RNA–Protein interactions for RNA: ENST00000523013.1

CLK4-213, Transcript of CDC like kinase 4, humanhuman

TSL 2

Gene CLK4, Length 735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-213ENST00000523013 LCN9Q8WX39 176 aa0.33□□□□□ -2.36
CLK4-213ENST00000523013 PSMF1Q92530 271 aa0.33□□□□□ -2.36
CLK4-213ENST00000523013 CHCHD1Q96BP2 118 aaKnown RBP0.33□□□□□ -2.36
CLK4-213ENST00000523013 BORCS8Q96FH0 119 aa0.33□□□□□ -2.36
CLK4-213ENST00000523013 C14orf144Q96I85 54 aa0.33□□□□□ -2.36
CLK4-213ENST00000523013 CIB3Q96Q77 187 aaPredicted RBP0.33□□□□□ -2.36
CLK4-213ENST00000523013 MRPL57Q9BQC6 102 aaKnown RBP0.33□□□□□ -2.36
CLK4-213ENST00000523013 LINC00467Q9BRT7 94 aa0.33□□□□□ -2.36
CLK4-213ENST00000523013 LXNQ9BS40 222 aa0.33□□□□□ -2.36
CLK4-213ENST00000523013 FAM103A1Q9BTL3 118 aaKnown RBP0.33□□□□□ -2.36
CLK4-213ENST00000523013 EFCAB11Q9BUY7 163 aa0.33□□□□□ -2.36
CLK4-213ENST00000523013 SNRNP25Q9BV90 132 aaKnown RBP0.33□□□□□ -2.36
CLK4-213ENST00000523013 SNHG12Q9BXW3 62 aa0.33□□□□□ -2.36
CLK4-213ENST00000523013 REG4Q9BYZ8 158 aa0.33□□□□□ -2.36
CLK4-213ENST00000523013 SMIM3Q9BZL3 60 aa0.33□□□□□ -2.36
CLK4-213ENST00000523013 ATG5Q9H1Y0 275 aa0.33□□□□□ -2.36
CLK4-213ENST00000523013 TCEAL2Q9H3H9 227 aaPredicted RBP0.33□□□□□ -2.36
CLK4-213ENST00000523013 TAF9BQ9HBM6 251 aa0.33□□□□□ -2.36
CLK4-213ENST00000523013 C14orf132Q9NPU4 83 aa0.33□□□□□ -2.36
CLK4-213ENST00000523013 MED9Q9NWA0 146 aa0.33□□□□□ -2.36
CLK4-213ENST00000523013 FKBP11Q9NYL4 201 aa0.33□□□□□ -2.36
CLK4-213ENST00000523013 TAS2R8Q9NYW2 309 aa0.33□□□□□ -2.36
CLK4-213ENST00000523013 OR5AC2Q9NZP5 309 aa0.33□□□□□ -2.36
CLK4-213ENST00000523013 GNG13Q9P2W3 67 aa0.33□□□□□ -2.36
CLK4-213ENST00000523013 METTL1Q9UBP6 276 aaKnown RBP0.33□□□□□ -2.36
CLK4-213ENST00000523013 UQCR10Q9UDW1 63 aa0.33□□□□□ -2.36
CLK4-213ENST00000523013 NAT8BQ9UHF3 227 aa0.33□□□□□ -2.36
CLK4-213ENST00000523013 ZFP30Q9Y2G7 519 aa0.33□□□□□ -2.36
CLK4-213ENST00000523013 TIMM8BQ9Y5J9 83 aaPredicted RBP0.33□□□□□ -2.36
CLK4-213ENST00000523013 HILPDAQ9Y5L2 63 aa0.33□□□□□ -2.36
CLK4-213ENST00000523013 LY96Q9Y6Y9 160 aa0.33□□□□□ -2.36
CLK4-213ENST00000523013 NUP210LQ5VU65 1888 aa0.33□□□□□ -2.36
CLK4-213ENST00000523013 ABCA1O95477 2261 aa0.33□□□□□ -2.36
CLK4-213ENST00000523013 ANKRD36A6QL64 1941 aa0.32□□□□□ -2.36
CLK4-213ENST00000523013 PTPRFP10586 1907 aa0.32□□□□□ -2.36
CLK4-213ENST00000523013 EML5Q05BV3 1969 aa0.32□□□□□ -2.36
CLK4-213ENST00000523013 XIRP1Q702N8 1843 aaKnown RBP0.32□□□□□ -2.36
CLK4-213ENST00000523013 MYO7AQ13402 2215 aa0.32□□□□□ -2.36
CLK4-213ENST00000523013 MED13LQ71F56 2210 aa0.32□□□□□ -2.36
CLK4-213ENST00000523013 TRAV36DV7A0A075B6V5 113 aa0.32□□□□□ -2.36
CLK4-213ENST00000523013 TRAV30A0A087WSZ9 112 aa0.32□□□□□ -2.36
CLK4-213ENST00000523013 TRAV27A0A087WT01 109 aa0.32□□□□□ -2.36
CLK4-213ENST00000523013 IGKV2D-26A0A0A0MRZ7 120 aa0.32□□□□□ -2.36
CLK4-213ENST00000523013 TRBV6-8A0A0A6YYG3 113 aa0.32□□□□□ -2.36
CLK4-213ENST00000523013 TRAV10A0A0B4J240 114 aa0.32□□□□□ -2.36
CLK4-213ENST00000523013 IGHV1-58A0A0C4DH39 117 aa0.32□□□□□ -2.36
CLK4-213ENST00000523013 A0A0G2JMM0 328 aa0.32□□□□□ -2.36
CLK4-213ENST00000523013 UBE2L5PA0A1B0GUS4 154 aa0.32□□□□□ -2.36
CLK4-213ENST00000523013 SPAARA0A1B0GVQ0 90 aa0.32□□□□□ -2.36
CLK4-213ENST00000523013 LOC285095A0A1B0GVY8 99 aa0.32□□□□□ -2.36
CLK4-213ENST00000523013 TRDV1A0A1B0GX56 115 aa0.32□□□□□ -2.36
CLK4-213ENST00000523013 A0A1W2PPB8 328 aa0.32□□□□□ -2.36
CLK4-213ENST00000523013 A0A1W2PRS3 328 aa0.32□□□□□ -2.36
CLK4-213ENST00000523013 C7orf77A4D0Y5 90 aa0.32□□□□□ -2.36
CLK4-213ENST00000523013 NAP1L6A6NFF2 107 aa0.32□□□□□ -2.36
CLK4-213ENST00000523013 OR2T8A6NH00 312 aa0.32□□□□□ -2.36
CLK4-213ENST00000523013 A6NIN4 97 aa0.32□□□□□ -2.36
CLK4-213ENST00000523013 CPSF4LA6NMK7 179 aaKnown RBP0.32□□□□□ -2.36
CLK4-213ENST00000523013 CEBPZOSA8MTT3 80 aa0.32□□□□□ -2.36
CLK4-213ENST00000523013 ZNF727A8MUV8 499 aa0.32□□□□□ -2.36
CLK4-213ENST00000523013 SNRPGP15A8MWD9 76 aa0.32□□□□□ -2.36
CLK4-213ENST00000523013 KIR3DP1A8MWS1 328 aa0.32□□□□□ -2.36
CLK4-213ENST00000523013 ZNF736B4DX44 427 aaPredicted RBP0.32□□□□□ -2.36
CLK4-213ENST00000523013 MCRIP1C9JLW8 97 aa0.32□□□□□ -2.36
CLK4-213ENST00000523013 TMEM262E9PQX1 116 aa0.32□□□□□ -2.36
CLK4-213ENST00000523013 C17orf112F2Z3M2 114 aa0.32□□□□□ -2.36
CLK4-213ENST00000523013 H3BQ15 152 aa0.32□□□□□ -2.36
CLK4-213ENST00000523013 H3BSH0 61 aa0.32□□□□□ -2.36
CLK4-213ENST00000523013 H3BVH4 76 aa0.32□□□□□ -2.36
CLK4-213ENST00000523013 GABARAPH6UMI1 98 aa0.32□□□□□ -2.36
CLK4-213ENST00000523013 J3QLW9 94 aa0.32□□□□□ -2.36
CLK4-213ENST00000523013 K7EP13 123 aa0.32□□□□□ -2.36
CLK4-213ENST00000523013 K7ERJ3 54 aa0.32□□□□□ -2.36
CLK4-213ENST00000523013 M0R2Z0 102 aa0.32□□□□□ -2.36
CLK4-213ENST00000523013 FXYD1O00168 92 aa0.32□□□□□ -2.36
CLK4-213ENST00000523013 CCL22O00626 93 aa0.32□□□□□ -2.36
CLK4-213ENST00000523013 SSSCA1O60232 199 aa0.32□□□□□ -2.36
CLK4-213ENST00000523013 HIST1H2BKO60814 126 aa0.32□□□□□ -2.36
CLK4-213ENST00000523013 HYPMO75409 117 aa0.32□□□□□ -2.36
CLK4-213ENST00000523013 NDUFB6O95139 128 aa0.32□□□□□ -2.36
CLK4-213ENST00000523013 TNFSF15O95150 251 aa0.32□□□□□ -2.36
CLK4-213ENST00000523013 SFT2D2O95562 160 aa0.32□□□□□ -2.36
CLK4-213ENST00000523013 MT-ND6P03923 174 aa0.32□□□□□ -2.36
CLK4-213ENST00000523013 CD3DP04234 171 aa0.32□□□□□ -2.36
CLK4-213ENST00000523013 APODP05090 189 aa0.32□□□□□ -2.36
CLK4-213ENST00000523013 HIST1H2BJP06899 126 aa0.32□□□□□ -2.36
CLK4-213ENST00000523013 DBIP07108 87 aaKnown RBP0.32□□□□□ -2.36
CLK4-213ENST00000523013 CD14P08571 375 aa0.32□□□□□ -2.36
CLK4-213ENST00000523013 OR10J4P0C629 311 aa0.32□□□□□ -2.36
CLK4-213ENST00000523013 LINC00032P0C843 101 aa0.32□□□□□ -2.36
CLK4-213ENST00000523013 AKAIN1P0CW23 69 aa0.32□□□□□ -2.36
CLK4-213ENST00000523013 SCGB1A1P11684 91 aa0.32□□□□□ -2.36
CLK4-213ENST00000523013 FABP2P12104 132 aa0.32□□□□□ -2.36
CLK4-213ENST00000523013 PIPP12273 146 aaPredicted RBP0.32□□□□□ -2.36
CLK4-213ENST00000523013 HIST1H1BP16401 226 aaKnown RBP0.32□□□□□ -2.36
CLK4-213ENST00000523013 HIST1H1DP16402 221 aaKnown RBP0.32□□□□□ -2.36
CLK4-213ENST00000523013 CBLN1P23435 193 aa0.32□□□□□ -2.36
CLK4-213ENST00000523013 BRS3P32247 399 aa0.32□□□□□ -2.36
CLK4-213ENST00000523013 S100A3P33764 101 aa0.32□□□□□ -2.36
CLK4-213ENST00000523013 RPL22P35268 128 aaKnown RBP0.32□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms