RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 A0A096LPF7 62 aa12.39□□□□□ -0.43
SDC2-205ENST00000520233 NUDT3O95989 172 aa12.39□□□□□ -0.43
SDC2-205ENST00000520233 PPBPP02775 128 aa12.39□□□□□ -0.43
SDC2-205ENST00000520233 CKS2P33552 79 aa12.39□□□□□ -0.43
SDC2-205ENST00000520233 RPL36AP83881 106 aaKnown RBP12.39□□□□□ -0.43
SDC2-205ENST00000520233 RPL36ALQ969Q0 106 aaKnown RBP12.39□□□□□ -0.43
SDC2-205ENST00000520233 APLNQ9ULZ1 77 aa12.39□□□□□ -0.43
SDC2-205ENST00000520233 GAGE12JA6NER3 117 aa12.38□□□□□ -0.43
SDC2-205ENST00000520233 COLCA2A8K830 154 aa12.38□□□□□ -0.43
SDC2-205ENST00000520233 APCSP02743 223 aa12.38□□□□□ -0.43
SDC2-205ENST00000520233 LINC00694P0DN24 101 aa12.38□□□□□ -0.43
SDC2-205ENST00000520233 GAGE1Q13065 139 aa12.38□□□□□ -0.43
SDC2-205ENST00000520233 GAGE4Q13068 117 aa12.38□□□□□ -0.43
SDC2-205ENST00000520233 GAGE5Q13069 117 aa12.38□□□□□ -0.43
SDC2-205ENST00000520233 GAGE13Q4V321 117 aa12.38□□□□□ -0.43
SDC2-205ENST00000520233 CASC10Q5T4H9 136 aa12.38□□□□□ -0.43
SDC2-205ENST00000520233 ZNRF2Q8NHG8 242 aa12.38□□□□□ -0.43
SDC2-205ENST00000520233 TRBV7-3A0A075B6L6 115 aa12.37□□□□□ -0.43
SDC2-205ENST00000520233 D6R8Y8 96 aa12.37□□□□□ -0.43
SDC2-205ENST00000520233 SMKR1H3BMG3 65 aa12.37□□□□□ -0.43
SDC2-205ENST00000520233 GAS8-AS1O95177 125 aa12.37□□□□□ -0.43
SDC2-205ENST00000520233 NCR2O95944 276 aa12.37□□□□□ -0.43
SDC2-205ENST00000520233 PPP1R17O96001 155 aa12.37□□□□□ -0.43
SDC2-205ENST00000520233 SRIP30626 198 aa12.37□□□□□ -0.43
SDC2-205ENST00000520233 SH2D6Q7Z4S9 175 aa12.37□□□□□ -0.43
SDC2-205ENST00000520233 RPL39LQ96EH5 51 aaKnown RBP12.37□□□□□ -0.43
SDC2-205ENST00000520233 TNFRSF18Q9Y5U5 241 aa12.37□□□□□ -0.43
SDC2-205ENST00000520233 TRBV6-5A0A0K0K1A5 114 aa12.36□□□□□ -0.43
SDC2-205ENST00000520233 OR10J3Q5JRS4 329 aa12.36□□□□□ -0.43
SDC2-205ENST00000520233 ORMDL3Q8N138 153 aa12.36□□□□□ -0.43
SDC2-205ENST00000520233 MRPL18Q9H0U6 180 aaKnown RBP12.36□□□□□ -0.43
SDC2-205ENST00000520233 TRAPPC1Q9Y5R8 145 aa12.36□□□□□ -0.43
SDC2-205ENST00000520233 RPS10P46783 165 aaKnown RBP12.35□□□□□ -0.43
SDC2-205ENST00000520233 UBE2D3P61077 147 aa12.35□□□□□ -0.43
SDC2-205ENST00000520233 UBE2D2P62837 147 aa12.35□□□□□ -0.43
SDC2-205ENST00000520233 NEGR1Q7Z3B1 354 aa12.35□□□□□ -0.43
SDC2-205ENST00000520233 NRACQ8N912 160 aa12.35□□□□□ -0.43
SDC2-205ENST00000520233 FABP9Q0Z7S8 132 aa12.34□□□□□ -0.43
SDC2-205ENST00000520233 ATP6V0E2Q8NHE4 81 aa12.34□□□□□ -0.43
SDC2-205ENST00000520233 PRELID3AQ96N28 172 aa12.34□□□□□ -0.43
SDC2-205ENST00000520233 PHOX2AO14813 284 aa12.33□□□□□ -0.44
SDC2-205ENST00000520233 TNFRSF6BO95407 300 aa12.33□□□□□ -0.44
SDC2-205ENST00000520233 RAB5AP20339 215 aa12.33□□□□□ -0.44
SDC2-205ENST00000520233 KIAA1644Q3SXP7 199 aa12.33□□□□□ -0.44
SDC2-205ENST00000520233 ST20Q9HBF5 79 aa12.33□□□□□ -0.44
SDC2-205ENST00000520233 LAMTOR2Q9Y2Q5 125 aa12.33□□□□□ -0.44
SDC2-205ENST00000520233 DAZ4Q86SG3 579 aaKnown RBP12.32□□□□□ -0.44
SDC2-205ENST00000520233 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.32□□□□□ -0.44
SDC2-205ENST00000520233 C20orf78Q9BR46 151 aa12.32□□□□□ -0.44
SDC2-205ENST00000520233 DAZ3Q9NR90 486 aaKnown RBP12.32□□□□□ -0.44
SDC2-205ENST00000520233 SDHAF1A6NFY7 115 aa12.31□□□□□ -0.44
SDC2-205ENST00000520233 NPYP01303 97 aa12.31□□□□□ -0.44
SDC2-205ENST00000520233 SUMO2P61956 95 aaKnown RBP12.31□□□□□ -0.44
SDC2-205ENST00000520233 POLR2KP53803 58 aaKnown RBP12.3□□□□□ -0.44
SDC2-205ENST00000520233 TIRAPP58753 221 aa12.3□□□□□ -0.44
SDC2-205ENST00000520233 LYPD5Q6UWN5 251 aa12.3□□□□□ -0.44
SDC2-205ENST00000520233 ALKBH7Q9BT30 221 aaPredicted RBP12.3□□□□□ -0.44
SDC2-205ENST00000520233 GTSF1LQ9H1H1 148 aa12.3□□□□□ -0.44
SDC2-205ENST00000520233 DNAH7Q8WXX0 4024 aa12.29□□□□□ -0.44
SDC2-205ENST00000520233 RPL32P62910 135 aaKnown RBP12.29□□□□□ -0.44
SDC2-205ENST00000520233 ESRGQ1W209 222 aa12.29□□□□□ -0.44
SDC2-205ENST00000520233 TMEM70Q9BUB7 260 aa12.29□□□□□ -0.44
SDC2-205ENST00000520233 IGHV3-38A0A0C4DH36 116 aa12.28□□□□□ -0.44
SDC2-205ENST00000520233 PRSS47A8MTI9 375 aa12.28□□□□□ -0.44
SDC2-205ENST00000520233 CCL18P55774 89 aa12.28□□□□□ -0.44
SDC2-205ENST00000520233 TMEM97Q5BJF2 176 aa12.28□□□□□ -0.44
SDC2-205ENST00000520233 TRBV27A0A0K0K1C4 114 aa12.27□□□□□ -0.45
SDC2-205ENST00000520233 I3L3M4 83 aa12.27□□□□□ -0.45
SDC2-205ENST00000520233 VCYO14598 125 aa12.27□□□□□ -0.45
SDC2-205ENST00000520233 TRGC2P03986 189 aa12.27□□□□□ -0.45
SDC2-205ENST00000520233 SMIM2Q9BVW6 85 aa12.27□□□□□ -0.45
SDC2-205ENST00000520233 MAP1LC3AQ9H492 121 aa12.27□□□□□ -0.45
SDC2-205ENST00000520233 PMCHP20382 165 aa12.26□□□□□ -0.45
SDC2-205ENST00000520233 COTL1Q14019 142 aa12.25□□□□□ -0.45
SDC2-205ENST00000520233 LELP1Q5T871 98 aa12.25□□□□□ -0.45
SDC2-205ENST00000520233 LINC00588Q9Y4M8 146 aa12.25□□□□□ -0.45
SDC2-205ENST00000520233 TRBV6-8A0A0A6YYG3 113 aa12.24□□□□□ -0.45
SDC2-205ENST00000520233 NTM-AS1Q6ZSK4 140 aa12.24□□□□□ -0.45
SDC2-205ENST00000520233 KIR2DL4Q99706 377 aa12.24□□□□□ -0.45
SDC2-205ENST00000520233 MRPS16Q9Y3D3 137 aaKnown RBP12.24□□□□□ -0.45
SDC2-205ENST00000520233 LOC389332A0A1B0GUA5 103 aa12.23□□□□□ -0.45
SDC2-205ENST00000520233 IGLV2-18A0A075B6J9 118 aa12.22□□□□□ -0.45
SDC2-205ENST00000520233 TSHBP01222 138 aa12.22□□□□□ -0.45
SDC2-205ENST00000520233 LGALS9CQ6DKI2 356 aa12.22□□□□□ -0.45
SDC2-205ENST00000520233 UBE2DNLQ8IWF7 75 aa12.22□□□□□ -0.45
SDC2-205ENST00000520233 DEFB104AQ8WTQ1 72 aa12.22□□□□□ -0.45
SDC2-205ENST00000520233 TRBV25-1A0A075B6N4 114 aa12.21□□□□□ -0.45
SDC2-205ENST00000520233 TRAV8-6A0A0B4J262 113 aa12.21□□□□□ -0.45
SDC2-205ENST00000520233 IGHV1-24A0A0C4DH33 117 aa12.21□□□□□ -0.45
SDC2-205ENST00000520233 TCAPO15273 167 aa12.21□□□□□ -0.45
SDC2-205ENST00000520233 IQCJQ1A5X6 159 aa12.21□□□□□ -0.45
SDC2-205ENST00000520233 Q8N8P6 123 aa12.21□□□□□ -0.45
SDC2-205ENST00000520233 C18orf32Q8TCD1 76 aa12.21□□□□□ -0.45
SDC2-205ENST00000520233 UPK3BQ9BT76 320 aa12.21□□□□□ -0.45
SDC2-205ENST00000520233 NXT2Q9NPJ8 142 aaKnown RBP12.21□□□□□ -0.45
SDC2-205ENST00000520233 CSMD3Q7Z407 3707 aa12.21□□□□□ -0.45
SDC2-205ENST00000520233 FCER1GP30273 86 aa12.2□□□□□ -0.46
SDC2-205ENST00000520233 IFI27P40305 119 aaPredicted RBP12.2□□□□□ -0.46
SDC2-205ENST00000520233 AMTP48728 403 aa12.2□□□□□ -0.46
SDC2-205ENST00000520233 STARD9Q9P2P6 4700 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms