RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 IGHV1-3A0A0C4DH29 117 aa6.31□□□□□ -1.4
CSMD1-213ENST00000523488 TIMM17BO60830 172 aa6.31□□□□□ -1.4
CSMD1-213ENST00000523488 NPC2P61916 151 aa6.31□□□□□ -1.4
CSMD1-213ENST00000523488 ITLN2Q8WWU7 325 aaPredicted RBP6.31□□□□□ -1.4
CSMD1-213ENST00000523488 USP9YO00507 2555 aaPredicted RBP6.31□□□□□ -1.4
CSMD1-213ENST00000523488 IGHV1-8P0DP01 117 aa6.3□□□□□ -1.4
CSMD1-213ENST00000523488 POLR2KP53803 58 aaKnown RBP6.3□□□□□ -1.4
CSMD1-213ENST00000523488 LINC00643Q86TS7 51 aa6.3□□□□□ -1.4
CSMD1-213ENST00000523488 Q8N6K4 173 aa6.3□□□□□ -1.4
CSMD1-213ENST00000523488 FAM104AQ969W3 186 aa6.3□□□□□ -1.4
CSMD1-213ENST00000523488 OBSCN-AS1Q96MR7 158 aa6.3□□□□□ -1.4
CSMD1-213ENST00000523488 FANCD2OSQ96PS1 177 aa6.3□□□□□ -1.4
CSMD1-213ENST00000523488 hADV29S1A0JD25 119 aa6.3□□□□□ -1.4
CSMD1-213ENST00000523488 MBD3L4A6NDZ8 208 aaPredicted RBP6.3□□□□□ -1.4
CSMD1-213ENST00000523488 MBD3L3A6NE82 208 aaPredicted RBP6.3□□□□□ -1.4
CSMD1-213ENST00000523488 MBD3L5A6NJ08 208 aaPredicted RBP6.3□□□□□ -1.4
CSMD1-213ENST00000523488 UBE2E1P51965 193 aa6.3□□□□□ -1.4
CSMD1-213ENST00000523488 MBD3L2Q8NHZ7 208 aaPredicted RBP6.3□□□□□ -1.4
CSMD1-213ENST00000523488 MAP1AP78559 2803 aaPredicted RBP6.3□□□□□ -1.4
CSMD1-213ENST00000523488 LEPROTO15243 131 aa6.3□□□□□ -1.4
CSMD1-213ENST00000523488 COX7CP15954 63 aa6.3□□□□□ -1.4
CSMD1-213ENST00000523488 EEF1AKMT3Q96AZ1 226 aa6.3□□□□□ -1.4
CSMD1-213ENST00000523488 IGHV3-49A0A0A0MS15 119 aa6.29□□□□□ -1.4
CSMD1-213ENST00000523488 LST1O00453 97 aa6.29□□□□□ -1.4
CSMD1-213ENST00000523488 FAM27E3Q08E93 113 aa6.29□□□□□ -1.4
CSMD1-213ENST00000523488 DUX5Q96PT3 197 aa6.29□□□□□ -1.4
CSMD1-213ENST00000523488 A0A0J9YXY3 114 aa6.29□□□□□ -1.4
CSMD1-213ENST00000523488 LOXP28300 417 aaPredicted RBP6.29□□□□□ -1.4
CSMD1-213ENST00000523488 RPL39P62891 51 aaKnown RBP6.29□□□□□ -1.4
CSMD1-213ENST00000523488 FAM19A3Q7Z5A8 133 aa6.29□□□□□ -1.4
CSMD1-213ENST00000523488 ADARB2-AS1A8MUL3 147 aa6.29□□□□□ -1.4
CSMD1-213ENST00000523488 NSUN5P1Q3KNT7 163 aa6.29□□□□□ -1.4
CSMD1-213ENST00000523488 LYPD2Q6UXB3 125 aa6.29□□□□□ -1.4
CSMD1-213ENST00000523488 FAM222AQ5U5X8 452 aa6.28□□□□□ -1.4
CSMD1-213ENST00000523488 ASCL5Q7RTU5 278 aa6.28□□□□□ -1.4
CSMD1-213ENST00000523488 VCYO14598 125 aa6.28□□□□□ -1.4
CSMD1-213ENST00000523488 WNK1Q9H4A3 2382 aa6.28□□□□□ -1.4
CSMD1-213ENST00000523488 ATOX1O00244 68 aa6.28□□□□□ -1.4
CSMD1-213ENST00000523488 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.28□□□□□ -1.4
CSMD1-213ENST00000523488 LY6G5BQ8NDX9 201 aa6.28□□□□□ -1.4
CSMD1-213ENST00000523488 BOD1L1Q8NFC6 3051 aa6.28□□□□□ -1.4
CSMD1-213ENST00000523488 CLPSL1A2RUU4 121 aa6.27□□□□□ -1.41
CSMD1-213ENST00000523488 SEM1Q6ZVN7 128 aa6.27□□□□□ -1.41
CSMD1-213ENST00000523488 C16orf92Q96LL3 132 aa6.27□□□□□ -1.41
CSMD1-213ENST00000523488 NACAE9PAV3 2078 aa6.27□□□□□ -1.41
CSMD1-213ENST00000523488 TRBV27A0A0K0K1C4 114 aa6.27□□□□□ -1.41
CSMD1-213ENST00000523488 HRCT1Q6UXD1 115 aa6.27□□□□□ -1.41
CSMD1-213ENST00000523488 RNASE4P34096 147 aaKnown RBP6.27□□□□□ -1.41
CSMD1-213ENST00000523488 BUB1B-PAK6H3BSN5 160 aa6.26□□□□□ -1.41
CSMD1-213ENST00000523488 SOCS3O14543 225 aa6.26□□□□□ -1.41
CSMD1-213ENST00000523488 Q5XG85 94 aa6.26□□□□□ -1.41
CSMD1-213ENST00000523488 SMCR5Q8TEV8 140 aa6.26□□□□□ -1.41
CSMD1-213ENST00000523488 PEMTQ9UBM1 199 aa6.26□□□□□ -1.41
CSMD1-213ENST00000523488 DSPP15924 2871 aaKnown RBP6.26□□□□□ -1.41
CSMD1-213ENST00000523488 TRAV21A0A0B4J279 112 aa6.26□□□□□ -1.41
CSMD1-213ENST00000523488 RS1O15537 224 aa6.26□□□□□ -1.41
CSMD1-213ENST00000523488 RHOHQ15669 191 aa6.26□□□□□ -1.41
CSMD1-213ENST00000523488 C19orf54Q5BKX5 351 aa6.26□□□□□ -1.41
CSMD1-213ENST00000523488 DAND5Q8N907 189 aa6.26□□□□□ -1.41
CSMD1-213ENST00000523488 CENPEQ02224 2701 aa6.26□□□□□ -1.41
CSMD1-213ENST00000523488 USP9XQ93008 2570 aaPredicted RBP6.26□□□□□ -1.41
CSMD1-213ENST00000523488 TRAV13-1A0A0B4J241 112 aa6.26□□□□□ -1.41
CSMD1-213ENST00000523488 A0A1W2PNU3 283 aaPredicted RBP6.26□□□□□ -1.41
CSMD1-213ENST00000523488 ODF3BA8MYP8 253 aa6.26□□□□□ -1.41
CSMD1-213ENST00000523488 PRSS33Q8NF86 280 aa6.26□□□□□ -1.41
CSMD1-213ENST00000523488 FAM74A4Q5TZK3 123 aa6.25□□□□□ -1.41
CSMD1-213ENST00000523488 TMEM178BH3BS89 294 aa6.25□□□□□ -1.41
CSMD1-213ENST00000523488 I3L3M4 83 aa6.25□□□□□ -1.41
CSMD1-213ENST00000523488 TIMM21Q9BVV7 248 aa6.25□□□□□ -1.41
CSMD1-213ENST00000523488 POLQO75417 2590 aa6.25□□□□□ -1.41
CSMD1-213ENST00000523488 B9A039 149 aa6.25□□□□□ -1.41
CSMD1-213ENST00000523488 BUB3O43684 328 aa6.25□□□□□ -1.41
CSMD1-213ENST00000523488 DSCR8Q96T75 97 aa6.25□□□□□ -1.41
CSMD1-213ENST00000523488 RPL11P62913 178 aaKnown RBP6.24□□□□□ -1.41
CSMD1-213ENST00000523488 OPRPNQ99935 248 aaPredicted RBP6.24□□□□□ -1.41
CSMD1-213ENST00000523488 PYGO1Q9Y3Y4 419 aa6.24□□□□□ -1.41
CSMD1-213ENST00000523488 MUC3AQ02505 3323 aa6.24□□□□□ -1.41
CSMD1-213ENST00000523488 A0A0J9YXV3 536 aa6.24□□□□□ -1.41
CSMD1-213ENST00000523488 TMEM258P61165 79 aa6.24□□□□□ -1.41
CSMD1-213ENST00000523488 HIVEP3Q5T1R4 2406 aa6.24□□□□□ -1.41
CSMD1-213ENST00000523488 NDUFC2-KCTD14E9PQ53 114 aa6.24□□□□□ -1.41
CSMD1-213ENST00000523488 CTSGP08311 255 aa6.24□□□□□ -1.41
CSMD1-213ENST00000523488 C4orf26Q17RF5 130 aa6.24□□□□□ -1.41
CSMD1-213ENST00000523488 LINC01560Q8TB33 94 aa6.24□□□□□ -1.41
CSMD1-213ENST00000523488 NDUFA12Q9UI09 145 aa6.24□□□□□ -1.41
CSMD1-213ENST00000523488 EPG5Q9HCE0 2579 aa6.24□□□□□ -1.41
CSMD1-213ENST00000523488 LRRK2Q5S007 2527 aa6.23□□□□□ -1.41
CSMD1-213ENST00000523488 IGLV5-45A0A087WSX0 123 aa6.23□□□□□ -1.41
CSMD1-213ENST00000523488 C1orf43Q9BWL3 253 aa6.23□□□□□ -1.41
CSMD1-213ENST00000523488 A0A087WWL8 130 aa6.23□□□□□ -1.41
CSMD1-213ENST00000523488 LYNX1G3V0Z9 82 aa6.23□□□□□ -1.41
CSMD1-213ENST00000523488 LYNX1P0DP58 116 aa6.23□□□□□ -1.41
CSMD1-213ENST00000523488 Q6ZSV7 163 aa6.23□□□□□ -1.41
CSMD1-213ENST00000523488 KIR2DL5BQ8NHK3 375 aa6.23□□□□□ -1.41
CSMD1-213ENST00000523488 PRORYQ9H606 182 aa6.23□□□□□ -1.41
CSMD1-213ENST00000523488 BSNQ9UPA5 3926 aa6.23□□□□□ -1.41
CSMD1-213ENST00000523488 CCL21O00585 134 aa6.23□□□□□ -1.41
CSMD1-213ENST00000523488 ZFAND2AQ8N6M9 145 aa6.23□□□□□ -1.41
CSMD1-213ENST00000523488 PRRC2AP48634 2157 aaKnown RBP6.22□□□□□ -1.41
CSMD1-213ENST00000523488 GNRH2O43555 120 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms