□□ -1.11
HDAC9-228ENST00000524023 IGLV4-3A0A075B6K6 122 aa8.12□□□□□ -1.11
HDAC9-228ENST00000524023 LEPROTO15243 131 aa8.12□□□□□ -1.11
HDAC9-228ENST00000524023 HTN1P15515 57 aa8.12□□□□□ -1.11
HDAC9-228ENST00000524023 DEFB131AP59861 70 aa8.12□□□□□ -1.11
HDAC9-228ENST00000524023 UBE2D3P61077 147 aa8.12□□□□□ -1.11
HDAC9-228ENST00000524023 UBE2D2P62837 147 aa8.12□□□□□ -1.11
HDAC9-228ENST00000524023 DEFB136Q30KP8 78 aa8.12□□□□□ -1.11
HDAC9-228ENST00000524023 C18orf65Q6ZTR6 163 aa8.12□□□□□ -1.11
HDAC9-228ENST00000524023 SPAG8Q99932 426 aaPredicted RBP8.12□□□□□ -1.11
HDAC9-228ENST00000524023 CR1P17927 2039 aa8.12□□□□□ -1.11
HDAC9-228ENST00000524023 AKAP9Q99996 3911 aa8.12□□□□□ -1.11
HDAC9-228ENST00000524023 LRRK2Q5S007 2527 aa8.12□□□□□ -1.11
HDAC9-228ENST00000524023 LOC107984156A0A0G2JMH3 177 aa8.12□□□□□ -1.11
HDAC9-228ENST00000524023 A8MTW9 85 aa8.12□□□□□ -1.11
HDAC9-228ENST00000524023 RHODO00212 210 aa8.12□□□□□ -1.11
HDAC9-228ENST00000524023 CFC1BP0CG36 223 aa8.12□□□□□ -1.11
HDAC9-228ENST00000524023 CFC1P0CG37 223 aa8.12□□□□□ -1.11
HDAC9-228ENST00000524023 ZNF22P17026 224 aaPredicted RBP8.12□□□□□ -1.11
HDAC9-228ENST00000524023 SFTA2Q6UW10 78 aa8.12□□□□□ -1.11
HDAC9-228ENST00000524023 ARL17AQ8IVW1 177 aa8.12□□□□□ -1.11
HDAC9-228ENST00000524023 IGHV3-73A0A0B4J1V6 119 aa8.11□□□□□ -1.11
HDAC9-228ENST00000524023 H3BMM0 161 aa8.11□□□□□ -1.11
HDAC9-228ENST00000524023 IGHV4-31P0DP07 118 aa8.11□□□□□ -1.11
HDAC9-228ENST00000524023 CFAP126Q5VTH2 177 aa8.11□□□□□ -1.11
HDAC9-228ENST00000524023 VCX2Q9H322 139 aa8.11□□□□□ -1.11
HDAC9-228ENST00000524023 TSSC4Q9Y5U2 329 aaPredicted RBP8.11□□□□□ -1.11
HDAC9-228ENST00000524023 NACAE9PAV3 2078 aa8.11□□□□□ -1.11
HDAC9-228ENST00000524023 A0A0J9YXV3 536 aa8.11□□□□□ -1.11
HDAC9-228ENST00000524023 RBMY1BA6NDE4 496 aaKnown RBP8.11□□□□□ -1.11
HDAC9-228ENST00000524023 RBMY1EA6NEQ0 496 aaKnown RBP8.11□□□□□ -1.11
HDAC9-228ENST00000524023 RBMY1DP0C7P1 496 aaKnown RBP8.11□□□□□ -1.11
HDAC9-228ENST00000524023 PSMB2P49721 201 aa8.11□□□□□ -1.11
HDAC9-228ENST00000524023 PROK1P58294 105 aa8.11□□□□□ -1.11
HDAC9-228ENST00000524023 MYO9AB2RTY4 2548 aa8.1□□□□□ -1.11
HDAC9-228ENST00000524023 PRM2P04554 102 aa8.1□□□□□ -1.11
HDAC9-228ENST00000524023 SMCPP49901 116 aaPredicted RBP8.1□□□□□ -1.11
HDAC9-228ENST00000524023 Q5PR19 223 aa8.1□□□□□ -1.11
HDAC9-228ENST00000524023 PYGO1Q9Y3Y4 419 aa8.1□□□□□ -1.11
HDAC9-228ENST00000524023 ZFYVE26Q68DK2 2539 aa8.1□□□□□ -1.11
HDAC9-228ENST00000524023 GAGE12HA6NDE8 117 aa8.1□□□□□ -1.11
HDAC9-228ENST00000524023 INSL3P51460 131 aa8.1□□□□□ -1.11
HDAC9-228ENST00000524023 LYRM7Q5U5X0 104 aa8.1□□□□□ -1.11
HDAC9-228ENST00000524023 C10orf126Q8N4M7 172 aa8.1□□□□□ -1.11
HDAC9-228ENST00000524023 FAM104AQ969W3 186 aa8.1□□□□□ -1.11
HDAC9-228ENST00000524023 DUX3Q96PT4 197 aa8.1□□□□□ -1.11
HDAC9-228ENST00000524023 PTPN13Q12923 2485 aa8.09□□□□□ -1.11
HDAC9-228ENST00000524023 ZNF462Q96JM2 2506 aa8.09□□□□□ -1.11
HDAC9-228ENST00000524023 UBR5O95071 2799 aaPredicted RBP8.09□□□□□ -1.11
HDAC9-228ENST00000524023 IGHV3-64A0A075B6Q5 118 aa8.09□□□□□ -1.11
HDAC9-228ENST00000524023 TRAV2A0A0B4J234 112 aa8.09□□□□□ -1.11
HDAC9-228ENST00000524023 A8MWV9 139 aa8.09□□□□□ -1.11
HDAC9-228ENST00000524023 TMEM238C9JI98 176 aa8.09□□□□□ -1.11
HDAC9-228ENST00000524023 M0R2P5 195 aa8.09□□□□□ -1.11
HDAC9-228ENST00000524023 PRRC2AP48634 2157 aaKnown RBP8.09□□□□□ -1.12
HDAC9-228ENST00000524023 CD28P10747 220 aa8.08□□□□□ -1.12
HDAC9-228ENST00000524023 TMEM61Q8N0U2 210 aa8.08□□□□□ -1.12
HDAC9-228ENST00000524023 Q8N2B8 174 aa8.08□□□□□ -1.12
HDAC9-228ENST00000524023 SIGMAR1Q99720 223 aa8.08□□□□□ -1.12
HDAC9-228ENST00000524023 SPATA25Q9BR10 227 aa8.08□□□□□ -1.12
HDAC9-228ENST00000524023 PRO1854Q9UHT4 67 aa8.08□□□□□ -1.12
HDAC9-228ENST00000524023 TNFRSF18Q9Y5U5 241 aa8.08□□□□□ -1.12
HDAC9-228ENST00000524023 ABCA12Q86UK0 2595 aa8.08□□□□□ -1.12
HDAC9-228ENST00000524023 TCL1BO95988 128 aa8.08□□□□□ -1.12
HDAC9-228ENST00000524023 PIK3CD-AS1Q5SR53 167 aa8.08□□□□□ -1.12
HDAC9-228ENST00000524023 ATP6V0E2Q8NHE4 81 aa8.08□□□□□ -1.12
HDAC9-228ENST00000524023 GTSF1LQ9H1H1 148 aa8.08□□□□□ -1.12
HDAC9-228ENST00000524023 PEMTQ9UBM1 199 aa8.08□□□□□ -1.12
HDAC9-228ENST00000524023 Q9UF83 564 aa8.08□□□□□ -1.12
HDAC9-228ENST00000524023 A4D1N5 150 aa8.07□□□□□ -1.12
HDAC9-228ENST00000524023 AZU1P20160 251 aa8.07□□□□□ -1.12
HDAC9-228ENST00000524023 CRYBA4P53673 196 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms