RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 KLLNB2CW77 178 aa7.57□□□□□ -1.2
MCF2-209ENST00000520602 ZNF479Q96JC4 524 aa7.57□□□□□ -1.2
MCF2-209ENST00000520602 OPRPNQ99935 248 aaPredicted RBP7.57□□□□□ -1.2
MCF2-209ENST00000520602 TSSC4Q9Y5U2 329 aaPredicted RBP7.57□□□□□ -1.2
MCF2-209ENST00000520602 CCL25O15444 150 aa7.57□□□□□ -1.2
MCF2-209ENST00000520602 P0DMU3 169 aa7.57□□□□□ -1.2
MCF2-209ENST00000520602 FAM231AP0DMU4 169 aa7.57□□□□□ -1.2
MCF2-209ENST00000520602 FAM231CP0DMU5 169 aa7.57□□□□□ -1.2
MCF2-209ENST00000520602 AZU1P20160 251 aa7.57□□□□□ -1.2
MCF2-209ENST00000520602 ZNRF2Q8NHG8 242 aa7.57□□□□□ -1.2
MCF2-209ENST00000520602 H3BMM0 161 aa7.56□□□□□ -1.2
MCF2-209ENST00000520602 C21orf62-AS1Q17RA5 79 aa7.56□□□□□ -1.2
MCF2-209ENST00000520602 BAALCQ8WXS3 180 aa7.56□□□□□ -1.2
MCF2-209ENST00000520602 MAP6D1Q9H9H5 199 aa7.56□□□□□ -1.2
MCF2-209ENST00000520602 ITPR3Q14573 2671 aa7.56□□□□□ -1.2
MCF2-209ENST00000520602 MYMXA0A1B0GTQ4 84 aa7.56□□□□□ -1.2
MCF2-209ENST00000520602 TOMM6Q96B49 74 aa7.56□□□□□ -1.2
MCF2-209ENST00000520602 TMEM141Q96I45 108 aa7.56□□□□□ -1.2
MCF2-209ENST00000520602 J3QR89 54 aa7.56□□□□□ -1.2
MCF2-209ENST00000520602 DEFB130BP0DP73 79 aa7.56□□□□□ -1.2
MCF2-209ENST00000520602 DEFB130AP0DP74 79 aa7.56□□□□□ -1.2
MCF2-209ENST00000520602 RPL36AP83881 106 aaKnown RBP7.56□□□□□ -1.2
MCF2-209ENST00000520602 RPL36ALQ969Q0 106 aaKnown RBP7.56□□□□□ -1.2
MCF2-209ENST00000520602 GAGE12BA1L429 117 aa7.55□□□□□ -1.2
MCF2-209ENST00000520602 GAGE12JA6NER3 117 aa7.55□□□□□ -1.2
MCF2-209ENST00000520602 K7EP13 123 aa7.55□□□□□ -1.2
MCF2-209ENST00000520602 TAX1BP3O14907 124 aa7.55□□□□□ -1.2
MCF2-209ENST00000520602 GAGE7O76087 117 aa7.55□□□□□ -1.2
MCF2-209ENST00000520602 GAGE12FP0CL80 117 aa7.55□□□□□ -1.2
MCF2-209ENST00000520602 GAGE12GP0CL81 117 aa7.55□□□□□ -1.2
MCF2-209ENST00000520602 GAGE12IP0CL82 117 aa7.55□□□□□ -1.2
MCF2-209ENST00000520602 GAGE1Q13065 139 aa7.55□□□□□ -1.2
MCF2-209ENST00000520602 GAGE4Q13068 117 aa7.55□□□□□ -1.2
MCF2-209ENST00000520602 GAGE5Q13069 117 aa7.55□□□□□ -1.2
MCF2-209ENST00000520602 DEFB114Q30KQ6 69 aa7.55□□□□□ -1.2
MCF2-209ENST00000520602 GAGE13Q4V321 117 aa7.55□□□□□ -1.2
MCF2-209ENST00000520602 IGHV4-4A0A075B6R2 117 aa7.55□□□□□ -1.2
MCF2-209ENST00000520602 TMEM262E9PQX1 116 aa7.55□□□□□ -1.2
MCF2-209ENST00000520602 DCHS2Q6V1P9 2916 aa7.55□□□□□ -1.2
MCF2-209ENST00000520602 H3BRM9 83 aa7.55□□□□□ -1.2
MCF2-209ENST00000520602 RHODO00212 210 aa7.55□□□□□ -1.2
MCF2-209ENST00000520602 FLNBO75369 2602 aaKnown RBP7.54□□□□□ -1.2
MCF2-209ENST00000520602 BRI3O95415 125 aa7.54□□□□□ -1.2
MCF2-209ENST00000520602 FXYD2P54710 66 aa7.54□□□□□ -1.2
MCF2-209ENST00000520602 NPC2P61916 151 aa7.54□□□□□ -1.2
MCF2-209ENST00000520602 ITPR1Q14643 2758 aa7.54□□□□□ -1.2
MCF2-209ENST00000520602 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.54□□□□□ -1.2
MCF2-209ENST00000520602 TRAV13-1A0A0B4J241 112 aa7.54□□□□□ -1.2
MCF2-209ENST00000520602 IGKV2-29A2NJV5 120 aaPredicted RBP7.54□□□□□ -1.2
MCF2-209ENST00000520602 C9orf118A6NHY6 69 aa7.54□□□□□ -1.2
MCF2-209ENST00000520602 SIVA1O15304 175 aa7.54□□□□□ -1.2
MCF2-209ENST00000520602 PROK1P58294 105 aa7.54□□□□□ -1.2
MCF2-209ENST00000520602 LYRM7Q5U5X0 104 aa7.54□□□□□ -1.2
MCF2-209ENST00000520602 NOP10Q9NPE3 64 aaKnown RBP7.54□□□□□ -1.2
MCF2-209ENST00000520602 ADARB2-AS1A8MUL3 147 aa7.53□□□□□ -1.2
MCF2-209ENST00000520602 MEIG1Q5JSS6 88 aa7.53□□□□□ -1.2
MCF2-209ENST00000520602 TOMM7Q9P0U1 55 aa7.53□□□□□ -1.2
MCF2-209ENST00000520602 A0A0J9YXV3 536 aa7.53□□□□□ -1.2
MCF2-209ENST00000520602 C11orf86A6NJI1 115 aa7.53□□□□□ -1.2
MCF2-209ENST00000520602 HTN3P15516 51 aa7.53□□□□□ -1.2
MCF2-209ENST00000520602 CEND1Q8N111 149 aa7.53□□□□□ -1.2
MCF2-209ENST00000520602 CRYBG3Q68DQ2 2970 aa7.53□□□□□ -1.2
MCF2-209ENST00000520602 CMC4P56277 68 aaPredicted RBP7.53□□□□□ -1.2
MCF2-209ENST00000520602 CEMP1Q6PRD7 247 aaPredicted RBP7.53□□□□□ -1.2
MCF2-209ENST00000520602 TMEM101Q96IK0 257 aa7.53□□□□□ -1.2
MCF2-209ENST00000520602 MTURNQ8N3F0 131 aa7.52□□□□□ -1.21
MCF2-209ENST00000520602 ODF3Q96PU9 254 aa7.52□□□□□ -1.21
MCF2-209ENST00000520602 CHCHD5Q9BSY4 110 aa7.52□□□□□ -1.21
MCF2-209ENST00000520602 C2orf91Q6ZV80 131 aa7.52□□□□□ -1.21
MCF2-209ENST00000520602 TMEM86BQ8N661 226 aa7.52□□□□□ -1.21
MCF2-209ENST00000520602 C1QTNF4Q9BXJ3 329 aa7.52□□□□□ -1.21
MCF2-209ENST00000520602 PGPEP1Q9NXJ5 209 aa7.52□□□□□ -1.21
MCF2-209ENST00000520602 HELZ2Q9BYK8 2649 aaKnown RBP7.52□□□□□ -1.21
MCF2-209ENST00000520602 SMAGPQ0VAQ4 97 aa7.52□□□□□ -1.21
MCF2-209ENST00000520602 SMR3AQ99954 134 aa7.52□□□□□ -1.21
MCF2-209ENST00000520602 TIMM21Q9BVV7 248 aa7.52□□□□□ -1.21
MCF2-209ENST00000520602 TRAV12-1A0A0B4J245 112 aa7.51□□□□□ -1.21
MCF2-209ENST00000520602 KLK9Q2XQG4 91 aa7.51□□□□□ -1.21
MCF2-209ENST00000520602 MAPKAPK5-AS1Q8N8E1 139 aa7.51□□□□□ -1.21
MCF2-209ENST00000520602 CST9LQ9H4G1 147 aa7.51□□□□□ -1.21
MCF2-209ENST00000520602 J3QQQ9 107 aa7.51□□□□□ -1.21
MCF2-209ENST00000520602 M0QY20 66 aa7.51□□□□□ -1.21
MCF2-209ENST00000520602 RHOHQ15669 191 aa7.51□□□□□ -1.21
MCF2-209ENST00000520602 ZNF625Q96I27 306 aaPredicted RBP7.51□□□□□ -1.21
MCF2-209ENST00000520602 TEX15Q9BXT5 2789 aa7.51□□□□□ -1.21
MCF2-209ENST00000520602 A0A1B0GWB2 263 aa7.51□□□□□ -1.21
MCF2-209ENST00000520602 CIRBPQ14011 172 aaKnown RBP7.51□□□□□ -1.21
MCF2-209ENST00000520602 UTP20O75691 2785 aaKnown RBP7.51□□□□□ -1.21
MCF2-209ENST00000520602 LINC01006Q8NI28 216 aa7.5□□□□□ -1.21
MCF2-209ENST00000520602 CRYGDP07320 174 aa7.5□□□□□ -1.21
MCF2-209ENST00000520602 NEXN-AS1Q8NBZ9 246 aa7.5□□□□□ -1.21
MCF2-209ENST00000520602 PLEKHB2Q96CS7 222 aa7.5□□□□□ -1.21
MCF2-209ENST00000520602 ZANQ9Y493 2812 aa7.5□□□□□ -1.21
MCF2-209ENST00000520602 AMTNQ6UX39 209 aa7.5□□□□□ -1.21
MCF2-209ENST00000520602 OR5A1Q8NGJ0 315 aa7.5□□□□□ -1.21
MCF2-209ENST00000520602 IGLV2-18A0A075B6J9 118 aa7.49□□□□□ -1.21
MCF2-209ENST00000520602 C20orf203Q8NBC4 194 aa7.49□□□□□ -1.21
MCF2-209ENST00000520602 ZNF580Q9UK33 172 aa7.49□□□□□ -1.21
MCF2-209ENST00000520602 HHLA3Q9XRX5 114 aa7.49□□□□□ -1.21
MCF2-209ENST00000520602 A0A1W2PPM0 123 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms