RNA–Protein interactions for RNA: ENST00000521640.5

CTNNA1-228, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-228ENST00000521640 CHD6Q8TD26 2715 aa4.89□□□□□ -1.63
CTNNA1-228ENST00000521640 PDZD2O15018 2839 aa4.89□□□□□ -1.63
CTNNA1-228ENST00000521640 KNCNA6PVL3 124 aa4.89□□□□□ -1.63
CTNNA1-228ENST00000521640 OR11H12B2RN74 326 aa4.89□□□□□ -1.63
CTNNA1-228ENST00000521640 F8VRH5 84 aa4.89□□□□□ -1.63
CTNNA1-228ENST00000521640 M0QY20 66 aa4.89□□□□□ -1.63
CTNNA1-228ENST00000521640 IGKV3-20P01619 116 aa4.89□□□□□ -1.63
CTNNA1-228ENST00000521640 IGLV1-51P01701 117 aa4.89□□□□□ -1.63
CTNNA1-228ENST00000521640 PRSS1P07477 247 aa4.89□□□□□ -1.63
CTNNA1-228ENST00000521640 RBMY1A1P0DJD3 496 aaKnown RBP4.89□□□□□ -1.63
CTNNA1-228ENST00000521640 RBMY1CP0DJD4 496 aa4.89□□□□□ -1.63
CTNNA1-228ENST00000521640 RBMY1FQ15415 496 aaKnown RBP4.89□□□□□ -1.63
CTNNA1-228ENST00000521640 BEAN1Q3B7T3 259 aa4.89□□□□□ -1.63
CTNNA1-228ENST00000521640 ZNF876PQ49A33 203 aa4.89□□□□□ -1.63
CTNNA1-228ENST00000521640 BOD1L2Q8IYS8 172 aa4.89□□□□□ -1.63
CTNNA1-228ENST00000521640 RPL39LQ96EH5 51 aaKnown RBP4.89□□□□□ -1.63
CTNNA1-228ENST00000521640 TMEM141Q96I45 108 aa4.89□□□□□ -1.63
CTNNA1-228ENST00000521640 CSTL1Q9H114 145 aa4.89□□□□□ -1.63
CTNNA1-228ENST00000521640 MDFICQ9P1T7 246 aa4.89□□□□□ -1.63
CTNNA1-228ENST00000521640 CYSLTR1Q9Y271 337 aa4.89□□□□□ -1.63
CTNNA1-228ENST00000521640 CENPEQ02224 2701 aa4.89□□□□□ -1.63
CTNNA1-228ENST00000521640 ZANQ9Y493 2812 aa4.88□□□□□ -1.63
CTNNA1-228ENST00000521640 CELSR1Q9NYQ6 3014 aa4.88□□□□□ -1.63
CTNNA1-228ENST00000521640 A0A1B0GV90 55 aa4.88□□□□□ -1.63
CTNNA1-228ENST00000521640 H0Y8G0 127 aa4.88□□□□□ -1.63
CTNNA1-228ENST00000521640 CIDEAO60543 219 aa4.88□□□□□ -1.63
CTNNA1-228ENST00000521640 FGF6P10767 208 aa4.88□□□□□ -1.63
CTNNA1-228ENST00000521640 CRYBA4P53673 196 aa4.88□□□□□ -1.63
CTNNA1-228ENST00000521640 UFSP1Q6NVU6 142 aa4.88□□□□□ -1.63
CTNNA1-228ENST00000521640 MORN3Q6PF18 240 aaPredicted RBP4.88□□□□□ -1.63
CTNNA1-228ENST00000521640 C2orf66Q6UXQ4 117 aa4.88□□□□□ -1.63
CTNNA1-228ENST00000521640 ZFP2Q6ZN57 461 aa4.88□□□□□ -1.63
CTNNA1-228ENST00000521640 STHQ8IWL8 128 aa4.88□□□□□ -1.63
CTNNA1-228ENST00000521640 C11orf72Q8NBR9 251 aa4.88□□□□□ -1.63
CTNNA1-228ENST00000521640 NEXN-AS1Q8NBZ9 246 aa4.88□□□□□ -1.63
CTNNA1-228ENST00000521640 DNAJC30Q96LL9 226 aa4.88□□□□□ -1.63
CTNNA1-228ENST00000521640 C18orf15Q96N68 181 aa4.88□□□□□ -1.63
CTNNA1-228ENST00000521640 DUX3Q96PT4 197 aa4.88□□□□□ -1.63
CTNNA1-228ENST00000521640 SCGB3A1Q96QR1 104 aa4.88□□□□□ -1.63
CTNNA1-228ENST00000521640 C1QTNF4Q9BXJ3 329 aa4.88□□□□□ -1.63
CTNNA1-228ENST00000521640 HIGD1BQ9P298 99 aa4.88□□□□□ -1.63
CTNNA1-228ENST00000521640 HHLA3Q9XRX5 114 aa4.88□□□□□ -1.63
CTNNA1-228ENST00000521640 TENM4Q6N022 2769 aa4.88□□□□□ -1.63
CTNNA1-228ENST00000521640 TEX15Q9BXT5 2789 aa4.87□□□□□ -1.63
CTNNA1-228ENST00000521640 FLNAP21333 2647 aaKnown RBP4.87□□□□□ -1.63
CTNNA1-228ENST00000521640 UNC79Q9P2D8 2635 aa4.87□□□□□ -1.63
CTNNA1-228ENST00000521640 SDHAF1A6NFY7 115 aa4.87□□□□□ -1.63
CTNNA1-228ENST00000521640 F5H697 171 aa4.87□□□□□ -1.63
CTNNA1-228ENST00000521640 I3L3M4 83 aa4.87□□□□□ -1.63
CTNNA1-228ENST00000521640 LY6G6DO95868 133 aa4.87□□□□□ -1.63
CTNNA1-228ENST00000521640 INSL3P51460 131 aa4.87□□□□□ -1.63
CTNNA1-228ENST00000521640 SEC11AP67812 179 aa4.87□□□□□ -1.63
CTNNA1-228ENST00000521640 GAGE1Q13065 139 aa4.87□□□□□ -1.63
CTNNA1-228ENST00000521640 FHL2Q14192 279 aa4.87□□□□□ -1.63
CTNNA1-228ENST00000521640 ZNF56Q15929 161 aa4.87□□□□□ -1.63
CTNNA1-228ENST00000521640 DKK2Q9UBU2 259 aa4.87□□□□□ -1.63
CTNNA1-228ENST00000521640 ZMAT5Q9UDW3 170 aaKnown RBP4.87□□□□□ -1.63
CTNNA1-228ENST00000521640 SELENOKQ9Y6D0 94 aa4.87□□□□□ -1.63
CTNNA1-228ENST00000521640 MXRA5Q9NR99 2828 aa4.87□□□□□ -1.63
CTNNA1-228ENST00000521640 CSMD1Q96PZ7 3565 aa4.86□□□□□ -1.63
CTNNA1-228ENST00000521640 IGIPA6NJ69 53 aa4.86□□□□□ -1.63
CTNNA1-228ENST00000521640 RS1O15537 224 aa4.86□□□□□ -1.63
CTNNA1-228ENST00000521640 IGHV3-53P01767 116 aa4.86□□□□□ -1.63
CTNNA1-228ENST00000521640 FXYD7P58549 80 aa4.86□□□□□ -1.63
CTNNA1-228ENST00000521640 HSD52Q0P140 79 aa4.86□□□□□ -1.63
CTNNA1-228ENST00000521640 C2orf91Q6ZV80 131 aa4.86□□□□□ -1.63
CTNNA1-228ENST00000521640 TMEM263Q8WUH6 116 aaKnown RBP4.86□□□□□ -1.63
CTNNA1-228ENST00000521640 BAALCQ8WXS3 180 aa4.86□□□□□ -1.63
CTNNA1-228ENST00000521640 LINC01587Q99440 93 aa4.86□□□□□ -1.63
CTNNA1-228ENST00000521640 MCRIP2Q9BUT9 160 aaKnown RBP4.86□□□□□ -1.63
CTNNA1-228ENST00000521640 JPT2Q9H910 190 aa4.86□□□□□ -1.63
CTNNA1-228ENST00000521640 MRPL35Q9NZE8 188 aaKnown RBP4.86□□□□□ -1.63
CTNNA1-228ENST00000521640 CHTOPQ9Y3Y2 248 aaKnown RBP4.86□□□□□ -1.63
CTNNA1-228ENST00000521640 PYGO1Q9Y3Y4 419 aa4.86□□□□□ -1.63
CTNNA1-228ENST00000521640 MYO9AB2RTY4 2548 aa4.86□□□□□ -1.63
CTNNA1-228ENST00000521640 VPS13CQ709C8 3753 aa4.85□□□□□ -1.63
CTNNA1-228ENST00000521640 HELZ2Q9BYK8 2649 aaKnown RBP4.85□□□□□ -1.63
CTNNA1-228ENST00000521640 TRBV10-1A0A0K0K1A3 114 aa4.85□□□□□ -1.63
CTNNA1-228ENST00000521640 SAP30O75446 220 aa4.85□□□□□ -1.63
CTNNA1-228ENST00000521640 DAZ2Q13117 558 aaKnown RBP4.85□□□□□ -1.63
CTNNA1-228ENST00000521640 PMVKQ15126 192 aa4.85□□□□□ -1.63
CTNNA1-228ENST00000521640 TAL2Q16559 108 aa4.85□□□□□ -1.63
CTNNA1-228ENST00000521640 TMEM97Q5BJF2 176 aa4.85□□□□□ -1.63
CTNNA1-228ENST00000521640 BVES-AS1Q5T3Y7 98 aa4.85□□□□□ -1.63
CTNNA1-228ENST00000521640 ZC2HC1BQ5TFG8 222 aa4.85□□□□□ -1.63
CTNNA1-228ENST00000521640 FAM74A4Q5TZK3 123 aa4.85□□□□□ -1.63
CTNNA1-228ENST00000521640 LINC00469Q8N7U9 141 aa4.85□□□□□ -1.63
CTNNA1-228ENST00000521640 C20orf203Q8NBC4 194 aa4.85□□□□□ -1.63
CTNNA1-228ENST00000521640 RNASE8Q8TDE3 154 aaKnown RBP4.85□□□□□ -1.63
CTNNA1-228ENST00000521640 ORAOV1Q8WV07 137 aa4.85□□□□□ -1.63
CTNNA1-228ENST00000521640 TP53TG1Q9Y2A0 90 aa4.85□□□□□ -1.63
CTNNA1-228ENST00000521640 CSMD2Q7Z408 3487 aa4.85□□□□□ -1.63
CTNNA1-228ENST00000521640 CCDC168Q8NDH2 2452 aa4.84□□□□□ -1.63
CTNNA1-228ENST00000521640 E9PLD3 99 aa4.84□□□□□ -1.63
CTNNA1-228ENST00000521640 SPRY2O43597 315 aa4.84□□□□□ -1.63
CTNNA1-228ENST00000521640 TSHBP01222 138 aa4.84□□□□□ -1.63
CTNNA1-228ENST00000521640 HERVK_113P61574 105 aa4.84□□□□□ -1.63
CTNNA1-228ENST00000521640 MPV17L2Q567V2 206 aa4.84□□□□□ -1.63
CTNNA1-228ENST00000521640 CFAP126Q5VTH2 177 aa4.84□□□□□ -1.63
CTNNA1-228ENST00000521640 NFE4Q86UQ8 179 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms